Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20naardenensis_20[genbank_20GCA_5F001753995.1_202016-
10-07] 76 sequences; 11,283,072 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq23 187 2e-42
>seq23
Length=838141
Score = 187 bits (206), Expect = 2e-42
Identities = 587/895 (66%), Gaps = 31/895 (3%)
Strand=Plus/Minus
Query 4257 TTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTT 4316
|| ||||| ||||| || | |||||||||||| || || || || | || || || |||
Sbjct 743035 TTCTGGTAATCGGAAACCCTCTTTTCGAAGAAGTTCGTCTTTCCAGCCAATGAGATGTTT 742976
Query 4317 TCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTTTCACACTTTAGAGCTACAAGC 4376
||||| ||||| || ||||| || |||||||| ||| || || ||| | | | |
Sbjct 742975 TCCATGAAATCGAATGGATTTGTAGCGTTGTAGACTTTGTCGCAGCCTAGGGAGAGTAAC 742916
Query 4377 AATCGGTCAGCTACA-AATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATTAA 4435
|||| ||| || ||| || || | ||| || ||| | || || || || || | |
Sbjct 742915 AATCTGTCGGC-ACAGAAGTCAACATATTGATACATCATATCACAATTCATACCCAAGAG 742857
Query 4436 TCTCACAGGTAGCGCGTATGTCAA-AAACTCTTGTTCTATAGTTACGGCTTCTGTGATTA 4494
||||||| || | | || | ||| |||| ||| ||| || ||||| || || |
Sbjct 742856 AGAAACAGGTAATGCATCTCTCCAGAAAGTCTT-TTCAATATCCACAGCTTCAGTCATGA 742798
Query 4495 TATCTT-----TTATTTTATCTTTAG-ATGGTTTATTTACTAAGTATCCAAACAATAAAC 4548
| ||| | ||||| | |||| | ||| | | | | || || |||| |
Sbjct 742797 T--CTTGGTGATGATTTTCTTATTAGGAGGGTGTTTCAAATGAGAG----AATAATAGGC 742744
Query 4549 ACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATC 4608
| || ||||| ||| |||||||||||||||| || |||||||| || || || | |
Sbjct 742743 AGGCGAAATCGGTATGTAAACCTTCGTCTCTGCAGATAAGTTCGTTCGAGAAGGTAAGAC 742684
Query 4609 CGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATA 4668
| ||||| ||||||||||| || |||||||| || || |||||||| || || ||||| |
Sbjct 742683 CTGGCATCAAACCTCTCTTCTTTAGCCAAAAGATGGCCGCAAATGAACCGGAGAAGAAGA 742624
Query 4669 TGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCG-AACGAGCTGGCTTTGTCTTTA 4727
||||| | ||||| || || || |||| || | | || | ||| ||
Sbjct 742623 CACCTTCGATAGCGGCGAAGGCGACCAATCTTTCTGCGTATAGTGC-ATCCTTGCTGTTG 742565
Query 4728 ATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTA 4787
||||| | ||||| || |||| ||||| ||||| || | || || |||
Sbjct 742564 ATCCAACGAAGAGCCCATAATGCCTTTTCCTTAATTGGGGGAATAGTTTCAATGGCATTA 742505
Query 4788 AATAATTTA----CTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATA 4843
||||| | | || ||| || ||| | || || || | | || |||
Sbjct 742504 AATAAGTAATCAGATTCCTTCTTATCTGTC----ACGTAGGTTTCAAGCAAGAGAGAATA 742449
Query 4844 CATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGT 4903
| |||||||| || || || | ||||| |||||||| ||| ||||| ||||
Sbjct 742448 GGTCTCAGAATGGATGTTCTCCACCATGATCTGGAATCCGTAGAAGGCCCTAGCCTCTGG 742389
Query 4904 TACTTGAAC-TTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGG 4962
| ||||| ||| | || | ||| | || || || | || ||||| ||| ||
Sbjct 742388 CAGCTGAACGTTCTGTGTGAAGT-TTTGAATCAAATTCTCATCAACGATACCATCAGAGG 742330
Query 4963 CTGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAAG---TTTTT 5019
| ||||| || ||||| ||| | | || || || ||| | | ||||| || |
Sbjct 742329 CGGCAAAGAAGGCCAACACACGTGCGATGAAATATCTTTCATTGGCATTAAGCTTGTTCT 742270
Query 5020 TCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCG 5079
|||||| || | ||| || | | ||| | ||||| ||||||| || || ||||| |
Sbjct 742269 TCCAGTCAGGAACATCCTTTGAGAGATCGATCTCTTCCGCAGTCCAGAAAGATGCTTCAG 742210
Query 5080 CTTTTTTGTACATAGACCAAATATCAGGATACTGAATCGGAAGTATGACAAATCT 5134
| || |||||||| |||||||||| || || || || | |||||||||||
Sbjct 742209 CCTTCTTGTACATCTGCCAAATATCATCGTATTGGATAGGGAACATGACAAATCT 742155
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427049204445308
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |