Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20dubliniensis_20[genbank_20GCA_5F000647555.1_202014-04-23]
778 sequences; 14,044,856 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq22 174 2e-38
>seq22
Length=82586
Score = 174 bits (192), Expect = 2e-38
Identities = 344/501 (69%), Gaps = 6/501 (1%)
Strand=Plus/Minus
Query 16674 TTTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCT 16733
|||||||||| ||| | ||||| || || |||||||| || | | || ||||| |
Sbjct 9501 TTTGGTAATCAGAAACTCTCTTTTCAAAGAAATTAGTTTTACCAGCCAATGAGATATTTT 9442
Query 16734 CCATGAAATCAAAAGGATTAGTAGC-TGAAAATATTTTAGAGTACCCCAGTTCGGCGATT 16792
|||| |||||||| ||||||||| | | |||| ||| | | || || | | | |
Sbjct 9441 CCATAAAATCAAATGGATTAGTAACATTGTAATACTTTTTATTTCCAAAGGCCA-CTAAT 9383
Query 16793 AATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGA 16852
|||| ||| || |||||||| | ||| |||||||| || || || |||||||| | | |
Sbjct 9382 AATCGATCAGCAACAAATTCAACATACTGGCACATCAAGTCACAATTCATTCCCAATAAA 9323
Query 16853 CGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATA 16912
||| ||||| || || | ||| || || ||| ||| || || || |||| ||
Sbjct 9322 GATACTGGAAGCGCATCGCTGAAATATTTTTTCTCAATAGTCACAGCCTCGGTAATGATT 9263
Query 16913 CTAGCAACTCGTTCCTCG-GACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAA 16971
| ||| | || || | || ||| ||| || | || || | || ||| || |
Sbjct 9262 TTCTCAA-TGATTTCTGGAGAAGGTTTATTCTTTAAATACGAGAATAACAAACAGGCATA 9204
Query 16972 ATCGCAATGTAATCCCT-CGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCA 17030
||| || ||||||| |||||| || || | ||| || ||||||||||| || ||||
Sbjct 9203 ATCCGTGTG-AATCCCTTCGTCTCGGCAAATCAATTCATTCGAAAATGTCAATCCTGGCA 9145
Query 17031 TCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCT 17090
|| || | |||||||||||| || || || || ||||| ||| || |||||||| |
Sbjct 9144 TCAACCCCCTTTTCTTTAACCAGAAAATTGCTGCAAACGAACCACTGAAAAATATACCTT 9085
Query 17091 CGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATT 17150
| |||| |||||||| | |||| || || ||| || || | || |||||||
Sbjct 9084 CAACGGCAGCAAACGCAACCAATCTCTCAGCATACAAAGCATCCTCGTCTTGAATCCACC 9025
Query 17151 TCTGCACCCACTCGGCTTTTT 17171
| |||| ||||||||||
Sbjct 9024 TGATGGCCCAATCGGCTTTTT 9004
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517540566869040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |