Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brettanomyces_20naardenensis_20[genbank_20GCA_5F001753995.1_202016-
10-07] 76 sequences; 11,283,072 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq15 120 7e-22
seq1 86.0 1e-11
>seq15
Length=115448
Score = 120 bits (132), Expect = 7e-22
Identities = 152/208 (73%), Gaps = 1/208 (0%)
Strand=Plus/Minus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| |||||||||||||| || ||||| ||||| || | | ||||| ||||||||||
Sbjct 451 CAAG-TGAAGAGTAGACTCCTTCTGGATATTGTAGTCAGAAAGTGTTCTACCATCTTCTA 393
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
|| ||||| ||||| | |||||||| || | | || ||||| || ||||| |
Sbjct 392 ACTGCTTACCGGCAAAGATCAATCTCTGCTGATCAGGAGGAATACCTTCTTTATCTTGGA 333
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
| |||||||| || | || | |||||||| || ||||| | || || |||||||
Sbjct 332 TCTTTTGTTTCACGTTATCGATCGTGTCTGAAGATTCGACTTCCAAGGTGATGGTTTTGC 273
Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104
| || | ||||| ||||| | ||||||
Sbjct 272 CTGTTAATGTCTTGACGAAAATCTGCAT 245
Score = 111 bits (122), Expect = 4e-19
Identities = 150/208 (72%), Gaps = 1/208 (0%)
Strand=Plus/Minus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| |||||||||||||| || ||||| ||||| || | | ||||| ||||||||||
Sbjct 223 CAAG-TGAAGAGTAGACTCCTTCTGGATATTGTAGTCAGAAAGTGTTCTACCATCTTCTA 165
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
|| ||||| ||||| | |||||||| || | | || ||||| || ||||| |
Sbjct 164 ACTGCTTACCGGCAAAGATCAATCTCTGCTGATCAGGAGGAATACCTTCTTTATCTTGGA 105
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
| |||||||| ||| | || | | || ||| ||| ||||| | || || || || |
Sbjct 104 TCTTTTGTTTCACATTATCGATCGTATCAGAAGACTCGACTTCCAAGGTGATGGTCTTAC 45
Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104
| || | ||||| ||||| | ||||||
Sbjct 44 CAGTCAATGTCTTGACGAAAATCTGCAT 17
>seq1
Length=1746572
Score = 86.0 bits (94), Expect = 1e-11
Identities = 139/200 (70%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 151908 GTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCG 151967
|| || || || ||||||||||| || | || ||||| ||||| || | || ||
Sbjct 813862 GTGGATTCCTTCTGGATGTTGTAGTCTGACAATGTTCTGCCATCCTCCAACTGCTTACCA 813921
Query 151968 GCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTG 152027
|| ||||| | |||||||| || | | ||||| ||||| ||||| || || || |||
Sbjct 813922 GCAAAGATCAATCTCTGCTGATCAGGTGGAATTCCCTCCTTGTCTTGGATCTTCTGCTTG 813981
Query 152028 ACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTC 152087
||| | || | |||| ||| ||| || || | ||||| || || || || | |||
Sbjct 813982 ACATTGTCAATAGTGTCAGAAGACTCAACCTCCAAGGTAATGGTCTTACCGGTCAAGGTC 814041
Query 152088 TTCACGAAGACCTGCATTTT 152107
|| ||||| | ||||| ||
Sbjct 814042 TTAACGAAAATTTGCATATT 814061
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153819676466996
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |