Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20dubliniensis_20[genbank_20GCA_5F000647555.1_202014-04-23] 778 sequences; 14,044,856 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq22 284 1e-71 seq241 277 2e-69 >seq22 Length=82586 Score = 284 bits (314), Expect = 1e-71 Identities = 504/727 (69%), Gaps = 10/727 (1%) Strand=Plus/Minus Query 13913 TTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTT 13972 ||||| || ||| |||||| ||||||||||| ||||||||||| ||| ||| |||||| Sbjct 9502 TTTTGGTAATCAGAAACTCTCTTTTCAAAGAAATTAGTTTTACCAGCCAATGAGATATTT 9443 Query 13973 TCCATAAAATCAAATGGATTTGTTGACATA--AACACTTTATCACAACCTAGTTCTAATA 14030 |||||||||||||||||||| || |||| || ||||| | | || | | | || Sbjct 9442 TCCATAAAATCAAATGGATTAGTA-ACATTGTAATACTTTTT-ATTTCCAAAGGCCACTA 9385 Query 14031 GTAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTA 14090 ||||| ||| |||| || |||| ||| || |||| || ||||||||||| || | || Sbjct 9384 ATAATCGATCAGCAACAAATTCAACATACTGGCACATCAAGTCACAATTCATTCCCAATA 9325 Query 14091 GTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAA 14150 ||| |||| || | | ||| ||| ||| || |||| |||||||||| | || | Sbjct 9324 AAGATACTGGAAGCGCATCGCTGAAATATTTTTTCTCAATAGTCACAGCCTCGGTAATGA 9265 Query 14151 TAATCGTAATAATTTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAA 14210 | || ||| ||||| |||||| || |||| || || | ||||| ||| Sbjct 9264 TTTTCTCAATGATTTCTGGAGAAGGTTTATTCTTTAAATACGAGAATAACAAACAGGCAT 9205 Query 14211 AATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCA 14270 |||| |||| || || |||| | ||| | ||| || |||||||| |||||||||| Sbjct 9204 AATCCGTGTGAATCCCTTCGTCTCGGCAAATCAATTCATTCGAAAATGTCAATCCTGGCA 9145 Query 14271 TCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCT 14330 |||| || | ||| |||||||| || ||||| || || || || || ||||| || | Sbjct 9144 TCAACCCCCTTTTCTTTAACCAGAAAATTGCTGCAAACGAACCACTGAAAAATATACCTT 9085 Query 14331 CAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGT-TCGATATCCAT 14389 |||| ||||||||||| | |||| || || || | || | | || | || ||||| Sbjct 9084 CAACGGCAGCAAACGCAACCAATCTCTCAGCATACAAAGCATCCTCGTCTTGA-ATCCAC 9026 Query 14390 TTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAA 14449 | | ||||| || | ||||| | | || || || |||||||||||||||| ||| Sbjct 9025 CTGATGGCCCAATCGGCTTTTTCTCTGATGAATGGGATATTTTCAATAGCATTAAACAAA 8966 Query 14450 TGTTC--CTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAG 14507 || ||||| | || |||||| |||||| || || | || ||| | || | Sbjct 8965 AAGTCCGCTTCTTCTGGGTCCTTGAA--GTATGTTTCGATTAACAACGAATAAGTCTCTG 8908 Query 14508 AGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTA 14567 | || ||||||||||| |||||||| || | | ||| |||| ||||| Sbjct 8907 AATGGATGTTTTCCATCATGATCTGAAACTTGTATACCAGTTGAGCCTCTGGTATTTGTA 8848 Query 14568 CCTCTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAA 14627 | || | | || |||| |||| || ||||| || |||||||| || ||||| | Sbjct 8847 CTTCAGCACAGAAATTTTCCACCAAGTTCTCATTGACAATACCATCCGAGGCAGCAAAGA 8788 Query 14628 ATGCCAA 14634 ||||||| Sbjct 8787 ATGCCAA 8781 >seq241 Length=19529 Score = 277 bits (306), Expect = 2e-69 Identities = 575/850 (68%), Gaps = 7/850 (1%) Strand=Plus/Plus Query 13901 ATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCC 13960 ||||| || |||||| || || |||||||||||||||||| || || ||||| || Sbjct 8907 ATAACACCAGCTTTTTGGTAGTCTGAAACTCTTTTTTCAAAGAAATTGGTCTTACCAGCC 8966 Query 13961 AGTGATATATTTTCCATAAAATCAAATGGATTTGTTGACATAA-ACACTTTATCACAACC 14019 | || || |||||||| |||||||||||||| || |||| | ||||| | ||| Sbjct 8967 AAAGAAATGTTTTCCATGAAATCAAATGGATTAGTA-ACATTGTATACTTTCTTGTTACC 9025 Query 14020 TAGTTCTAATAGTAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAATT 14079 || | || | |||||||| || | ||| ||||| |||||| |||| || | ||| || Sbjct 9026 TAAGGCCAACAACAATCTATCAGCGACGAATTCAATGTATTGACACATCAAGTTACAGTT 9085 Query 14080 CATACCTATTAGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGC 14139 |||||| | | || |||| || ||| || | ||||| || | | ||||| Sbjct 9086 CATACCCAACAAGGACACTGGAAGAGCATCGGTAAAGTACTCTTTCTCAACATCAACAGC 9145 Query 14140 CTCGTTTATAATAATCGTAATAATTTCATTAGAAGGAGGATATTTTAGATGTTTAAAAAT 14199 || | ||||| | || ||| || ||| || | || | ||| ||| | Sbjct 9146 TTCAGTAATAATTTTTTCAACAATCTCTGGAGATGGTCTGTTTTGCAAATGAGCAAACAA 9205 Query 14200 TAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGT 14259 |||||| ||||| ||| || | || |||||||| | ||| | |||||||| || || Sbjct 9206 TAAACAAGCAAAGTCAGTGTGTAAACCTTCATCTCTGCAAATCAACTCGTTTGAGAAAGT 9265 Query 14260 TAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAA 14319 || |||||||| || |||| ||||| ||||| || || | ||| ||||| || ||| Sbjct 9266 CAACCCTGGCATTAAACCTCTCTTTTTCAACCAGAAGATAGAAGCAAATGAACCACTAAA 9325 Query 14320 GAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGT- 14378 ||| || || |||||||||||||| || | ||||| ||| ||| || | |||| | | Sbjct 9326 GAAAATACCTTCAACTGCAGCAAAGGCAACTAATCTTTCACCATACAAGGCTTCATCATC 9385 Query 14379 TCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAG 14438 | || |||||||| ||||||| |||| ||| |||| |||| | || | |||| | Sbjct 9386 TTGA-ATCCATTTGATAGCCCAGTCAGCTTTCTTTTGAATACATGGAATATTGGCAATGG 9444 Query 14439 CATTAAATAAATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTAT 14498 |||||||||| | || |||| || | | ||||| || ||||| | ||| | Sbjct 9445 CATTAAATAAGTAATCGGCTTCTTGAGGATCTTTTATGTAAGTTTCAATTAATAAAGAGT 9504 Query 14499 ACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTG 14558 | |||| || || ||||||||||| || || ||||| || || || | ||||| | Sbjct 9505 AGGTTTCTGAATGAATGTTTTCCATCATGATTTGGAAACCGTAGAATGATTTGGCTTCGG 9564 Query 14559 ACCATTGTACCTCTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAG 14618 ||| || || | | || |||| || |||||| ||| ||||||||| || Sbjct 9565 GAAGTTGAACTTCAGTCGAGAAGTTTTCAATTAAGTTTTCACCAACAATACCATCAGAAG 9624 Query 14619 CTGCAAAAAATGCCAATATGTTTTTAATAAAGTA---TTGCTCTTCATTGCTGAGTTTTT 14675 | || ||||||||||||| | | ||| || || | |||||| || | Sbjct 9625 CAGCGAAAAATGCCAATACTCTAGAGACAAAATATCTTTCATTTTCATTCAATTTGTTAT 9684 Query 14676 TCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCAACAG 14735 |||| || | ||||| ||| | ||| | ||| || | ||||| ||| ||| ||| Sbjct 9685 TCCAGTCATCCAAATCTTTACTCAAATCGATTTCTTCGGCGGTCCAGAAAGAAGCTTCAG 9744 Query 14736 CTTTTTTATA 14745 |||| ||||| Sbjct 9745 CTTTCTTATA 9754 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482340909189040