Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20naardenensis_20[genbank_20GCA_5F001753995.1_202016-
10-07] 76 sequences; 11,283,072 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq12 295 8e-75
seq3 86.0 8e-12
seq23 82.4 1e-10
>seq12
Length=1129233
Score = 295 bits (326), Expect = 8e-75
Identities = 902/1368 (66%), Gaps = 35/1368 (3%)
Strand=Plus/Minus
Query 110681 AACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCA 110740
|||||||||||||| ||||||| |||||||||| | ||| | || |||||||| ||
Sbjct 53599 AACTCACCTGCGAGAACTCTTCTCTGGTAGATGTTCGAGGTGAAGGGCTCAAAGCACTCG 53540
Query 110741 TTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTA 110800
|||| |||| || || | || || ||||||||||||||||||| ||| || |||
Sbjct 53539 TTATAGCCCATAATCTGGGAAGTAGAAGCTGTTGGCATTGGTGCCACCAAGAGCGAGTTT 53480
Query 110801 CGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTAGTTGAGCTTGGTT 110860
| | ||| |||| || ||| | | |||||| || | || | |||
Sbjct 53479 CTCAAACCGTTCTTGGCAATCTTGGACTTCAAAGAATCCCAATCCCAA---AGATCGGTA 53423
Query 110861 T-CACCTTCCCACATG--TCAAACTG-AAGCACCCCTTGGGACGCGGGAGAACCCTCAAA 110916
| ||| || ||| || || || || | ||||||| | || |||||||||||| |
Sbjct 53422 GGCTTCTTACCCCATAAATCGAATTGTAATAAGCCCTTGG-ATGCAGGAGAACCCTCATA 53364
Query 110917 GGTTTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATA 110976
| | ||||| | ||| | |||| |||| ||| || ||||| || | ||||| ||
Sbjct 53363 GCTCTCATATGTACCCTCCTCTTCGGCCAGTTCCGAGGATGCCTCGAGAGCAGCGTGGTA 53304
Query 110977 CATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCAT--CTGAATCAAATGCGTAG 111034
|| || || ||||| || |||| || ||||| ||| ||||| | | ||
Sbjct 53303 AATAGTCTCGAAGATTTGAATGTTCAACTGACGTGCTTCTGGACTG--TCAAACG-GAAG 53247
Query 111035 CGGCA-CAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCG 111093
||| | | || || || | |||||| ||||| | | | | ||||||| ||
Sbjct 53246 GCGCATCTGGAAGAAGGTGTCGGCTAAACCTTGCACACCAACAGCGACTGGTCTGTTACG 53187
Query 111094 CATATTAGACTTTCGCGCAGTCTCA-ACGGGATAAAAATTTCTGTCAATGACTCGGTTTA 111152
||| ||||| | || || ||| || |||||| | |||||||||||||| ||||| |
Sbjct 53186 CATGTTAGAGTAACGTGCC-TCTGGGACAGGATAATAGTTTCTGTCAATGACACGGTTCA 53128
Query 111153 GATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAG-TC 111211
|| |||| || || | || | ||| | || || | | | |||| ||
Sbjct 53127 AGTTCCGAGTAAGAACTTTGGCAATCTTATGCAACTTCTCGAAGTTGTACCA-CGAGGTC 53069
Query 111212 TCTTC-----ATT-GACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTC 111265
| ||| ||| |||| | || ||| | || ||||| || || ||| | ||
Sbjct 53068 TTTTCGTCAGATTCGACAAAGGCCGGGAGGCAAAGAGAAGCCAAGTTACAGACACCAGTT 53009
Query 111266 TCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCC 111325
|| || ||| |||||| | ||| || |||||||| || ||| || || |||
Sbjct 53008 TCGTCTGGTGCTGAGTACTCGACAATCTCACAGCATAAGTTCGAGGACTTGATGGTACCC 52949
Query 111326 AAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCC 111385
|| |||| |||||||||||| |||| || |||||||||||||||||| | || || ||
Sbjct 52948 AAGTTCTGTTGGTTACTCTTTCTGTTACATGCATCCTTGTAGAGCATGAATGGAGTACCG 52889
Query 111386 GTCTCCGTCTGTGATTTGAGAATAGCCTTCCA-AACATCGGCGGCTGGTACAATGGCGT- 111443
|| || ||||| | || | ||| | ||| ||| || | | || | || | |||
Sbjct 52888 GTTTCAGTCTGGGCTTCCAAAATCTGGTACCACAACTTCTGAGCCTTG-ACGGT-ACGTC 52831
Query 111444 TGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGT 111503
| | ||||||||| |||||| ||||| | ||| |||||||| || || | |||
Sbjct 52830 TACCGCGTCCCTCCCTCTCGTAACGCGTGTATAAGGCCTCAAACTCGTCTCCGTACACGT 52771
Query 111504 CGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCC 111563
| || || || || || | | ||| | || |||| ||||||||| | |||||| |
Sbjct 52770 CAGAAAGGCCCGGAGCTTCGGATGGCGAAAATAGAGTCCATTGACCGTTCTGCTCAACAC 52711
Query 111564 GCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTC-TACACCGAGCCTCT 111622
|||||||||| | ||| |||||||| |||| || || | ||| | ||| || ||
Sbjct 52710 GCTTCATGAACAAGTCGGGAATCCATAGGGCTGGGAACAAATCACGGGCACGGA-TTTCC 52652
Query 111623 TCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCA 111682
|| | ||| || || || | |||| ||| || | ||| || ||||||||||| ||
Sbjct 52651 TCCTTACCATGATTCTTTCTGATATCAATGAAATCGAAGATGTCTGCGTGCCATGGTTCC 52592
Query 111683 AGATAGACTGCGATAGATCC----CTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGT 111738
| ||| ||||| || | || |||| | || |||| | || || | || ||
Sbjct 52591 ATATACACTGCAATGGCACCTGGTCTTTTG-TTACCTCCTTGGTCGACGTATCTGGCAGT 52533
Query 111739 GGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAAT 111798
| ||| || || |||| ||||||||||||||||| ||| ||| || || || ||
Sbjct 52532 GTTGTTGAAAACACGAATCATTGGAATAATACCATTTGAGGTACCGTTGGTACCGGCGAT 52473
Query 111799 ACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGA 111858
||| | |||| | || | || || ||||| |||||||| || || ||| ||
Sbjct 52472 GTAAGAGCCAGTGGCACGAACGTTGTGAATATGCATACCAATACCGCCGGCGGTCTTCGA 52413
Query 111859 GATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGC 111918
|| |||||||| | | ||| | ||||| || | || || || ||||| | ||
Sbjct 52412 AATCAAGGCACACTCTTTCAAAGTATCGTAGATGCCTTCAATAGAATCGTCCTTCATCGC 52353
Query 111919 GATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGT 111978
| | ||||| ||||||||||| ||| ||||| |||||||| | ||||| |
Sbjct 52352 AACCAAAAAGCAGGAAGACATCTGCGGATGTGGGGTACCCGCATTGAACAAAGTTGGAGA 52293
Query 111979 TGCGTGAATGAACATACCTTGGGACATCTTGTCGTATGTCTCCAAGAC 112026
||||| |||| || | |||||| || || ||||| | |||
Sbjct 52292 AGCGTGGGTGAAATAACGCTCGGACATTAGGTTATAGGTCTCGATGAC 52245
>seq3
Length=302914
Score = 86.0 bits (94), Expect = 8e-12
Identities = 197/294 (67%), Gaps = 2/294 (1%)
Strand=Plus/Minus
Query 11630 GCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGA 11689
|||||||| ||||| | ||| ||||| | || ||| || | |||| ||| || |
Sbjct 64020 GCATCAATTTCATCGACGAACACAATCGAAGGAGCATTCTCTCTGGCGGTTTTGAACAAG 63961
Query 11690 TCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGTTTGCGGCAGAGCAC 11749
|| |||||||| ||||| |||||||||||||| || || || | | | || |||
Sbjct 63960 TCACGAACCCTGGAAGCACCGACACCAACAAACATTTCAACGAACTCCGAACCGGA-CAC 63902
Query 11750 TGGAT-GAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTTCCCGT 11808
| || |||||| || | ||| || || | || || | | |||||| || ||
Sbjct 63901 AGAATAGAATGGAACTGCGGCTTCTCCAGCAGTAGCCTTAGCCAACAAGGTCTTACCGGT 63842
Query 11809 ACCTGGCTTACCCGCGAGAAGGGCGCCTCGGGGGATCTTGGCACCACTTCCAAAATATCT 11868
||| || ||| ||||| || |||| || ||||| ||||| | ||||||
Sbjct 63841 ACCAGGAGGACCGCAGAGAATTGCACCTCTTGGAATCTTTGCACCCAAACGCTCATATCT 63782
Query 11869 CTCGGGTTGCTTGAGAAAATCCACAATCTCTTCAAGTTCATCTTTGGCCGCGTC 11922
|| || |||||||| || | ||||| ||| || || ||||| ||| ||||
Sbjct 63781 TTCCGGATGCTTGAGGAAGTTCACAAACTCCATAATCTCTTCTTTAGCCTCGTC 63728
>seq23
Length=838141
Score = 82.4 bits (90), Expect = 1e-10
Identities = 85/109 (78%), Gaps = 2/109 (2%)
Strand=Plus/Minus
Query 122676 ACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACCCCGCTT 122735
||| || |||| | | |||||||| || |||||| ||||||||||| | ||| | |||
Sbjct 742724 ACCTTCGTCTCTGCAGATAAGTTCGTTCGAGAAGGTAAGACCTGGCATCAAACCTCTCTT 742665
Query 122736 CTTCAACCAATAAATAGC-GCAGAATGACCCGGAGAAGAAGATACCCTC 122783
||| | |||| | || || ||| ||||| ||||||||||||| ||| ||
Sbjct 742664 CTTTAGCCAAAAGATGGCCGCA-AATGAACCGGAGAAGAAGACACCTTC 742617
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628031403369600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |