Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20naardenensis_20[genbank_20GCA_5F001753995.1_202016-
10-07] 76 sequences; 11,283,072 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq12 217 2e-51
>seq12
Length=1129233
Score = 217 bits (240), Expect = 2e-51
Identities = 1151/1809 (64%), Gaps = 43/1809 (2%)
Strand=Plus/Minus
Query 117842 GTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGACAACTT 117901
||||||||| || ||||| ||||||| ||||||| | || | ||||| || | ||| ||
Sbjct 53912 GTAGTACATACCAGTCTTTAGCCCCTTCTTCCAGCCGTAGAAGTGCATCGAAGTCAATTT 53853
Query 117902 GGAGAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCC 117961
| ||| ||| | | | || |||||| || || ||||||| | || ||
Sbjct 53852 ACCCATGGTAGGAGCCTGTAAGTGGATGTTCATCGACTGCGACTGATCGAGGTAGGCACC 53793
Query 117962 CCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTCCTGTAGAG 118021
| || || |||||||| || | | |||| || ||||| ||||| | ||||||
Sbjct 53792 TCTGTCAGCTGCCATATCGATGATAGCCTTTTGTGGGAGCTCCCAGACAGTACGGTAGAG 53733
Query 118022 GTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCCACCCGCCTTGACCAT 118081
|| || || | |||||| | | | ||| ||||| || || | | | ||
Sbjct 53732 CTTTTTTATCTTATCTGGAACGTTTGGCAAATTCTGGATCGAACCGTTGTCGTGAATAAT 53673
Query 118082 GAGATCCTTCAT---ATCCTTTGACCAGAGACCAATCTTTTTGAGATC-CTCCACGAGAT 118137
| | |||||| ||| || ||||| ||| || | | || ||| || | |
Sbjct 53672 AAAGTTCTTCATGGCATCATT---CCAGATACCCATATCGACAAAGTCTCTCAACATG-T 53617
Query 118138 GCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGT 118197
|||||| | |||||||| ||||| | |||| | ||||| || | |||
Sbjct 53616 AAGGATTGACGATCTGGAACTCACCTGCGAGAACTCTTCTCTGGTAGATGTTCGAGGTGA 53557
Query 118198 ATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTG 118257
| |||||||||||||| || | |||| || |||| || || ||||| ||||| ||||
Sbjct 53556 AGGGCTCAAAGCACTCGTTATAGCCCATAATCTGGGAAGTAGAAGCTGTTGGCATTGGTG 53497
Query 118258 CCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCCCAGT 118317
||| | || ||| | | ||| || | ||| ||| | || ||||| |
Sbjct 53496 CCACCAAGAGCGAGTTTCTCAAACCGTTCTTGGCAATCTTGGACTTCAAAGAATCCCAAT 53437
Query 118318 CGTAGTTGAGCTTT-GTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGACGCT 118376
| | || | | | || | ||| | ||| || || | | || | ||| ||
Sbjct 53436 CCCAAA-GATCGGTAGGCTTCTTACCCCATAAATCGAATTGTAATAAGCCCTTGGATGCA 53378
Query 118377 GGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCG 118436
|| || |||||| | ||||||||| ||||| | || |||| ||| ||| ||||||
Sbjct 53377 GGAGAACCCTCATAGCTCTCATATGTACCCTCCTCTTCGGCCAGTTCCGAGGATGCCTCG 53318
Query 118437 AGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCAT-TGCCTTGGC-CTCGTCGG 118494
|| || ||||| || || || || || || || |||| || | || || | | |
Sbjct 53317 AGAGCAGCGTGGTAAATAGTCTCGAAGATTTGAATGTTCAACTGACGTGCTTCTGGACTG 53258
Query 118495 AATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAA 118554
||||||| || || | | || || || | |||||| ||||| | | |
Sbjct 53257 --TCAAACGGAAGGCGCATCTGGAAGAAGGTGTCGGCTAAACCTTGCACACCAACAGCGA 53200
Query 118555 TTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCC-ACGGGATAAAAATTCCTATCG 118613
||| | | | ||| ||||| | || || ||| || |||||| | || || ||
Sbjct 53199 CTGGTCTGTTACGCATGTTAGAGTAACGTGCC-TCTGGGACAGGATAATAGTTTCTGTCA 53141
Query 118614 ATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCA 118673
|| || | || | || || | ||| || | || | ||| | ||| ||| | |
Sbjct 53140 ATGACACGGTTCAAGTTCCGAGTAAGAACTTTGGCAATCTTATGCAACTTCTCGAAGTTG 53081
Query 118674 AAACTGCGAG-TCTCTTC-----ATT-GACATACTTAGGAAGGGCGATTGACGCCAGATT 118726
| | |||| ||| ||| ||| |||| | || ||| | || |||| ||
Sbjct 53080 TACCA-CGAGGTCTTTTCGTCAGATTCGACAAAGGCCGGGAGGCAAAGAGAAGCCAAGTT 53022
Query 118727 ACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACT 118786
||| ||| || || || | | |||||| | ||| || ||| ||||| ||
Sbjct 53021 ACAGACACCAGTTTCGTCTGGTGCTGAGTACTCGACAATCTCACAGCATAAGTTCGAGGA 52962
Query 118787 CTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCAT 118846
||| ||||| |||||||||| ||| || |||| ||||||| ||||||||||| |||||
Sbjct 52961 CTTGATGGTACCCAAGTTCTGTTGGTTACTCTTTCTGTTACATGCATCCTTGTAGAGCAT 52902
Query 118847 GTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCAGCTG 118905
| |||| || || || || || |||| | | ||| | ||| | | || | ||
Sbjct 52901 GAATGGAGTACCGGTTTCAGTCTGGGCTTCCAAAATCTGGTACCACAACTTCTGAGCCTT 52842
Query 118906 GCACAGTGGCGT-TGGCTCGCCCCTCTTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCT 118964
| || || ||| | | || ||||| |||||| ||||| | ||| ||||||||
Sbjct 52841 G-ACGGTA-CGTCTACCGCGTCCCTCCCTCTCGTAACGCGTGTATAAGGCCTCAAACTCG 52784
Query 118965 TCACC---CACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGA 119021
|| || |||| || || || || || || | ||| | || |||| |||||||
Sbjct 52783 TCTCCGTACACG---TCAGAAAGGCCCGGAGCTTCGGATGGCGAAAATAGAGTCCATTGA 52727
Query 119022 CCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCC 119081
|| || |||||| ||||||||||| | ||| || ||||| || || | ||| | |||
Sbjct 52726 CCGTTCTGCTCAACACGCTTCATGAACAAGTCGGGAATCCATAGGGCTGGGAACAAATCA 52667
Query 119082 CGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCC 119141
|| || ||| || | || ||||| | | || | || || | ||| ||
Sbjct 52666 CGGGCACGGATTTCCTCCTTACCATGATTCTTTCTGATATCAATGAAATCGAAGATGTCT 52607
Query 119142 GCGTGCCACGGTTCCAGGTACACCGCGATTGACCC----CTTACGACGACCAGCCTGGTT 119197
|||||||| ||||||| ||||| || || | || ||| | ||| | ||||
Sbjct 52606 GCGTGCCATGGTTCCATATACACTGCAATGGCACCTGGTCTTTTGTT-ACCTCCTTGGTC 52548
Query 119198 TACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCGGATTGGCC 119257
|| || || |||||| ||| || ||||||| ||||||||| ||||||| || ||
Sbjct 52547 GACGTATCTGGCAGTGTTGTTGAAAACACGAATCATTGGAATAATACCATTTGAGGTACC 52488
Query 119258 ATTTGTCCCC-CGAA-TACGAGACTTATTGGCTCTGACATCGTGGATGTGCATACCAATA 119315
|| || || ||| || ||| | | |||| | || | ||| || ||||||||||||
Sbjct 52487 GTTGGTACCGGCGATGTAAGAGCC--AGTGGCACGAACGTTGTGAATATGCATACCAATA 52430
Query 119316 CCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATC 119375
|| || || ||| || || || ||||| | | | | ||||||| || || ||
Sbjct 52429 CCGCCGGCGGTCTTCGAAATCAAGGCACACTCTTTCAAAGTATCGTAGATGCCTTCAATA 52370
Query 119376 GAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTGGGTGTACCAGCG 119435
|| || |||| | || | | |||||| ||||| || || || ||||| ||
Sbjct 52369 GAATCGTCCTTCATCGCAACCAAAAAGCAGGAAGACATCTGCGGATGTGGGGTACCCGCA 52310
Query 119436 TTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTGTCGTAGGTCTCC 119495
||||| | |||||| | |||||| |||| || | |||||| || ||||||||
Sbjct 52309 TTGAACAAAGTTGGAGAAGCGTGGGTGAAATAACGCTCGGACATTAGGTTATAGGTCTCG 52250
Query 119496 AAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGTATTGG 119555
| ||| || || || || || ||||| |||| | || | ||||| || | |||
Sbjct 52249 ATGACTCTTGGGATATCGTCACCATGAATTCCGACGGCAACTCTCATAATCAGATGTTGT 52190
Query 119556 GGTGTTTCCATCAGGATACCATCGAGCCTCTGGAGGTAACTCTTCTCCAAGGTCTTGAGA 119615
||| | || | |||||| || ||| || || ||||||||| |||| |
Sbjct 52189 GGTCTCTCTGCAACTTTACCATTGATTCTCAATAGATAGGAACGCTCCAAGGTTTTGAAA 52130
Query 119616 CCAAAATAG 119624
||||| |||
Sbjct 52129 CCAAAGTAG 52121
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618434612486560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |