Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20dubliniensis_20[genbank_20GCA_5F000647555.1_202014-04-23]
778 sequences; 14,044,856 total letters
Query= NC_003038.1
Length=212482
Score E
Sequences producing significant alignments: (Bits) Value
seq78 131 2e-25
>seq78
Length=41181
Score = 131 bits (144), Expect = 2e-25
Identities = 348/524 (66%), Gaps = 26/524 (5%)
Strand=Plus/Plus
Query 104103 TAATAATGAAGAAAAACAATATTTAAATTTATTAGAAAAAGTTCTTTTTCAAGGCGAAGA 104162
||| | || |||| || |||| | |||||| ||||| || || | |||| ||| |
Sbjct 31211 TAACATTGCAGAACAAGCATATCTTGATTTATGTAAAAAAATTATTGATGAAGGTGAACA 31270
Query 104163 TCGTGACGATAGAACAGGAATTGGAACTAAAAATGTATTTGG---AGAACAATTAAAATT 104219
|||| |||||||| || | || || ||| | |||| | ||| |||| |||
Sbjct 31271 TCGTCCTGATAGAACTGGTACAGGTACAAAATCACTCTTTGCTCCACCACAGTTAAGATT 31330
Query 104220 TAATTTAAGAAC--AT-CTTTTCCGTTACTAACTACaaaaaaaGTTTTTTGGAAAGGAGT 104276
| ||||| || || | ||||| ||| |||| || ||||| ||||||| ||||| |
Sbjct 31331 TGATTTATCAAATGATACCTTTCCTTTATTAACCACTAAAAAGGTTTTTTCAAAAGGGAT 31390
Query 104277 TGTAGAAGAACTCTTATGGTTTATTAGCGGGAGTACAGATGTTTCTGTATTAAATCAAAA 104336
| | | ||| | ||||||||| || ||| ||| |||| | |||||| ||||
Sbjct 31391 TATTCATGAATTATTATGGTTTGTTGCTGGGTCTACTGATGCTAAAATATTAAGCGAAAA 31450
Query 104337 AGGAGTTAAAATTTGGAATAAAAATGCAGAATCGT-----TTTATACACAACAAAAT--- 104388
||||| ||||| ||| | |||| | |||| |||| ||| | | ||
Sbjct 31451 GGGAGTGAAAATCTGGGAAGGCAATGGATC-TCGTGAGTTTTTAGACAAATTAGGATTGA 31509
Query 104389 --CTTTTTaaaaaaaaTGATTTAGGACCTATTTATGGTTTTCAGTGGAGACATTATGGTG 104446
| | | || ||||| ||||| |||||||||| || |||||||||| |||||
Sbjct 31510 CTCATCGTCGTGAAGGGGATTTGGGACCAGTTTATGGTTTCCAATGGAGACATTTTGGTG 31569
Query 104447 AAAATTATATTGGGTGCGATAATAAATATGGTGGTATAG------ATCAACTCAAAAATA 104500
| | |||| | || ||| | | ||| |||| || |||| | || ||
Sbjct 31570 CAGAATATAAAGATTGTGATTCTGATTATAGTGGCCAAGGATTTGATCAGTTACAAGATG 31629
Query 104501 TTATTACAACAATTCAAAATGAA-CCTTGGGATAGAAGAATGATATTATTAGCTTGGAAC 104559
|||||| || |||| |||| || |||| ||||||||||| || | | ||||||||
Sbjct 31630 TTATTAAAA-AATTGAAAACAAATCCTTATGATAGAAGAATTATCATGTCTGCTTGGAAT 31688
Query 104560 CCAAAGGATAATTCTAAAATGGCACTTCCTCCTTGTCATTGTAT 104603
||| ||| | ||||||||||| | ||||| ||||| |||||
Sbjct 31689 CCACCAGATTTTGCTAAAATGGCATTACCTCCATGTCA-TGTAT 31731
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 679807788804960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |