Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20dubliniensis_20[genbank_20GCA_5F000647555.1_202014-04-23] 778 sequences; 14,044,856 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq65 423 2e-113 seq241 277 2e-69 seq22 190 2e-43 seq30 93.3 5e-14 >seq65 Length=45114 Score = 423 bits (468), Expect = 2e-113 Identities = 1410/2186 (65%), Gaps = 27/2186 (1%) Strand=Plus/Minus Query 52847 TAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTG 52906 || ||||| || || || | ||| |||| || || ||||||||||| || | || Sbjct 20402 TAATACATACCAGTCTTCAAACCTTTCTTCCAACCATAGAAATGCATACTGGTCAACTTA 20343 Query 52907 GAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCC 52966 | || ||| || || || || | |||||| |||||| || || || | Sbjct 20342 CCCATTGTTGGGTCTTTGATGTGAATGTTTAATGATTGAGATTGATCAATAAATGCAGCT 20283 Query 52967 CTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACT 53026 || || |||||||| | || || |||||||| |||||||| | ||| || || | | Sbjct 20282 CTATCAGCAGCCATGTCGATAATATGCTTTTGTGAGATTTCCCAGACAGTCTTGTACAAT 20223 Query 53027 CGCTTAATATCTTCTGGAAGGTTTGT---ATTCTGAATAGATCCACCATCTACCATAATC 53083 |||||| || || |||| ||||| | |||||||| || | | ||||| Sbjct 20222 GCCTTAATTTCATCAGGAATGTTTGGCAAAGCTTGAATAGAACCGTTGTTAGCAATAATA 20163 Query 53084 CTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGA 53143 ||| | || || |||||||||| | || ||| | | | | || ||| Sbjct 20162 CTACTTTTCATAGCATCATTCCAGACACCCAAATCAACCAAATCCTTCAACAAATATGGA 20103 Query 53144 TTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGT 53203 || || | |||||||||||| | || ||||| | | |||||| ||| || || ||| Sbjct 20102 TTGACAATTTGAAATTCTCCTGCTAACACTCTTCTGGAGTAAATGTTAGAAGTGTATGGT 20043 Query 53204 TCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACC 53263 || | | ||||||| || ||||||||||| | || || ||||| ||||| || || || Sbjct 20042 TCGAAACACTCATTGTTACCCAAAATTTGTGATGTAGAAGCAGTAGGCATTGGAGCAACT 19983 Query 53264 AATAAACTATTTCTAAGACCGTATGTTCTG--ATTTTATCTTTTAGAGGTTCCCAATTCC 53321 ||||| ||||| | ||| ||| | | | || | ||||| | ||||||| || Sbjct 19982 AATAAGGAGTTTCTCATACC--ATGCTTAGCCAAATTTTGTTTTAATGTATCCCAATCCC 19925 Query 53322 AAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACG 53381 | | || | ||| |||| | ||| | | ||| | Sbjct 19924 ATAATTCAGTTGGTTTTCTGTTCCATAAATCAAACTGTAATAAACCTTGAGAGGCAGGGG 19865 Query 53382 ATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATG 53441 | ||| ||| || ||||| | ||||| | | ||| | |||| | || || | | Sbjct 19864 AGCCTGGATAAGTTTCGTAGGCACCTTCTTCTTTAGCCAATTCAACAGAAGCTTCAACAG 19805 Query 53442 CACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAA 53501 || | | ||||| || ||||| || | | |||| ||| ||||| || |||| Sbjct 19804 CAGCATGGTAAATAGTCTCGAAAATTTGAATGTTTAATTCTCTGGCTTCTTGGGAGTCAA 19745 Query 53502 ATGGATAATTT-AAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGT 53560 |||| |||| | || ||||| || || || || ||||||||||| | | | || ||| Sbjct 19744 ATGG-TAATCTCAATTCCATAAAGGCATCAGCCAAACCTTGAACACCCAAAGCAATTGGT 19686 Query 53561 CTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATT 53620 || |||||| |||| || |||| |||||||||| || |||| || || |||| | Sbjct 19685 CTGTGTCTCATATTTGATCTTTCGGCTTCTGGAACTGGGTAATGGTTGCGGTCAATAACT 19626 Query 53621 TTATTGAGGTTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAAT-----CAA 53675 | || | ||| | | | ||| ||| ||||| | | || ||| | ||| Sbjct 19625 CTGTTCAAGTTACGGGTGACTACCTTGGTGACATCATGTAACTTATCAAAGTTGTACCAA 19566 Query 53676 ATTGTCC----ATCTATTACAA-ACATGTTC--AATGCAATAGATGCCAGATTACAAACG 53728 | | | ||| || ||| | ||| | || ||||| || |||| |||||||| Sbjct 19565 GTATTACTTTGATCGCTTTCAACAAATGATGGTAAAGCAATGGAGGCCAAGTTACAAACA 19506 Query 53729 GCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATG 53788 || || |||| | | | | ||||| | || ||| || | || | | || || Sbjct 19505 GCGACTTCATCTGGAGCAGAATATTCAACAATTTCACAACATAAGTTGGAAGATTTAATA 19446 Query 53789 GTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGC 53848 | || || || | ||| || || |||||||| | ||| || || | || ||||| Sbjct 19445 ATACCCAAGTTCTTTTGGTTGGATTTGTTGTTACATGAATCTTTGTACAACATAAATGGA 19386 Query 53849 GTACCAGTTTCAATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATA 53908 ||||| ||||| | |||| | | | || || | ||| | | ||||| || | Sbjct 19385 GTACCCGTTTCTGTTTGGGCTCCCAAGATAGCGTACCACAATTTTTGGGCCTTGATGGTC 19326 Query 53909 GATTTGTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCAAACTCGTCTCCCCAA 53968 | || | |||||| |||||||| ||||| ||| ||| || ||||| || || Sbjct 19325 TGTCTGCCACGGTTTTCTTTTTCGTATCTGGTATATAATTCTTCGAATTCGTCACCGTAA 19266 Query 53969 ACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTC 54028 |||| |||| || || |||| || | | ||| | ||| || |||| | | Sbjct 19265 ACATCAGCCAAACCTGGGGCCTCATTTGGTGAGAACAAAGTCCAATCACCGTTTTGTTCG 19206 Query 54029 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGT 54088 |||| |||||| || | || |||||||| | |||| || | |||||||| ||| | Sbjct 19205 ACTCTTTTCATGAACAAGTCTGGAATCCATAAAGCTGGGAACAAATCTCTGGCTCTGATT 19146 Query 54089 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGT 54148 || || || || ||||||| | | || | ||| | | || ||| ||||| ||| Sbjct 19145 TCTTCTTTACCATGATTCTTTCTGATGTCAATGAAATCAAAGATGTCACTGTGCCATGGT 19086 Query 54149 TCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCG 54208 || ||||| | || | | ||||| | |||||| || || ||||| | || | || Sbjct 19085 TCTAAGTACAAGGCAAAGGCACCAGGTCTTTTGTTACCACCTTGATCAACATAACGTGCA 19026 Query 54209 GTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAG 54268 |||||||| | ||||| | |||||||||||||||||| || | ||||||||| || | Sbjct 19025 GTGTTATTGAACACTCTTACCATTGGAATAATACCATTAGAAGTACCATTGGTACCAGCA 18966 Query 54269 ATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTA 54328 || || ||| | | |||||| || || || ||| ||||| ||||| |||| Sbjct 18965 ATGTAAGCACCAGTAGAACGAATGTTGTGGATATGTAAACCAATCCCTCCTGCACTTTTT 18906 Query 54329 GAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATG 54388 || || || || || |||||| |||||||| || || || ||| ||||||| |||| Sbjct 18905 GAAATCAAAGCACACGATTTTAAAGTATCATATATACCTTCAATAGAATCATCCTTCATA 18846 Query 54389 TTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGA 54448 ||| | || || ||||||||| | | || || ||||| || ||| |||| Sbjct 18845 GCAAGCAAGAAGCATGAAGACATTTGCGGTCTTGGTGTACCAGCATTGAACAAGCAAGGA 18786 Query 54449 GAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATA 54508 ||| | || ||||| || ||| ||| | | || || || || || || |||| Sbjct 18785 GAACCATGGGTAAAGAATCTTTGAGACATCAAGTTATAGGTTTCAATGACTCTTGGTATA 18726 Query 54509 TCCCATT--GATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGA 54566 | |||| || || || || ||||| | ||| | || || || |||||||| | | Sbjct 18725 T--CATTACCGTGGATACCAACAGCGACTCTCATGATCAAATGTTGGGGTCTTTCGGCAA 18668 Query 54567 TCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGT 54626 ||| ||| || | ||| || ||| ||||||||||||| || |||||||| |||| Sbjct 18667 CCTTACCGTTGATACGTAACAAATAAGATCTTTCCAAAGTTTTGAACCCAAAATAATTGT 18608 Query 54627 ATGAAAAGTCTCGTTCGTAAATAATAACTGAGTTGAGTTTATCCTTATATTTGTTAACTA 54686 | ||| |||| ||||||| ||| | ||||| | || ||| | | || ||| || Sbjct 18607 AGCTAAAATCTCTGTCGTAAACAATGGCCGAGTTTAATTCATCTTCGTGTTCCATAA-TA 18549 Query 54687 CATCCATGGTAATACTT-GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAG 54745 ||| | | ||| ||||| || ||||| || ||| | |||||||| | ||| Sbjct 18548 ATGTCATAGGTTTCCTTGGAAATCATAGGAGAGTGCAACCCGGTCTTAGGATTAATATAC 18489 Query 54746 TTAAATAAATCCTTCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGAT 54805 | | |||||||||| |||| | | |||| | |||| ||||||| ||||||| Sbjct 18488 TCATATAAATCCTTAGATACTTTGGAATACTGTTTGGTGGTTTGCTTGTGTAAATTTGAT 18429 Query 54806 ACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCT 54865 ||||| ||||||||||||| | |||||||| ||||| ||| || || || || Sbjct 18428 ACGGCAATTCTAGCGGCTAACACAGCATAATCAGGATGAATTGTTGTCATTGTAGCAGCA 18369 Query 54866 ATTTCGGCTGTCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGGATA 54925 ||||| || | || | ||||| || | || || || || | || | ||| ||| Sbjct 18368 ATTTCTGCAGCCAAGTTATCCAACTCGATAGTAGTAACCCCCTGGTAAACACCTGATATA 18309 Query 54926 ACCTTCATAGCTATTTTAATAGGATCTATATGATCAGTGTTTAAGCCATAACATAATTTT 54985 || || | || || || || | |||| | ||||| || ||||||||| || Sbjct 18308 ACTTTTTGGGTAATAGCAACTGGTTCAACGTGATTTGGATTTAAACCGTAACATAATCTT 18249 Query 54986 CTAATACGAGATGTGATTTTATCAAA 55011 || | || |||||||| ||||| Sbjct 18248 TGAACTCTAGCGGTGATTTTGTCAAA 18223 >seq241 Length=19529 Score = 277 bits (306), Expect = 2e-69 Identities = 598/891 (67%), Gaps = 10/891 (1%) Strand=Plus/Plus Query 23831 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTC 23890 |||||| || ||||||||| || || | |||||| || ||||| || ||||| | Sbjct 8906 CATAACACCAGCTTTTTGGTAGTCTGAAACTCTTTTTTCAAAGAAATTGGTCTTACCAGC 8965 Query 23891 TAATGATATATTTTCCATGAAATCGGATGGATTGGTAACATTATAGA--TTCTTTTAAAT 23948 || || || |||||||||||||| ||||||| |||||||| || | ||||| | | Sbjct 8966 CAAAGAAATGTTTTCCATGAAATCAAATGGATTAGTAACATTGTATACTTTCTTGTTA-- 9023 Query 23949 CCCAATTCAGAAATCAATCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAA 24008 || || | | | ||||||||| ||||| || || || ||| ||||| | ||| Sbjct 9024 CCTAAGGCCAACAACAATCTATCAGCGACGAATTCAATGTATTGACACATCAAGTTACAG 9083 Query 24009 TTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACC 24068 ||||| || | | ||||||||||| | |||| | |||| |||| | || Sbjct 9084 TTCATACCCAACAAGGACACTGGAAGAGCATCGGTAAAGTACTCTTTCTCAACATCAACA 9143 Query 24069 GCGTCTGTTATAATAGATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAAC 24128 || || || ||||| | || | ||| | ||| | ||||| |||| Sbjct 9144 GCTTCAGTAATAATTTTTTCAACAATCTCTGGAGATGGTCTGTTTTGCAAATGAGCAAAC 9203 Query 24129 ATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAAC 24188 | ||||| || || || ||||| ||| || ||||| | ||| || ||||| || || Sbjct 9204 AATAAACAAGCAAAGTCAGTGTGTAAACCTTCATCTCTGCAAATCAACTCGTTTGAGAAA 9263 Query 24189 GTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAA 24248 || | || ||||||| || | |||||| | ||| || || || |||||||| ||| | Sbjct 9264 GTCAACCCTGGCATTAAACCTCTCTTTTTCAACCAGAAGATAGAAGCAAATGAACCACTA 9323 Query 24249 AAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGGCGCTGTCA 24308 |||||||| ||||| ||||| |||||||||| | |||||| ||||| ||| ||| Sbjct 9324 AAGAAAATACCTTCAACTGCAGCAAAGGCAACTAATCTTTCACCATACAAGGCTTCATCA 9383 Query 24309 TGT---ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATA 24365 | | ||||| || |||||| || || ||||||| | ||| || || | | || Sbjct 9384 TCTTGAATCCATTTGATAGCCCAGTCAGCTTTCTTTTGAATACATGGAATATTGGCAATG 9443 Query 24366 GCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTA 24425 |||||||| | || | ||| | | |||||| | || || ||||| || | | Sbjct 9444 GCATTAAATAAGTAATCGGCTTCTTGAGGATCTTTTATGTAAGTTTCAATTAATAAAGAG 9503 Query 24426 TACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCG 24485 || |||| |||||||||||||| || ||||| || |||||||| || | || ||| Sbjct 9504 TAGGTTTCTGAATGAATGTTTTCCATCATGATTTGGAAACCGTAGAATGATTTGGCTTCG 9563 Query 24486 GTAATCTGTACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTG 24545 | || || ||||| | | || ||| ||| |||||| || || || ||| Sbjct 9564 GGAAGTTGAACTTCAGTCGAGAAGTTTTCAATTAAGTTTTCACCAACAATACCATCAGAA 9623 Query 24546 GCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGT---TTA 24602 || || ||||| |||||||| | ||||||| |||| | | | | | ||| Sbjct 9624 GCAGCGAAAAATGCCAATACTCTAGAGACAAAATATCTTTCATTTTCATTCAATTTGTTA 9683 Query 24603 TTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCT 24662 ||||| |||| | ||||||| | ||| | |||||| | ||||| || || || || Sbjct 9684 TTCCAGTCATCCAAATCTTTACTCAAATCGATTTCTTCGGCGGTCCAGAAAGAAGCTTCA 9743 Query 24663 GCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACA 24713 || || ||||| | ||||| || ||||| ||| ||||| || || ||| Sbjct 9744 GCTTTCTTATAAAAGTTCCAAATTTCATGGTATCTGATTGGGAACATCACA 9794 >seq22 Length=82586 Score = 190 bits (210), Expect = 2e-43 Identities = 571/871 (66%), Gaps = 14/871 (2%) Strand=Plus/Minus Query 23844 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 23903 |||||||| ||| || | ||||| || |||||||||||||| | ||||| |||||| Sbjct 9502 TTTTGGTAATCAGAAACTCTCTTTTCAAAGAAATTAGTTTTACCAGCCAATGAGATATTT 9443 Query 23904 TCCATGAAATCGGATGGATTGGTAACATTATAGATTCTTTTAAATCCCAA--TTCAGAAA 23961 ||||| ||||| ||||||| |||||||| || || ||||| | | |||| || || Sbjct 9442 TCCATAAAATCAAATGGATTAGTAACATTGTA-ATACTTTTTATTTCCAAAGGCCACTAA 9384 Query 23962 TCAATCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAATTCATT-CCTATA 24020 | |||| ||| || ||||| || | ||| ||||| |||||||||||| || ||| Sbjct 9383 T-AATCGATCAGCAACAAATTCAACATACTGGCACATCAAGTCACAATTCATTCCCAATA 9325 Query 24021 AGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATA 24080 | | |||||||| || | | | | ||| || ||||||| || || || || || Sbjct 9324 AAGAT-ACTGGAAGCGCATCGCTGAAATATTTTTTCTCAATAGTCACAGCCTCGGTAATG 9266 Query 24081 ATAGATCTTACTG-TTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGC 24139 || ||| | || ||||| | ||| || | ||||| || | |||||| || Sbjct 9265 AT-TTTCTCAATGATTTCTGGAGAAGGTTTATTCTTTAAATACGAGAATAACAAACAGGC 9207 Query 24140 GAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGG 24199 |||| ||| | || ||||||| | ||| ||||| || ||||| || | ||| || Sbjct 9206 ATAATCCGTGTGAATCCCTTCGTCTCGGCAAATCAATTCATTCGAAAATGTCAATCCTGG 9147 Query 24200 CATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCC 24259 ||| | || | || || | ||| || || | ||||| || ||| || || || || Sbjct 9146 CATCAACCCCCTTTTCTTTAACCAGAAAATTGCTGCAAACGAACCACTGAAAAATATACC 9087 Query 24260 TTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCAT---AACCGGCGCTGTCATGTATCCA 24316 ||| || || ||||| |||| | ||| || ||| || | | ||| || ||||| Sbjct 9086 TTCAACGGCAGCAAACGCAACCAATCTCTCAGCATACAAAGCATCCTCGTCTTGAATCCA 9027 Query 24317 CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAG 24376 | | ||||||||||| || | | | | | || || | || ||||||||||| | Sbjct 9026 CCTGATGGCCCAATCGGCTTTTTCTCTGATGAATGGGATATTTTCAATAGCATTAAACAA 8967 Query 24377 ATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGA 24436 | ||| ||| | || || | ||||| || || || | ||| | || || Sbjct 8966 AAAGTCCGCTTCTTCTGGGTCCTTGAAGTATGTTTCGATTAACAACGAATAAGTCTCTGA 8907 Query 24437 ATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTAC 24496 ||| |||||||| || || ||||| ||| | | |||||| | || ||||| Sbjct 8906 ATGGATGTTTTCCATCATGATCTGAAACTTGTATACCAGTTGAGCCTCTGGTATTTGTAC 8847 Query 24497 TTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAA 24556 ||| ||| || ||| | || || ||||| || || || || ||| ||||| || Sbjct 8846 TTCAGCACAGAAATTTTCCACCAAGTTCTCATTGACAATACCATCCGAGGCAGCAAAGAA 8787 Query 24557 CGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTA---TTCCAATCATT 24613 ||||| || | || ||| || |||| | | | | |||| ||||| || Sbjct 8786 TGCCAACACTCGGGAGATGAAAAATCTTTCATTTTCGTTCATTTTATTGTTCCAGTCGGC 8727 Query 24614 GATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATA 24673 | ||||||| || || | ||||| |||||||||| || ||| | |||||| || Sbjct 8726 CAAATCTTTACTTAAGTCAAGCTCTTCAGCTGTCCAAAACGAGGCCAACGACTTTTTGTA 8667 Query 24674 CATATTCCAGATGTCATGATATTGAATTGGA 24704 | | ||| | || |||| | ||| ||| Sbjct 8666 GAATTGCCATAACTCCGGATACTTAATAGGA 8636 >seq30 Length=68702 Score = 93.3 bits (102), Expect = 5e-14 Identities = 186/273 (68%), Gaps = 2/273 (1%) Strand=Plus/Minus Query 54023 TCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTAT-AAATAGATCTCTGGT 54081 || ||||| ||||||||||| | || || ||||| | | | || ||| | |||||| || Sbjct 1433 TCTTTCACACGTTTCATAAACAAGTCGGGTATCCATA-ATCCATAAAACAAATCTCTAGT 1375 Query 54082 TCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATG 54141 ||| ||| || || || ||| ||| | | || | || | | ||||||| ||| Sbjct 1374 TCTCATTTCTTCATTCCCGTGATTTTTTCTCATTTCTAAGATATCAAAAATATCACCATG 1315 Query 54142 CCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTA 54201 ||| ||||| | ||||||| | |||| || ||||| || || ||||| | || Sbjct 1314 CCATGGTTCTATATATATGGCAAATGCTCCTGGACGTTTACCCCCACCTTGATCGACATA 1255 Query 54202 TCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGT 54261 ||| || || ||||| ||||| | |||||| || | | || || || ||||||||| Sbjct 1254 TCTTGCAGTATTATTGTAAACACGCAACATGGGTACTAACCCGTTTGAACTACCATTGGT 1195 Query 54262 CCCGGAGATATAGCTTCCACTGGCACGAATATT 54294 || | ||||| ||| ||| | |||||| Sbjct 1194 GCCAGCAATATACGCACCATTGGATCTAATATT 1162 Score = 87.8 bits (96), Expect = 2e-12 Identities = 256/394 (65%), Gaps = 3/394 (1%) Strand=Plus/Minus Query 52928 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 52987 || ||||||||| ||| |||||| | || ||| || ||||||||||| | ||| Sbjct 2540 TGTATATTCATACTTTGCAGTTGATCAACAAATTTTCCTCTATCTGCAGCCATATCAATG 2481 Query 52988 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 53047 ||| ||||||| | |||||| | |||||||| | | | || || || || || | Sbjct 2480 ATCACTTTTTGTGACAATTCCCACACGGTTTTATATAATTGTTTGATTTCGTCAGGTATA 2421 Query 53048 TT---TGTATTCTGAATAGATCCACCATCTACCATAATCCTATTCTTGATCTCATCATTC 53104 || | | || ||||| |||||| || | |||||| |||| | || | || | Sbjct 2420 TTGGGTATTTTTTGAATTGATCCATTTTCCATAATAATCTTATTTCTCATAGCTGAATCC 2361 Query 53105 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCA 53164 || | | || ||||| || ||| | || | || || | |||| ||||||| Sbjct 2360 CAAATTCCAAGATCCATTAAATCTTTAATTAAATACTTGTTGACAATTTGATATTCTCCC 2301 Query 53165 GACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCCC 53224 | || |||| ||| | || | || ||||| || || | | ||||| ||| Sbjct 2300 GCTAACACTCGACGATTATACAAGTTTGAAGTATAAGGCTCAAAGCATTCATTGAATCCA 2241 Query 53225 AAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCG 53284 | |||||| | ||||||||| |||||||| || || || | ||| ||||| | ||| Sbjct 2240 AGAATTTGGGAAGTTGATGCCGTCGGCATCGGAGCTACTAGTAATGAGTTTCTTAAACCA 2181 Query 53285 TATGTTCTGATTTTATCTTTTAGAGGTTCCCAAT 53318 | || || || || |||| || | ||||| Sbjct 2180 AAATTTTGAATGTTGTCCTTTAAAGCATTCCAAT 2147 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593715826057440