Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20naardenensis_20[genbank_20GCA_5F001753995.1_202016-
10-07] 76 sequences; 11,283,072 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq12 168 8e-37
seq1 136 5e-27
seq45 118 1e-21
>seq12
Length=1129233
Score = 168 bits (186), Expect = 8e-37
Identities = 1098/1752 (63%), Gaps = 67/1752 (4%)
Strand=Plus/Minus
Query 80032 GCCCGCGTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGC 80091
||| | || |||| |||||||| || ||||| || ||||||||||||||||| | ||||
Sbjct 53926 GCCTGGGTACGCAAGTAGTACATACCAGTCTTTAGCCCCTTCTTCCAGCCGTAGAAGTGC 53867
Query 80092 ATAGAACTGAGCTTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGA 80151
|| ||| | | || | | || || || | | |||||||| ||||| ||||||
Sbjct 53866 ATCGAAGTCAATTTACCCATGGTAGGAGCCTGTAAGTGGATGTTCATCGACTGCGACTGA 53807
Query 80152 CAGATGAAAGCCCCACGATCTGCCGCCATTTCAATAATTGACTTTTGTGGAATTTCCCAT 80211
|| | | || || | || || ||||| || || || | ||||||||| | |||||
Sbjct 53806 TCGAGGTAGGCACCTCTGTCAGCTGCCATATCGATGATAGCCTTTTGTGGGAGCTCCCAG 53747
Query 80212 ACTGTACGATACACCTTACGAAGCTCCTCTGGAATGTC---CAGATTTTGCACACTGCCA 80268
|| ||||| || | ||| | || ||||||| || || ||| || | ||
Sbjct 53746 ACAGTACGGTAGAGCTTTTTTATCTTATCTGGAACGTTTGGCAAATTCTGGATCGAACCG 53687
Query 80269 CCGTCCTTTACAATTTGATTTTTCAATTCAGACGTCCAGACACCAAGCTTGTGCAGATCT 80328
||| | | ||| || |||| || |||||| ||| | | | | |||
Sbjct 53686 TTGTCGTGAATAATAAAGTTCTTCATGGCATCATTCCAGATACCCATATCGACAAAGTCT 53627
Query 80329 TTCACAAGGT---GCTTGTTAATCATGACAAACTCTCCCGCGAGGGTGCGACGCAGATAC 80385
||| | || | ||| ||| || |||| || ||||| | | | | ||
Sbjct 53626 CTCAACATGTAAGGATTGACGATCTGGA---ACTCACCTGCGAGAACTCTTCTCTGGTAG 53570
Query 80386 AGGTTTGTAGTGTAAGGCTCAAATGCCTCGTTGTTTCCGAGGATCTGAGCCGTGCTCGCC 80445
| ||| | ||| | |||||||| |||||| | || | ||||| | || ||
Sbjct 53569 ATGTTCGAGGTGAAGGGCTCAAAGCACTCGTTATAGCCCATAATCTGGGAAGTAGAAGCT 53510
Query 80446 GTCGGCATCGGGCCGACCAACAGTGAATTCCGCAGGCCGTGCTTCTTGATATCCTCGCGC 80505
|| ||||| || | ||||| || || || | || |||| ||||| ||
Sbjct 53509 GTTGGCATTGGTGCCACCAAGAGCGAGTTTCTCAAACCGT---TCTTG----------GC 53463
Query 80506 AAATCT--GAC--CAAA-AATC--AACCCCAACGCTGTG----------ACCCCACATGT 80548
|| ||| ||| |||| |||| || ||||| | | | |||||| | |
Sbjct 53462 AA-TCTTGGACTTCAAAGAATCCCAATCCCAAAGATCGGTAGGCTTCTTACCCCATAAAT 53404
Query 80549 CGTGCTGCAAGATGCCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTACGGGCCCTCCG 80608
|| || || | ||||| || || ||||| ||| | | |||| || | ||||||
Sbjct 53403 CGAATTGTAATAAGCCCTTGGATGCAGGAGAACCCTCATAGCTCTCATATGTACCCTCC- 53345
Query 80609 TCTT-GGCCAGCTCACACGACTCCATAAGGGCCGCGTGATAAATGCACTCAAAGACGCCC 80667
|||| |||||| || | || || || || ||||| ||||| ||| ||||
Sbjct 53344 TCTTCGGCCAGTTCCGAGGATGCCTCGAGAGCAGCGTGGTAAATAGTCTCGAAGATTTGA 53285
Query 80668 TTGTTCACACCG-CGCGCCTGTGGGTCGTCGAACGACAAGCCCATCATCATGAACACGTC 80726
