Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20naardenensis_20[genbank_20GCA_5F001753995.1_202016- 10-07] 76 sequences; 11,283,072 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq16 87.8 1e-12 >seq16 Length=109755 Score = 87.8 bits (96), Expect = 1e-12 Identities = 191/281 (68%), Gaps = 20/281 (7%) Strand=Plus/Minus Query 29838 TGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCAC---GTTATCCA 29894 |||| || ||||| || ||| | | ||| || || || | |||||| |||| || Sbjct 15205 TGGGGAACGGTCTTGGGATCCTGGCAATCTGTGTTTTAAGGGCTTCCACATGGTTA--CA 15148 Query 29895 GGTAGACGTGAGCGTCTCCCAGGTTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGAC-G 29953 | || ||||||| ||||||| | ||||| || || || ||||| | | || | Sbjct 15147 G-TACACGTGAGAATCTCCCATGACATGGACGAATTCACCAGGTTCCATATTGCACACTG 15089 Query 29954 TGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCC 30013 || || |||||||| ||||| |||| ||| ||| ||||||||||| || || || ||| Sbjct 15088 TG-GCTATCATGTAGGTGAGTAGAGCGTAAGAGGCAATGTTAAAGGGAACACCAAGACCC 15030 Query 30014 ATGTCCCCCGACCTCTGGTAGAGCTGACA-------CGAGAGCTCTCCG-----TCGCTC 30061 || || | ||| |||||||| | ||| || | | | |||| ||| Sbjct 15029 ATATCGCACGATCTCTGGTACATCTGGCAATTCAACCTCGGCTTGTCCGATTTAAAGCTG 14970 Query 30062 ACGTAAAACTGACACATGGCGTGGCACGGAGGAAGAGCCAT 30102 ||||| ||||| || | | |||| |||||||| || ||||| Sbjct 14969 ACGTAGAACTGGCAGAAGACGTGACACGGAGGTAGTGCCAT 14929 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406310023654992