Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20naardenensis_20[genbank_20GCA_5F001753995.1_202016-
10-07] 76 sequences; 11,283,072 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq23 114 1e-20
>seq23
Length=838141
Score = 114 bits (126), Expect = 1e-20
Identities = 558/874 (64%), Gaps = 29/874 (3%)
Strand=Plus/Plus
Query 43696 TAGGTTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACA 43755
||| |||||| |||| || || ||||| |||| || ||||| |||||||| || || |
Sbjct 742154 TAGATTTGTCATGTTCCCTATCCAATACGATGATATTTGGCAGATGTACAAGAAGGCTGA 742213
Query 43756 GGCGTCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGACTTAGCACATTGGATTG- 43814
|| || || ||||| || ||||| | ||| | | || || | | | ||||
Sbjct 742214 AGCATCTTTCTGGACTGCGGAAGAGATCGATCTCTCAAAGGATGTTCCTGACTGGAAGAA 742273
Query 43815 CA---TTAAAACCACAAGAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGA 43871
|| |||| ||| | |||| | |||| || | || ||||| || ||||| ||
Sbjct 742274 CAAGCTTAATGCCA-ATGAAAGATATTTCATCGCACGTGTGTTGGCCTTCTTTGCCGCCT 742332
Query 43872 GCGACGGGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTCAATTACCAG 43931
|| || || || |||| |||||| || || | || | ||||| | ||||
Sbjct 742333 CTGATGGTATCGTTGATGAGAATTTGATTCAAAACTTCACACAGAACGTTCAGCTGCCAG 742392
Query 43932 AAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACA 43991
| || | || || || || || || | || || || ||||| || | ||
Sbjct 742393 AGGCTAGGGCCTTCTACGGATTCCAGATCATGGTGGAGAACATCCATTCTGAGACCTATT 742452
Query 43992 GTCTTCTGATAGATACGTACATCAAAGATGGGCACGAGAAGCATCGATTGTTTAATGCGA 44051
||| || | || || ||| | | |||| | | || || || |||||||| |
Sbjct 742453 CTCTCTTGCTTGAAACCTACGTGACAGATAAGAAGGAATCTGATTACTTATTTAATGCCA 742512
Query 44052 TAGAAACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGATAAATTCAA 44111
| ||||| | || | ||||| | || ||| ||||| ||| ||||| || |
Sbjct 742513 TTGAAACTATTCCCCCAATTAAGGAAAAGGCATTATGGGCTCTTCGTTGGATCAACAGCA 742572
Query 44112 ATGATTCTTTT---GGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTT 44168
| ||| | | | |||| || | ||||| || || | | | ||||| | ||||| |
Sbjct 742573 AGGATGCACTATACGCAGAAAGATTGGTCGCCTTCGCCGCTATCGAAGGTGTCTTCTTCT 742632
Query 44169 CAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGT 44228
| || || ||||||||||| |||||| ||||||| ||||||||||||| || | || |
Sbjct 742633 CCGGTTCATTTGCGGCCATCTTTTGGCTAAAGAAGAGAGGTTTGATGCCAGGTCTTACCT 742692
Query 44229 TTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTGTTAC 44288
| || || || | || | | || ||||| |||||| |||||| || ||| | |||
Sbjct 742693 TCTCGAACGAACTTATCTGCAGAGACGAAGGTTTACATACCGATTTCGCCTGCCTATTAT 742752
Query 44289 TTGGATATCTAGGAGACGATAAGCCTTCATGTAAGACA---ATTACAGATATTGTTGTAG 44345
| || | || || | ||| | ||||| | || || | || | |
Sbjct 742753 TCTCTCATTT--GAAAC----ACCCTCCTAATAAGAAAATCATCACCAAGATCATGACTG 742806
Query 44346 AGGCAGTAAAGATAGAACAAGAATTTAT-GACAACAGCATTACCTGTAAATTTAATAGGA 44404
| || || | || ||| |||| ||| | || | ||||||||||| | | | ||
Sbjct 742807 AAGCTGTGGATATTGAA-AAGACTTTCTGGAGAGATGCATTACCTGTTTCTCTCTTGGGT 742865
Query 44405 ATGAATGAACTTTTGATGAACCAATATATTGAATACATTG----CAGATCGTTTACTTTT 44460
|||||| | ||||| | |||||| |||| | | || ||||| | ||||| |
Sbjct 742866 ATGAATTGTGATATGATGTATCAATATGTTGACTTCTGTGCCGACAGATTG-TTACTCT- 742923
Query 44461 GGAACTGGGTTGCGATAAACACTATATTG-TACAAAACCCGTTTGATTTTATGGAAAATA 44519
|| || ||||| ||| ||| | | ||| ||| || || ||||| |||||||| |
Sbjct 742924 --CCCTAGGCTGCGACAAAGTCTACAACGCTAC-AAATCCATTCGATTTCATGGAAAACA 742980
Query 44520 TTTCGTTGGAAGGCAAAACAAACTTTTTTGAAAA 44553
| || |||| || || || ||||| || |||||
Sbjct 742981 TCTCATTGGCTGGAAAGACGAACTTCTTCGAAAA 743014
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397455631856380
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |