Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20dubliniensis_20[genbank_20GCA_5F000647555.1_202014-04-23] 778 sequences; 14,044,856 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq78 170 2e-37 >seq78 Length=41181 Score = 170 bits (188), Expect = 2e-37 Identities = 286/405 (71%), Gaps = 14/405 (3%) Strand=Plus/Plus Query 20044 TTTCCCTTATTAACTACGAAACGGGTATTTTGGAAAGGCGTTGTTGAAGAGTTATTATGG 20103 ||||| |||||||| || ||| ||| |||| ||||| || || | || ||||||||| Sbjct 31350 TTTCCTTTATTAACCACTAAAAAGGTTTTTTCAAAAGGGATTATTCATGAATTATTATGG 31409 Query 20104 TTTATTAAAGGATCAACAAATTCTACCGAGCTTGTA---GAAAAAGGAGTTAAGATTTGG 20160 ||| || || || || || ||| | | || ||||| ||||| || || ||| Sbjct 31410 TTTGTTGCTGGGTCTACTGATGCTA---AAATATTAAGCGAAAAGGGAGTGAAAATCTGG 31466 Query 20161 -AGCGCACATGGATCTAAGCAATTTTTACACAGCAAT--GGATTTGACA-ACCGTCAAGA 20216 | ||| |||||||| | |||||| ||| ||| ||||| ||| | |||| || Sbjct 31467 GAAGGCA-ATGGATCTCGTGAGTTTTTAGACA--AATTAGGATT-GACTCATCGTCGTGA 31522 Query 20217 GGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGA 20276 ||||||||||| || || ||||| || ||||||||||||||||| || |||||| || Sbjct 31523 AGGGGATTTGGGACCAGTTTATGGTTTCCAATGGAGACATTTTGGTGCAGAATATAAAGA 31582 Query 20277 CATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATTTAAT 20336 | | ||||| ||| |||||| | ||||| |||||| |||||||||| | | Sbjct 31583 TTGTGATTCTGATTATAGTGGCCAAGGATTTGATCAGTTACAAGATGTTATTAAAAAATT 31642 Query 20337 TAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGTGCC 20396 ||||| || || | || ||||||||||| | | || ||||| | |||| | | Sbjct 31643 GAAAACAAATCCTTATGATAGAAGAATTATCATGTCTGCTTGGAATCCACCAGATTTTGC 31702 Query 20397 TTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGT 20441 | |||||| || |||||||||||| | | || |||||||| || Sbjct 31703 TAAAATGGCATTACCTCCATGTCATGTATTTTGTCAATTTTATGT 31747 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399180214987210