Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20naardenensis_20[genbank_20GCA_5F001753995.1_202016-
10-07] 76 sequences; 11,283,072 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq12 208 9e-49
seq23 84.2 3e-11
>seq12
Length=1129233
Score = 208 bits (230), Expect = 9e-49
Identities = 1097/1729 (63%), Gaps = 47/1729 (3%)
Strand=Plus/Plus
Query 104237 ATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTCTTGGAGACATACGAC 104296
||| | || ||| |||| |||||||| || || || ||| | ||||| || ||
Sbjct 52203 ATGAGAGTTGCCGTCGGAATTCATGGTGACGATATCCCAAGAGTCATCGAGACCTATAAC 52262
Query 104297 AAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGGTACACCA 104356
|||||| | || |||| ||||| | ||||| | |||||||| ||||| |||
Sbjct 52263 CTAATGTCCGAGCGTTATTTCACCCACGCTTCTCCAACTTTGTTCAATGCGGGTACCCCA 52322
Query 104357 AGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAACGGTATC 104416
|| || ||||| ||||| | | || | ||||| || || || | || |||
Sbjct 52323 CATCCGCAGATGTCTTCCTGCTTTTTGGTTGCGATGAAGGACGATTCTATTGAAGGCATC 52382
Query 104417 TATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGGATGCAC 104476
|| | ||| | | |||||||| || || ||| || || |||||||| |||||
Sbjct 52383 TACGATACTTTGAAAGAGTGTGCCTTGATTTCGAAGACCGCCGGCGGTATTGGTATGCAT 52442
Query 104477 ATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAATGGTCAATCAGATGGT 104536
|| || | || | |||| | ||| || || || || ||| ||| |||||
Sbjct 52443 ATTCACAACGTTCGTGCCACTGGCTCTTACATCGCCGGTACCAACGGTACCTCAAATGGT 52502
Query 104537 ATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAGCTGGGCGT 104596
|||||||||||| |||| || || ||| ||| || | || || | |||| ||
Sbjct 52503 ATTATTCCAATGATTCGTGTTTTCAACAACACTGCCAGATACGTCGACCAAG-GAGGTAA 52561
Query 104597 CGAAAG----GGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTT 104652
| |||| || | || ||||| ||| | || ||||||||||| || ||| | || ||
Sbjct 52562 CAAAAGACCAGGTGCCATTGCAGTGTATATGGAACCATGGCACGCAGACATCTTCGATTT 52621
Query 104653 CCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGC 104712
| |||| | | || || ||| | ||||| || ||| ||| | ||| | ||
Sbjct 52622 CATTGATATCAGAAAGAATCATGGTAAGGAGGAAATCCGTGCCCGTGATTTGTTCCCAGC 52681
Query 104713 TCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTT 104772
|| |||||||| || | ||||||||| | |||||| ||| || | ||| |||| ||
Sbjct 52682 CCTATGGATTCCCGACTTGTTCATGAAGCGTGTTGAGCAGAACGGTCAATGGACTCTATT 52741
Query 104773 TTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTG---GGTGAGGAGTTTGAAGCCCT 104829
|| ||| | | || || || || || || |||| || || |||||||| ||| |
Sbjct 52742 TTCGCCATCCGAAGCTCCGGGCCTTTC---TGACGTGTACGGAGACGAGTTTGAGGCCTT 52798
Query 104830 TTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGTGCCAGCTGCCGATG-TGT 104888
||||| |||||| || || || | | || || | || | || | |||
Sbjct 52799 ATACACGCGTTACGAGAGGGAGGGACGCGGTAGACGTACCGT-CAAGGCTCAGAAGTTGT 52857
Query 104889 GGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGCTTTACAAAGACG 104948
|| | ||| | | | || || || || ||||| |||| |||||| ||||| || |
Sbjct 52858 GGTACCAGATTTTGGAAGCCCAGACTGAAACCGGTACTCCATTCATGCTCTACAAGGATG 52917
Query 104949 CCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGTA 105008
| |||||| ||||||||| ||| |||| |||||| |||||| || || | ||
Sbjct 52918 CATGTAACAGAAAGAGTAACCAACAGAACTTGGGTACCATCAAGTCCTCGAACTTATGCT 52977
Query 105009 CAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCG 105068
|| || | || | ||| ||| || || | ||| |||||| | || || |
Sbjct 52978 GTGAGATTGTCGAGTACTCAGCACCAGACGAAACTGGTGTCTGTAACTTGGCTTCTCTTT 53037
Query 105069 CTCTCCCCAAGTATGTGGATCCAGAGACAAAGACAT-TTG-----ATTATGAAAAACTCC 105122
||||| | ||| || | || |||||| | || | | || || | |
Sbjct 53038 GCCTCCCGGCCTTTGTCGAATCTGACGAAAAGACCTCGTGGTACAACTTCGAGAAGTTGC 53097
Query 105123 ACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACC 105182
| | || | ||| | | || ||| | ||| | || ||||| ||||| | ||| |
Sbjct 53098 ATAAGATTGCCAAAGTTCTTACTCGGAACTTGAACCGTGTCATTGACAGAAACTATTATC 53157
Query 105183 CCGT-TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTTCAG 105241
| || ||| || ||| | ||||| ||| | || | ||| | | | | ||||| ||
Sbjct 53158 CTGTCCCAGA-GGCACGTTACTCTAACATGCGTAACAGACCAGTCGCTGTTGGTGTGCAA 53216
Query 105242 GGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTG--ATTCCGACGAAGCGAAGG 105299
||| | || || ||| | | |||| | |||| | ||| |||||
Sbjct 53217 GGTTTAGCCGACACCTTCTTCCAGATGCGCCTTCCGTTTGACAGTCC--AGAAGCACGTC 53274
Query 105300 AAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAGGCGAGTTCAGAGT 105359
| | || | || || ||||| || || ||||| ||||| ||||| || ||
Sbjct 53275 AGTTGAACATTCAAATCTTCGAGACTATTTACCACGCTGCTCTCGAGGCATCCTCGGAAC 53334
Query 105360 TGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGC 105419
|||| || | || ||| ||||||| | || |||||||||||| || || |||||| |
Sbjct 53335 TGGCCGAAGAGGAGGGTACATATGAGAGCTATGAGGGTTCTCCTGCATC-CAAGGGCTTA 53393
Query 105420 TT-CAATTTGATATGTGGGAAGGTGAGA--CCAAGC-TTCACTACGACTGGGAAGCTCTC 105475
|| ||||| ||| | ||| ||| ||| || | | || | || ||||| || |
Sbjct 53394 TTACAATTCGATTTATGG---GGTAAGAAGCCTACCGATCTTTGGGATTGGGATTCTTTG 53450
Query 105476 AAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTCCAATGCCAACA 105535
||| || |||| ||| | | ||| ||| | |||| ||||||||||||
Sbjct 53451 AAGTCCAAGATTGCCAAGAACGGTTTGAGAAACTCGCTCTTGGTGGCACCAATGCCAACA 53510
Query 105536 GCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATC 105595
|| || || | || || |||| |||| || |||||||| |||| ||| ||||||||
Sbjct 53511 GCTTCTACTTCCCAGATTATGGGCTATAACGAGTGCTTTGAGCCCTTCACCTCGAACATC 53570
Query 105596 TATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAA--CAAGCATCTCGTGGATG 105653
|| | ||||||| ||||| || ||||| ||| ||||| | ||| | || |
Sbjct 53571 TACCAGAGAAGAGTTCTCGCAGGTGAGTTCCAGATCGTCAATCCTTACATGT--TGAGAG 53628
Query 105654 ACCTCAAAGAGATTGGTCTCTGGTCCAAGGAT---ATGAAGGATCTCATGGTGAAAGCGG 105710
|| | || || ||| ||||| || ||| |||||| | | || | | |
Sbjct 53629 ACTTTGTCGATATGGGTATCTGG---AATGATGCCATGAAGAACTTTATTATTCACGACA 53685
Query 105711 GTGGTTCCATTCAAAATATTGTGGATATTCCAAATGAAATTAAGAAGTTGTACCGCACAG 105770
||||| || || ||| | | ||||| || | || || ||| | ||||| || |
Sbjct 53686 ACGGTTCGATCCAGAATTTGCCAAACGTTCCAGATAAGATAAAAAAGCTCTACCGTACTG 53745
Query 105771 TTTGGGAAATCAAGATGAAGGATGTCATTGACATGGCCGCAGATCGTGGTCGCTTCATTG 105830
| ||||| || |||| | |||| || ||||| || || | ||| || | | |
Sbjct 53746 TCTGGGAGCTCCCACAAAAGGCTATCATCGATATGGCAGCTGACAGAGGTGCCTACCTCG 53805
Query 105831 ATCAAAGTCAAAGT--ATGAATCTCTTCATGGAAAGTCCAACGATGTCCAAGCTCTCTTC 105888
||| |||| ||| ||||| || | | | ||| || ||| || | ||||
Sbjct 53806 ATC--AGTCGCAGTCGATGAACATCCACTTACAGGCTCCTACCATGGGTAAATTGACTTC 53863
Query 105889 TATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTATTAC 105937
|||||| | ||| | ||||||||||| || || || || ||||| |||
Sbjct 53864 GATGCACTTCTACGGCTGGAAGAAGGGGCTAAAGACTGGTATGTACTAC 53912
Score = 82.4 bits (90), Expect = 9e-11
Identities = 157/231 (68%), Gaps = 3/231 (1%)
Strand=Plus/Minus
Query 104512 GGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGC 104571
||| || ||||| ||||| ||| ||| | || ||||| || || || ||| || ||
Sbjct 997990 GGGTACCAATGGAGAATCAAGTGGAATTGTGCCTATGCTGCGAGTCTTCAACAGTACCGC 997931
Query 104572 GCGCTATGTAAATCAAGCTGGGCGT---CGAAAGGGATCTATCGCAGTCTATCTTGAGCC 104628
| ||||| | || | ||| | ||| || ||||| | |||||| || ||
Sbjct 997930 TCAATATGTTGACCAGGGTGGTAATAAACGACCTGGTGCTATCTGTGCCTATCTAGAACC 997871
Query 104629 ATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGC 104688
||||| |||||||||||||| ||| | || ||| ||||| ||| | || |||
Sbjct 997870 GTGGCATGCGGATATCATGGAATTCTTAGACTTGAAAAAGAACCACGGTAAGGAAGAGAT 997811
Query 104689 GCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAA 104739
| || | | || || |||| ||||| ||||| |||||| | ||||||||
Sbjct 997810 GAGGGCCAGGGACCTATTCTATGCTCTTTGGATCCCAGATTTGTTCATGAA 997760
>seq23
Length=838141
Score = 84.2 bits (92), Expect = 3e-11
Identities = 85/108 (79%), Gaps = 2/108 (2%)
Strand=Plus/Plus
Query 94831 GAGGGTATCTTCTTCTCTGGTTCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCT 94889
|| ||| |||||||||| ||||| || |||| | || | |||||| |||||| ||||| |
Sbjct 742617 GAAGGTGTCTTCTTCTCCGGTTCATT-TGCGGCCATCTTTTGGCTAAAGAAGAGAGGTTT 742675
Query 94890 CATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGG 94937
||||||||||| |||||| ||||| ||||||| | ||||| ||
Sbjct 742676 GATGCCAGGTCTTACCTTCTCGAACGAACTTATCTGCAGAGACGAAGG 742723
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583260245902240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |