Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20dubliniensis_20[genbank_20GCA_5F000647555.1_202014-04-23] 778 sequences; 14,044,856 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq78 163 2e-35 >seq78 Length=41181 Score = 163 bits (180), Expect = 2e-35 Identities = 298/432 (69%), Gaps = 7/432 (2%) Strand=Plus/Minus Query 101867 ACATAAAATTGACTTAATACATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAACA 101926 ||||||||||||| ||||||||||| || || || ||||||||| || |||| | Sbjct 31747 ACATAAAATTGACAAAATACATGACATGGAGGTAATGCCATTTTAGCAAAATCTGGTGGA 31688 Query 101927 TTCCAAGCACACATTAACATCCTTCTATCTGTAGGGTTTGTTTTTATAGTATCAATCAAC 101986 ||||||||| |||| | || |||||||| ||| |||||||| | | | ||| | Sbjct 31687 TTCCAAGCAGACATGATAATTCTTCTATCATAAGGATTTGTTTTCAATTTTTTAATAACA 31628 Query 101987 TGTTTTAATTGGTCAACTCCTTCTCCTTTATAATCGCGCCCAACACCTTTATATTCTGCT 102046 | || ||| || |||| ||||| || ||||||| || | ||||||||||||| Sbjct 31627 TCTTGTAACTGATCAAATCCTTGGCCACTATAATCAGAATCACAATCTTTATATTCTGCA 31568 Query 102047 CCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTCATAA 102106 || ||||| ||||| || || ||||| || ||||| | ||| |||||| | | | Sbjct 31567 CCAAAATGTCTCCATTGGAAACCATAAACTGGTCCCAAATCCCCTTCACGACGATGAGTC 31508 Query 102107 AAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATGTGCACGCCAGCT 102166 || || | ||| |||||||| | ||||||||| | ||||| || | ||| || | Sbjct 31507 AATCCTAATTTGTCTAAAAACTCACGAGATCCATTGCCTTCCCAGATTTTCACTCCCTTT 31448 Query 102167 --GCTGATAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAGTTCTTCAACAA 102224 ||| | | | || || |||||||| || | |||||| || | ||| | || || Sbjct 31447 TCGCTTA-ATATTTTAGC-ATCAGTAGACCCAGCAACAAACCATAATAATTCATGAATAA 31390 Query 102225 CACCTCTCCAAAATACTCTCTTAGTAGTTAAAAGTGGAAA---TTCATTTTCTAAACTAA 102281 ||| | |||| || | ||||| ||||| | ||||| |||||| |||| || Sbjct 31389 TCCCTTTTGAAAAAACCTTTTTAGTGGTTAATAAAGGAAAGGTATCATTTGATAAATCAA 31330 Query 102282 ACCTAGACTGTG 102293 | || |||||| Sbjct 31329 ATCTTAACTGTG 31318 Score = 95.1 bits (104), Expect = 9e-15 Identities = 115/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 101684 GCATCAATGTGATCTACATAGATGTGAGCATCTCCTATAGTATGGATAAACTCTCCAGGC 101743 ||||| || ||||| | ||||| || ||||| |||| |||||| || || || ||| Sbjct 31981 GCATCTATATGATCCAAATAGACATGTGCATCACCTAAAGTATGAATGAATTCGCCACAG 31922 Query 101744 ACTAGATTAGTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAAT 101803 | | || ||||| |||||||| |||||| | | ||| ||||| |||||| Sbjct 31921 TCCATATCCACCACATGTGCAATCATCTTAGTTAACAACGCGTAGGATGCAATATTAAAT 31862 Query 101804 GGCACTCCTAACCCCATATCAGCTGATCTTTGATACA 101840 || || ||||||||||||||| ||||||||||||| Sbjct 31861 GGTACACCTAACCCCATATCACAAGATCTTTGATACA 31825 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361247774661278