Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brettanomyces_20naardenensis_20[genbank_20GCA_5F001753995.1_202016- 10-07] 76 sequences; 11,283,072 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq16 91.5 1e-13 >seq16 Length=109755 Score = 91.5 bits (100), Expect = 1e-13 Identities = 188/278 (68%), Gaps = 14/278 (5%) Strand=Plus/Minus Query 27104 TGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGT 27163 |||| || ||||| || ||| | | ||| || || || | |||||| || | || Sbjct 15205 TGGGGAACGGTCTTGGGATCCTGGCAATCTGTGTTTTAAGGGCTTCCACATGGTTACAGT 15146 Query 27164 AGACGTGAGCGTCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGAC-GTGA 27222 | ||||||| ||||||| | ||||| || || || ||||| | | || ||| Sbjct 15145 ACACGTGAGAATCTCCCATGACATGGACGAATTCACCAGGTTCCATATTGCACACTGTG- 15087 Query 27223 GCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATG 27282 || |||||||| ||||| |||| ||| ||| ||||||||||| || || || ||||| Sbjct 15086 GCTATCATGTAGGTGAGTAGAGCGTAAGAGGCAATGTTAAAGGGAACACCAAGACCCATA 15027 Query 27283 TCCCCCGACCTCTGGTAGAGCTGACA-------CGAGAGCTCTCC-----ATCGCTTACG 27330 || | ||| |||||||| | ||| || | | | ||| | ||| ||| Sbjct 15026 TCGCACGATCTCTGGTACATCTGGCAATTCAACCTCGGCTTGTCCGATTTAAAGCTGACG 14967 Query 27331 TAAAACTGACATATGGCGTGGCACGGAGGAAGAGCCAT 27368 || ||||| || | | |||| |||||||| || ||||| Sbjct 14966 TAGAACTGGCAGAAGACGTGACACGGAGGTAGTGCCAT 14929 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369506857743956