|||||| || | || || | ||| ||| |||| | || |||| | ||| |||
Sbjct 53284 ATGTTCA-ACTGACGTGCTTCTGGACTGTCAAACGGAAGGCGCATCTGGAAGAAGGTGTC 53226
Query 80727 AGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGATCGCTCGGCCTC 80786
|| | || || || || | |||| || | || ||| |||| || |||||
Sbjct 53225 GGCTAAACCTTGCACACCAACAGCGACTGGTCTGTTACGCATGTTAGAGTAACGTGCCTC 53166
Query 80787 CGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAACAACCCGTGT 80846
|| | || ||| |||| | || ||||| ||||||| ||| || |||| ||| |
Sbjct 53165 TGGGACAGGATAATAGTTTCTGTCAATGACACGGTTCAAGTTCCGAGTAAGAACTTTGGC 53106
Query 80847 AACATCATGAAGTTTCTGAAAGTCGAATT----GGT-------TCCCCTTC-ACAAATGC 80894
|| | ||| | |||| |||| | | ||| || ||| ||||| ||
Sbjct 53105 AATCTTATGCAACTTCTCGAAGTTGTACCACGAGGTCTTTTCGTCAGATTCGACAAAGGC 53046
Query 80895 CGGAAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTCGAC 80954
||| |||| || || |||| || || || | || || | ||| |||||||
Sbjct 53045 CGGGAGGCAAAGAGAAGCCAAGTTACAGACACCAGTTTCGTCTGGTGCTGAGTACTCGAC 52986
Query 80955 GATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTTGGC 81014
|| || ||| || || || ||||| || ||||||| ||| | ||||| |||
Sbjct 52985 AATCTCACAGCATAAGTTCGAGGACTTGATGGTACCCAAGTTCTGTTGGTTACTCTTTCT 52926
Query 81015 GTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGGAT 81074
||| || || ||||||||| |||| | || |||||||| || ||| | | | ||
Sbjct 52925 GTTACATGCATCCTTGTAGAGCATGAATGGAGTACCGGTTTCAGTCTGGGCTTCCAAAAT 52866
Query 81075 GGCGTCCCAAATCTCGCGCGCCTTGACC--ACCT-TGCGGAATTTGCCTTCGGCCACATA 81131
|| ||| | || | |||||||| || | | | | | || || | | ||
Sbjct 52865 CTGGTACCACAACTTCTGAGCCTTGACGGTACGTCTACCGCGT---CCCTCCCTCTCGTA 52809
Query 81132 CTTGGCGTAAGCTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACTCGTT 81191
| ||| | || |||| | | |||| | |||| ||| | || |||
Sbjct 52808 ACGCGTGTATAAGGCCTCAAACTCGTCTCCGTACACGTCAGAAAGGCCCGGAGCTTCGGA 52749
Query 81192 AGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGGAT 81251
|| | | || ||| | || | ||| ||| ||||||||| ||| || ||
Sbjct 52748 TGGCGAAAATAGAGTCCATTGACCGTTCTGCTCAACACGCTTCATGAACAAGTCGGGAAT 52689
Query 81252 CCAGAGGGCGGTGAACAGGTCGCGGCAGCGCGCCTCCTCATCACCCTGGTTGAGGCGCAA 81311
||| ||||| | ||||| || ||| || ||||| | ||| || || | |
Sbjct 52688 CCATAGGGCTGGGAACAAATCACGGGCACGGATTTCCTCCTTACCATGATTCTTTCTGAT 52629
Query 81312 CTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGACCC--- 81368
|| | || || | |||||| || |||||||| |||| |||||| || || | ||
Sbjct 52628 ATCAATGAAATCGAAGATGTCTGCGTGCCATGGTTCCATATACACTGCAATGGCACCTGG 52569
Query 81369 -CTTGCGACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAG 81427
||| | || || |||| |||||| | |||||| ||| || ||||| | ||| |
Sbjct 52568 TCTTTTGTTA-CCTCCTTGGTCGACGTATCTGGCAGTGTTGTTGAAAACACGAATCATTG 52510
Query 81428 GGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCACCT 81487
| || ||||||| ||| |||||| ||||| |||| || || |||| || || |
Sbjct 52509 GAATAATACCATTTGAGGTACCGTTGGTACCGGCGATGTAAGAGCCAGTGGCACGAACGT 52450
Query 81488 TGCTGATTGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATGG 81547
|| || | ||| || || || | ||| |||||| |||||| |||| |
Sbjct 52449 TGTGAATATGCATACCAATACCGCCGGCGGTCTTCGAAATCAAGGCACACTCTTTCAAAG 52390
Query 81548 TCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCT 81607
| || || || || || || ||| | ||||| ||| ||| || ||| |||||||
Sbjct 52389 TATCGTAGATGCCTTCAATAGAATCGTCCTTCATCGCAACCAAAAAGCAGGAAGACATCT 52330
Query 81608 GAGGGCTTTTTGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTTG 81667
| || | | || |||||||||| ||||| | ||||| |||||||||| | |
Sbjct 52329 GCGGATGTGGGGTACCCGCATTGAACAAAGTTGGAGAAGCGTGGGTGAAATAACGCTCGG 52270
Query 81668 ACATCAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACCGATAGCTA 81727
|||| |||| |||||| || |||| | ||| ||||||||||| ||||| |||| || |
Sbjct 52269 ACATTAGGTTATAGGTCTCGATGACTCTTGGGATATCGTCACCATGAATTCCGACGGCAA 52210
Query 81728 CACGCATAAACA 81739
| | ||||| ||
Sbjct 52209 CTCTCATAATCA 52198
>seq1
Length=1746572
Score = 136 bits (150), Expect = 5e-27
Identities = 158/213 (74%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| || || ||||| | ||||| ||||| ||||| | ||||||||||| |
Sbjct 814058 ATGCAAATTTTCGTTAAGACCTTGACCGGTAAGACCATTACCTTGGAGGTTGAGTCTTCT 813999
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | |||| ||| | ||| || || || ||||||||||||||||| || || |||
Sbjct 813998 GACACTATTGACAATGTCAAGCAGAAGATCCAAGACAAGGAGGGAATTCCACCTGATCAG 813939
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | | || |||||||||||||| | ||||||| | || | ||||||| ||
Sbjct 813938 CAGAGATTGATCTTTGCTGGTAAGCAGTTGGAGGATGGCAGAACATTGTCAGACTACAAC 813879
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
|||| ||||||||||| | || ||||||||
Sbjct 813878 ATCCAGAAGGAATCCACCTTGCACTTAGTCTTG 813846
>seq45
Length=579175
Score = 118 bits (130), Expect = 1e-21
Identities = 145/198 (73%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
||||||||| || || ||||| | || || ||||| ||||| | || || |||||
Sbjct 355110 AATGCAAATTTTCGTTAAGACCTTGACGGGTAAGACCATTACCTTGGAAGTCGAGTCTTC 355051
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
||||| ||||| ||| | ||| || ||||| || ||||||||||| || ||||| ||
Sbjct 355050 TGATACCATTGACAATGTCAAGCAGAAGATTCAAGATAAGGAGGGAATCCCACCAGATCA 354991
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584
|||| | | || ||||||||||||||| | ||||| | | || | | ||||| ||
Sbjct 354990 GCAGAGATTGATCTTTGCTGGTAAGCAATTGGAGGACGGCAGAACTTTGTCCGACTACAA 354931
Query 27585 TGTCCAAAAGGAATCCAC 27602
| ||||||||||| ||
Sbjct 354930 CATTCAAAAGGAATCAAC 354913
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570309858205120
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