Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20naardenensis_20[genbank_20GCA_5F001753995.1_202016-
10-07] 76 sequences; 11,283,072 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq12 152 6e-32
>seq12
Length=1129233
Score = 152 bits (168), Expect = 6e-32
Identities = 353/527 (67%), Gaps = 4/527 (1%)
Strand=Plus/Plus
Query 53174 GAGACGCCTCAGTATCTTTTCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACG 53233
|||| || || |||| | ||| | || ||| | || || || |||||||| | |
Sbjct 52182 GAGAGACCACAACATCTGATTATGAGAGTTGCCGTCGGAATTCATGGTGACGATATCCCA 52241
Query 53234 CGTGTCCGTGAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACC 53293
| ||| ||||| || || ||||| | | || || || ||||| | |||||
Sbjct 52242 AGAGTCATCGAGACCTATAACCTAATGTCCGAGCGTTATTTCACCCACGCTTCTCCAACT 52301
Query 53294 CTGTTCAACGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAG 53353
||||||| || ||||| || || |||||||| |||||| |||| |||||||||
Sbjct 52302 TTGTTCAATGCGGGTACCCCACATCCGCAGATGTCTTCCTGCTTTTTGGTTGCGATGAAG 52361
Query 53354 GATGACTCGATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGG 53413
|| || || || || ||||||||||| || | || ||||||||| || || |||
Sbjct 52362 GACGATTCTATTGAAGGCATCTACGATACTTTGAAAGAGTGTGCCTTGATTTCGAAGACC 52421
Query 53414 TCGGGTGGTATCGGTATCCACTGCTC-GAACGTCCGTGCGAACGGCACACCAATCAAGGG 53472
| || ||||| ||||| || | || ||||| ||||| | ||| | ||| ||
Sbjct 52422 GCCGGCGGTATTGGTATGCA-TATTCACAACGTTCGTGCCACTGGCTCTTACATCGCCGG 52480
Query 53473 GACGAACGGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCG 53532
|| ||||| | | |||| || | || ||| | || || ||||||||||| ||| |
Sbjct 52481 TACCAACGGTACCTCAAATGGTATTATTCCAATGATTCGTGTTTTCAACAACACTGCCAG 52540
Query 53533 GTACGTCAACCAGGGTGGTGGGAAGCG-CAAGGGGTCGTTCGCCATCTACCTCGAGCCGT 53591
|||||| |||| || ||| || | | ||| | | || || | || | || || |
Sbjct 52541 ATACGTCGACCAAGGAGGTAACAAAAGACCAGGTGCCATT-GCAGTGTATATGGAACCAT 52599
Query 53592 GGCACGCCGACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGC 53651
||||||| ||||| | || || | || | | |||||| ||| | || || || |
Sbjct 52600 GGCACGCAGACATCTTCGATTTCATTGATATCAGAAAGAATCATGGTAAGGAGGAAATCC 52659
Query 53652 GCTGCCGTGACCTGTTTACAGCTCTGTGGATTCCGGACCTCTTCATG 53698
| |||||| |||| |||| || |||||||| ||| | ||||||
Sbjct 52660 GTGCCCGTGATTTGTTCCCAGCCCTATGGATTCCCGACTTGTTCATG 52706
Score = 125 bits (138), Expect = 8e-24
Identities = 140/187 (75%), Gaps = 0/187 (0%)
Strand=Plus/Plus
Query 55739 TACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGACATGAGTGCTGATCGTGGT 55798
||||| || || |||||| | ||||| ||| | | || || ||| ||||| | |||
Sbjct 53736 TACCGTACTGTCTGGGAGCTCCCACAAAAGGCTATCATCGATATGGCAGCTGACAGAGGT 53795
Query 55799 GCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCTTCACTGGCCAAG 55858
|| ||| |||| ||||| ||||| |||||||| | | || |||| | ||| ||
Sbjct 53796 GCCTACCTCGATCAGTCGCAGTCGATGAACATCCACTTACAGGCTCCTACCATGGGTAAA 53855
Query 55859 TTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGTATGTACTATCTG 55918
|||| ||||||||||| ||||| ||||||||||| || ||||| ||||||||||| ||
Sbjct 53856 TTGACTTCGATGCACTTCTACGGCTGGAAGAAGGGGCTAAAGACTGGTATGTACTACTTG 53915
Query 55919 CGGACCC 55925
|| ||||
Sbjct 53916 CGTACCC 53922
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547215480144800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |