Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20naardenensis_20[genbank_20GCA_5F001753995.1_202016-
10-07] 76 sequences; 11,283,072 total letters
Query= NC_028461.1
Length=127011
Score E
Sequences producing significant alignments: (Bits) Value
seq16 87.8 1e-12
>seq16
Length=109755
Score = 87.8 bits (96), Expect = 1e-12
Identities = 191/281 (68%), Gaps = 20/281 (7%)
Strand=Plus/Minus
Query 29838 TGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCAC---GTTATCCA 29894
|||| || ||||| || ||| | | ||| || || || | |||||| |||| ||
Sbjct 15205 TGGGGAACGGTCTTGGGATCCTGGCAATCTGTGTTTTAAGGGCTTCCACATGGTTA--CA 15148
Query 29895 GGTAGACGTGAGCGTCTCCCAGGTTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGAC-G 29953
| || ||||||| ||||||| | ||||| || || || ||||| | | || |
Sbjct 15147 G-TACACGTGAGAATCTCCCATGACATGGACGAATTCACCAGGTTCCATATTGCACACTG 15089
Query 29954 TGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCC 30013
|| || |||||||| ||||| |||| ||| ||| ||||||||||| || || || |||
Sbjct 15088 TG-GCTATCATGTAGGTGAGTAGAGCGTAAGAGGCAATGTTAAAGGGAACACCAAGACCC 15030
Query 30014 ATGTCCCCCGACCTCTGGTAGAGCTGACA-------CGAGAGCTCTCCG-----TCGCTC 30061
|| || | ||| |||||||| | ||| || | | | |||| |||
Sbjct 15029 ATATCGCACGATCTCTGGTACATCTGGCAATTCAACCTCGGCTTGTCCGATTTAAAGCTG 14970
Query 30062 ACGTAAAACTGACACATGGCGTGGCACGGAGGAAGAGCCAT 30102
||||| ||||| || | | |||| |||||||| || |||||
Sbjct 14969 ACGTAGAACTGGCAGAAGACGTGACACGGAGGTAGTGCCAT 14929
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406310023654992
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |