Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20dubliniensis_20[genbank_20GCA_5F000647555.1_202014-04-23] 778 sequences; 14,044,856 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq241 129 4e-25 >seq241 Length=19529 Score = 129 bits (142), Expect = 4e-25 Identities = 281/416 (68%), Gaps = 10/416 (2%) Strand=Plus/Minus Query 22750 GCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGCTG 22809 |||||||| || |||||||| | | ||| ||| |||||||| | || |||||| || Sbjct 9352 GCCTTTGCTGCAGTTGAAGGTATTTTCTTTAGTGGTTCATTTGCTTCTATCTTCTGGTTG 9293 Query 22810 AAGAA---ACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGAC 22866 || || | ||| | |||||||||||| | || || |||||||||||| || | || Sbjct 9292 AAAAAGAGAGGTT---TAATGCCAGGGTTGACTTTCTCAAACGAGTTGATTTGCAGAGAT 9236 Query 22867 GAAGGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCAAATGGCAAACAAACCGTGT 22926 |||||| ||||| ||||||||||||| | ||||| || || ||||| ||| | | Sbjct 9235 GAAGGTTTACACACTGACTTTGCTTGTTTATTGTTTGCTCATTTGCAAAACAGACCATCT 9176 Query 22927 CAGGACGATGCACATCAAATCATATCTGATGCCGTTGACATTGAGACGGCTTTCTTCCAA 22986 | || || | |||| || |||| || ||||| |||||| | | ||| Sbjct 9175 CCAGAGATTGTTGAAAAAATTATTACTGAAGCTGTTGATGTTGAGAAAGAGTACTTTACC 9116 Query 22987 GAGGCACTAAAGACACCCCTACTTGGTATGAATAGTGACAGTATGAGACTGTACATACAG 23046 || || || || | | |||||||| || || ||| | | ||||| | Sbjct 9115 GATGCTCTTCCAGTGTCCTTGTTGGGTATGAACTGTAACTTGATGTGTCAATACATTGAA 9056 Query 23047 TTTGTTGCAGATCGCCTGCTCGATGCCCTGGGTTATGCAAAGATGTAT--AACGTTGCCA 23104 || || || ||| | || | | || ||| | || ||| | |||| || ||| | | Sbjct 9055 TTCGTCGCTGATAGATTG-TTGTTGGCCTTAGGTA-ACAAGAAAGTATACAATGTTACTA 8998 Query 23105 ATCCATTTGATTTCATGGATAACATTAGCATTGAAGGTAAAACAAACTTCTTTGAA 23160 ||||||||||||||||||| |||||| | | ||||| || || ||||||||| Sbjct 8997 ATCCATTTGATTTCATGGAAAACATTTCTTTGGCTGGTAAGACCAATTTCTTTGAA 8942 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356230222237534