Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20dubliniensis_20[genbank_20GCA_5F000647555.1_202014-04-23]
778 sequences; 14,044,856 total letters
Query= NC_001350.1
Length=112930
Score E
Sequences producing significant alignments: (Bits) Value
seq78 163 2e-35
>seq78
Length=41181
Score = 163 bits (180), Expect = 2e-35
Identities = 298/432 (69%), Gaps = 7/432 (2%)
Strand=Plus/Minus
Query 101867 ACATAAAATTGACTTAATACATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAACA 101926
||||||||||||| ||||||||||| || || || ||||||||| || |||| |
Sbjct 31747 ACATAAAATTGACAAAATACATGACATGGAGGTAATGCCATTTTAGCAAAATCTGGTGGA 31688
Query 101927 TTCCAAGCACACATTAACATCCTTCTATCTGTAGGGTTTGTTTTTATAGTATCAATCAAC 101986
||||||||| |||| | || |||||||| ||| |||||||| | | | ||| |
Sbjct 31687 TTCCAAGCAGACATGATAATTCTTCTATCATAAGGATTTGTTTTCAATTTTTTAATAACA 31628
Query 101987 TGTTTTAATTGGTCAACTCCTTCTCCTTTATAATCGCGCCCAACACCTTTATATTCTGCT 102046
| || ||| || |||| ||||| || ||||||| || | |||||||||||||
Sbjct 31627 TCTTGTAACTGATCAAATCCTTGGCCACTATAATCAGAATCACAATCTTTATATTCTGCA 31568
Query 102047 CCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTCATAA 102106
|| ||||| ||||| || || ||||| || ||||| | ||| |||||| | | |
Sbjct 31567 CCAAAATGTCTCCATTGGAAACCATAAACTGGTCCCAAATCCCCTTCACGACGATGAGTC 31508
Query 102107 AAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATGTGCACGCCAGCT 102166
|| || | ||| |||||||| | ||||||||| | ||||| || | ||| || |
Sbjct 31507 AATCCTAATTTGTCTAAAAACTCACGAGATCCATTGCCTTCCCAGATTTTCACTCCCTTT 31448
Query 102167 --GCTGATAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAGTTCTTCAACAA 102224
||| | | | || || |||||||| || | |||||| || | ||| | || ||
Sbjct 31447 TCGCTTA-ATATTTTAGC-ATCAGTAGACCCAGCAACAAACCATAATAATTCATGAATAA 31390
Query 102225 CACCTCTCCAAAATACTCTCTTAGTAGTTAAAAGTGGAAA---TTCATTTTCTAAACTAA 102281
||| | |||| || | ||||| ||||| | ||||| |||||| |||| ||
Sbjct 31389 TCCCTTTTGAAAAAACCTTTTTAGTGGTTAATAAAGGAAAGGTATCATTTGATAAATCAA 31330
Query 102282 ACCTAGACTGTG 102293
| || ||||||
Sbjct 31329 ATCTTAACTGTG 31318
Score = 95.1 bits (104), Expect = 9e-15
Identities = 115/157 (73%), Gaps = 0/157 (0%)
Strand=Plus/Minus
Query 101684 GCATCAATGTGATCTACATAGATGTGAGCATCTCCTATAGTATGGATAAACTCTCCAGGC 101743
||||| || ||||| | ||||| || ||||| |||| |||||| || || || |||
Sbjct 31981 GCATCTATATGATCCAAATAGACATGTGCATCACCTAAAGTATGAATGAATTCGCCACAG 31922
Query 101744 ACTAGATTAGTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAAT 101803
| | || ||||| |||||||| |||||| | | ||| ||||| ||||||
Sbjct 31921 TCCATATCCACCACATGTGCAATCATCTTAGTTAACAACGCGTAGGATGCAATATTAAAT 31862
Query 101804 GGCACTCCTAACCCCATATCAGCTGATCTTTGATACA 101840
|| || ||||||||||||||| |||||||||||||
Sbjct 31861 GGTACACCTAACCCCATATCACAAGATCTTTGATACA 31825
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 361247774661278
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |