Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20dubliniensis_20[genbank_20GCA_5F000647555.1_202014-04-23] 778 sequences; 14,044,856 total letters Query= NC_003038.1 Length=212482 Score E Sequences producing significant alignments: (Bits) Value seq78 131 2e-25 >seq78 Length=41181 Score = 131 bits (144), Expect = 2e-25 Identities = 348/524 (66%), Gaps = 26/524 (5%) Strand=Plus/Plus Query 104103 TAATAATGAAGAAAAACAATATTTAAATTTATTAGAAAAAGTTCTTTTTCAAGGCGAAGA 104162 ||| | || |||| || |||| | |||||| ||||| || || | |||| ||| | Sbjct 31211 TAACATTGCAGAACAAGCATATCTTGATTTATGTAAAAAAATTATTGATGAAGGTGAACA 31270 Query 104163 TCGTGACGATAGAACAGGAATTGGAACTAAAAATGTATTTGG---AGAACAATTAAAATT 104219 |||| |||||||| || | || || ||| | |||| | ||| |||| ||| Sbjct 31271 TCGTCCTGATAGAACTGGTACAGGTACAAAATCACTCTTTGCTCCACCACAGTTAAGATT 31330 Query 104220 TAATTTAAGAAC--AT-CTTTTCCGTTACTAACTACaaaaaaaGTTTTTTGGAAAGGAGT 104276 | ||||| || || | ||||| ||| |||| || ||||| ||||||| ||||| | Sbjct 31331 TGATTTATCAAATGATACCTTTCCTTTATTAACCACTAAAAAGGTTTTTTCAAAAGGGAT 31390 Query 104277 TGTAGAAGAACTCTTATGGTTTATTAGCGGGAGTACAGATGTTTCTGTATTAAATCAAAA 104336 | | | ||| | ||||||||| || ||| ||| |||| | |||||| |||| Sbjct 31391 TATTCATGAATTATTATGGTTTGTTGCTGGGTCTACTGATGCTAAAATATTAAGCGAAAA 31450 Query 104337 AGGAGTTAAAATTTGGAATAAAAATGCAGAATCGT-----TTTATACACAACAAAAT--- 104388 ||||| ||||| ||| | |||| | |||| |||| ||| | | || Sbjct 31451 GGGAGTGAAAATCTGGGAAGGCAATGGATC-TCGTGAGTTTTTAGACAAATTAGGATTGA 31509 Query 104389 --CTTTTTaaaaaaaaTGATTTAGGACCTATTTATGGTTTTCAGTGGAGACATTATGGTG 104446 | | | || ||||| ||||| |||||||||| || |||||||||| ||||| Sbjct 31510 CTCATCGTCGTGAAGGGGATTTGGGACCAGTTTATGGTTTCCAATGGAGACATTTTGGTG 31569 Query 104447 AAAATTATATTGGGTGCGATAATAAATATGGTGGTATAG------ATCAACTCAAAAATA 104500 | | |||| | || ||| | | ||| |||| || |||| | || || Sbjct 31570 CAGAATATAAAGATTGTGATTCTGATTATAGTGGCCAAGGATTTGATCAGTTACAAGATG 31629 Query 104501 TTATTACAACAATTCAAAATGAA-CCTTGGGATAGAAGAATGATATTATTAGCTTGGAAC 104559 |||||| || |||| |||| || |||| ||||||||||| || | | |||||||| Sbjct 31630 TTATTAAAA-AATTGAAAACAAATCCTTATGATAGAAGAATTATCATGTCTGCTTGGAAT 31688 Query 104560 CCAAAGGATAATTCTAAAATGGCACTTCCTCCTTGTCATTGTAT 104603 ||| ||| | ||||||||||| | ||||| ||||| ||||| Sbjct 31689 CCACCAGATTTTGCTAAAATGGCATTACCTCCATGTCA-TGTAT 31731 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 679807788804960