Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20dubliniensis_20[genbank_20GCA_5F000647555.1_202014-04-23]
778 sequences; 14,044,856 total letters
Query= NC_003494.1
Length=111362
Score E
Sequences producing significant alignments: (Bits) Value
seq241 129 4e-25
>seq241
Length=19529
Score = 129 bits (142), Expect = 4e-25
Identities = 281/416 (68%), Gaps = 10/416 (2%)
Strand=Plus/Minus
Query 22750 GCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGCTG 22809
|||||||| || |||||||| | | ||| ||| |||||||| | || |||||| ||
Sbjct 9352 GCCTTTGCTGCAGTTGAAGGTATTTTCTTTAGTGGTTCATTTGCTTCTATCTTCTGGTTG 9293
Query 22810 AAGAA---ACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGAC 22866
|| || | ||| | |||||||||||| | || || |||||||||||| || | ||
Sbjct 9292 AAAAAGAGAGGTT---TAATGCCAGGGTTGACTTTCTCAAACGAGTTGATTTGCAGAGAT 9236
Query 22867 GAAGGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCAAATGGCAAACAAACCGTGT 22926
|||||| ||||| ||||||||||||| | ||||| || || ||||| ||| | |
Sbjct 9235 GAAGGTTTACACACTGACTTTGCTTGTTTATTGTTTGCTCATTTGCAAAACAGACCATCT 9176
Query 22927 CAGGACGATGCACATCAAATCATATCTGATGCCGTTGACATTGAGACGGCTTTCTTCCAA 22986
| || || | |||| || |||| || ||||| |||||| | | |||
Sbjct 9175 CCAGAGATTGTTGAAAAAATTATTACTGAAGCTGTTGATGTTGAGAAAGAGTACTTTACC 9116
Query 22987 GAGGCACTAAAGACACCCCTACTTGGTATGAATAGTGACAGTATGAGACTGTACATACAG 23046
|| || || || | | |||||||| || || ||| | | ||||| |
Sbjct 9115 GATGCTCTTCCAGTGTCCTTGTTGGGTATGAACTGTAACTTGATGTGTCAATACATTGAA 9056
Query 23047 TTTGTTGCAGATCGCCTGCTCGATGCCCTGGGTTATGCAAAGATGTAT--AACGTTGCCA 23104
|| || || ||| | || | | || ||| | || ||| | |||| || ||| | |
Sbjct 9055 TTCGTCGCTGATAGATTG-TTGTTGGCCTTAGGTA-ACAAGAAAGTATACAATGTTACTA 8998
Query 23105 ATCCATTTGATTTCATGGATAACATTAGCATTGAAGGTAAAACAAACTTCTTTGAA 23160
||||||||||||||||||| |||||| | | ||||| || || |||||||||
Sbjct 8997 ATCCATTTGATTTCATGGAAAACATTTCTTTGGCTGGTAAGACCAATTTCTTTGAA 8942
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 356230222237534
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |