Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20naardenensis_20[genbank_20GCA_5F001753995.1_202016-
10-07] 76 sequences; 11,283,072 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq45 113 3e-20
seq15 93.3 3e-14
seq1 91.5 1e-13
>seq45
Length=579175
Score = 113 bits (124), Expect = 3e-20
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
|||||||| ||||||||||| ||| | ||||| || || || || | ||||| || ||
Sbjct 355112 AAAATGCAAATTTTCGTTAAGACCTTGACGGGTAAGACCATTACCTTGGAAGTCGAGTCT 355053
Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727
| || || |||| | | || || || ||| || || || || | || ||||||
Sbjct 355052 TCTGATACCATTGACAATGTCAAGCAGAAGATTCAAGATAAGGAGGGAATCCCACCAGAT 354993
Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787
|| ||| | || || ||||| || || ||| |||| |||| | ||||| ||| |||
Sbjct 354992 CAGCAGAGATTGATCTTTGCTGGTAAGCAATTGGAGGACGGCAGAACTTTGTCCGACTAC 354933
Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837
||||| ||||| || || ||||| || || ||| | || ||| |||| ||
Sbjct 354932 AACATTCAAAAGGAATCAACATTGCACTTGGTTCTCAGATTGAGAGGTGG 354883
>seq15
Length=115448
Score = 93.3 bits (102), Expect = 3e-14
Identities = 159/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||||||||| || || | || || ||||| ||||| | ||||| || || |
Sbjct 245 ATGCAGATTTTCGTCAAGACATTAACAGGCAAAACCATCACCTTGGAAGTCGAATCTTCA 304
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
||||| | || | | |||||||| || || ||||||||| | || || |||||
Sbjct 305 GACACGATCGATAACGTGAAACAAAAGATCCAAGATAAAGAAGGTATTCCTCCTGATCAG 364
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACG--AACGCACTTTAGGCGATTACA 23788
||| | || || |||||||| || || | ||||| | | |||||| || ||||
Sbjct 365 CAGAGATTGATCTTTGCCGGTAAGCAGTTAGAAGATGGTAGAACACTTT--CTGACTACA 422
Query 23789 ACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837
| || || || ||||| || | || || || || |||||| | || ||
Sbjct 423 ATATCCAGAAGGAGTCTACTCTTCACTTGGTCTTGAGGTTGAGGGGTGG 471
Score = 87.8 bits (96), Expect = 1e-12
Identities = 158/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||||||||| || || | || || || || ||||| | ||||| || || |
Sbjct 17 ATGCAGATTTTCGTCAAGACATTGACTGGTAAGACCATCACCTTGGAAGTCGAGTCTTCT 76
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
|| || | || | | |||||||| || || ||||||||| | || || |||||
Sbjct 77 GATACGATCGATAATGTGAAACAAAAGATCCAAGATAAAGAAGGTATTCCTCCTGATCAG 136
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACG--AACGCACTTTAGGCGATTACA 23788
||| | || || |||||||| || || | ||||| | | |||||| || ||||
Sbjct 137 CAGAGATTGATCTTTGCCGGTAAGCAGTTAGAAGATGGTAGAACACTTT--CTGACTACA 194
Query 23789 ACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837
| || || || ||||| || | || || ||||| || ||| |||| ||
Sbjct 195 ATATCCAGAAGGAGTCTACTCTTCACTTGGTTTTGAGATTGAGAGGTGG 243
>seq1
Length=1746572
Score = 91.5 bits (100), Expect = 1e-13
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
|| ||||| ||||||||||| ||| | || || || || || || | || ||||| ||
Sbjct 814061 AATATGCAAATTTTCGTTAAGACCTTGACCGGTAAGACCATTACCTTGGAGGTTGAGTCT 814002
Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727
| |||||| |||| | | || || || || ||||| || || | || || |||
Sbjct 814001 TCTGACACTATTGACAATGTCAAGCAGAAGATCCAAGACAAGGAGGGAATTCCACCTGAT 813942
Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787
|| ||| | || || ||||| || || || |||| || | | || || || |||
Sbjct 813941 CAGCAGAGATTGATCTTTGCTGGTAAGCAGTTGGAGGATGGCAGAACATTGTCAGACTAC 813882
Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837
||||| || || || ||||| || || ||||| || || ||| |||| ||
Sbjct 813881 AACATCCAGAAGGAATCCACCTTGCACTTAGTCTTGAGATTGAGAGGTGG 813832
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 338009286918608
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |