Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20dubliniensis_20[genbank_20GCA_5F000647555.1_202014-04-23]
778 sequences; 14,044,856 total letters
Query= NC_004003.1
Length=149599
Score E
Sequences producing significant alignments: (Bits) Value
seq22 275 6e-69
seq241 269 3e-67
>seq22
Length=82586
Score = 275 bits (304), Expect = 6e-69
Identities = 502/727 (69%), Gaps = 10/727 (1%)
Strand=Plus/Minus
Query 13369 TTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCCAGTGATATATTT 13428
||||| || ||| |||||| |||||||| || ||||||||||| ||| ||| ||||||
Sbjct 9502 TTTTGGTAATCAGAAACTCTCTTTTCAAAGAAATTAGTTTTACCAGCCAATGAGATATTT 9443
Query 13429 TCCATAAAATCGAATGGATTTGTTGACATA--AACACTTTATCACAACCTAGTTCTAATA 13486
||||||||||| |||||||| || |||| || ||||| | | || | | | ||
Sbjct 9442 TCCATAAAATCAAATGGATTAGTA-ACATTGTAATACTTTTT-ATTTCCAAAGGCCACTA 9385
Query 13487 ATAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTA 13546
|||||| |||||||| ||| |||| ||| || |||| || ||||||||||| || | ||
Sbjct 9384 ATAATCGATCAGCAACAAATTCAACATACTGGCACATCAAGTCACAATTCATTCCCAATA 9325
Query 13547 GTTTTACAGGAATTATATTAGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAA 13606
||| |||| || | ||| ||| ||| || |||| |||||||||| | || |
Sbjct 9324 AAGATACTGGAAGCGCATCGCTGAAATATTTTTTCTCAATAGTCACAGCCTCGGTAATGA 9265
Query 13607 TAATCTTAATAATGTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAA 13666
| ||| ||| || || |||||| || |||| || || | ||||| |||
Sbjct 9264 TTTTCTCAATGATTTCTGGAGAAGGTTTATTCTTTAAATACGAGAATAACAAACAGGCAT 9205
Query 13667 AATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCA 13726
|||| |||| || || |||| | ||| | ||| || |||||||| ||||||||||
Sbjct 9204 AATCCGTGTGAATCCCTTCGTCTCGGCAAATCAATTCATTCGAAAATGTCAATCCTGGCA 9145
Query 13727 TCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCT 13786
|||| || | ||| |||||||| || ||||| || || || || || ||||| || |
Sbjct 9144 TCAACCCCCTTTTCTTTAACCAGAAAATTGCTGCAAACGAACCACTGAAAAATATACCTT 9085
Query 13787 CAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGT-TTGATATCCAT 13845
|||| ||||||||||| | | || || || || | || | | || |||| |||||
Sbjct 9084 CAACGGCAGCAAACGCAACCAATCTCTCAGCATACAAAGCATCCTCGTCTTGA-ATCCAC 9026
Query 13846 TTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGATTGCATTGAATAAA 13905
| | ||||| || | ||||| | | || || || |||| || ||||| || |||
Sbjct 9025 CTGATGGCCCAATCGGCTTTTTCTCTGATGAATGGGATATTTTCAATAGCATTAAACAAA 8966
Query 13906 TGTTC--CTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAG 13963
|| ||||| | || |||||| |||||| || || | || ||| | || |
Sbjct 8965 AAGTCCGCTTCTTCTGGGTCCTTGAA--GTATGTTTCGATTAACAACGAATAAGTCTCTG 8908
Query 13964 AGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTA 14023
| || |||||||| || |||||||| || | | ||| |||| |||||
Sbjct 8907 AATGGATGTTTTCCATCATGATCTGAAACTTGTATACCAGTTGAGCCTCTGGTATTTGTA 8848
Query 14024 CCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCACTAGCTGCAAAAA 14083
| || | | || |||| ||||||| ||||| ||||||||||| || ||||| |
Sbjct 8847 CTTCAGCACAGAAATTTTCCACCAAGTTCTCATTGACAATACCATCCGAGGCAGCAAAGA 8788
Query 14084 ATGCCAA 14090
|||||||
Sbjct 8787 ATGCCAA 8781
>seq241
Length=19529
Score = 269 bits (298), Expect = 3e-67
Identities = 576/853 (68%), Gaps = 13/853 (2%)
Strand=Plus/Plus
Query 13357 ATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCC 13416
||||| || |||||| || || ||||||||||||||| || || || ||||| ||
Sbjct 8907 ATAACACCAGCTTTTTGGTAGTCTGAAACTCTTTTTTCAAAGAAATTGGTCTTACCAGCC 8966
Query 13417 AGTGATATATTTTCCATAAAATCGAATGGATTTGTTGACATAA-ACACTTTATCACAACC 13475
| || || |||||||| ||||| |||||||| || |||| | ||||| | |||
Sbjct 8967 AAAGAAATGTTTTCCATGAAATCAAATGGATTAGTA-ACATTGTATACTTTCTTGTTACC 9025
Query 13476 TAGTTCTAATAATAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATT 13535
|| | || || ||||||||||| | || ||||| |||||| |||| || | ||| ||
Sbjct 9026 TAAGGCCAACAACAATCTATCAGCGACGAATTCAATGTATTGACACATCAAGTTACAGTT 9085
Query 13536 CATACCTATTAGTTTTACAGGAATTATATTAGTTAAAAATTCTTTTTCTATAGACACAGC 13595
|||||| | | || |||| || || || | ||||| || | | |||||
Sbjct 9086 CATACCCAACAAGGACACTGGAAGAGCATCGGTAAAGTACTCTTTCTCAACATCAACAGC 9145
Query 13596 CTCGTTTATAATAATCTTAATAATGTCATTAGAAGGAGGATATTTTAGATGTTTAAAAAT 13655
|| | ||||| | | || ||| || ||| || | || | ||| ||| |
Sbjct 9146 TTCAGTAATAATTTTTTCAACAATCTCTGGAGATGGTCTGTTTTGCAAATGAGCAAACAA 9205
Query 13656 TAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGT 13715
|||||| ||||| ||| || | || |||||||| | ||| | |||||||| || ||
Sbjct 9206 TAAACAAGCAAAGTCAGTGTGTAAACCTTCATCTCTGCAAATCAACTCGTTTGAGAAAGT 9265
Query 13716 TAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAA 13775
|| |||||||| || |||| ||||| ||||| || || | ||| ||||| || |||
Sbjct 9266 CAACCCTGGCATTAAACCTCTCTTTTTCAACCAGAAGATAGAAGCAAATGAACCACTAAA 9325
Query 13776 GAATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGT- 13834
||| || || |||||||||||||| || | || || ||| ||| || | |||| | |
Sbjct 9326 GAAAATACCTTCAACTGCAGCAAAGGCAACTAATCTTTCACCATACAAGGCTTCATCATC 9385
Query 13835 TTGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGATTG 13894
|||| |||||||| ||||||| |||| ||| |||| |||| | || | | || |
Sbjct 9386 TTGA-ATCCATTTGATAGCCCAGTCAGCTTTCTTTTGAATACATGGAATATTGGCAATGG 9444
Query 13895 CATTGAATAAATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTAT 13954
|||| ||||| | || |||| || | | ||||| || ||||| | ||| |
Sbjct 9445 CATTAAATAAGTAATCGGCTTCTTGAGGATCTTTTATGTAAGTTTCAATTAATAAAGAGT 9504
Query 13955 ACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTG 14014
| |||| || || |||||||| || || || ||||| || || || | ||||| |
Sbjct 9505 AGGTTTCTGAATGAATGTTTTCCATCATGATTTGGAAACCGTAGAATGATTTGGCTTCGG 9564
Query 14015 ACCATTGTACCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCACTAG 14074
||| || || | | || |||| ||||||||| ||||||||||||| ||
Sbjct 9565 GAAGTTGAACTTCAGTCGAGAAGTTTTCAATTAAGTTTTCACCAACAATACCATCAGAAG 9624
Query 14075 CTGCAAAAAATGCCAATATGTTTTTAATAAAGTA---TTGCTCTTCATT---GTTGAGTT 14128
| || ||||||||||||| | | ||| || || | |||||| ||| |
Sbjct 9625 CAGCGAAAAATGCCAATACTCTAGAGACAAAATATCTTTCATTTTCATTCAATTTG---T 9681
Query 14129 TTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGA 14188
| ||||| || | ||||| ||| | ||| | ||| || | ||||| ||| |||
Sbjct 9682 TATTCCAGTCATCCAAATCTTTACTCAAATCGATTTCTTCGGCGGTCCAGAAAGAAGCTT 9741
Query 14189 CAGCTTTTTTATA 14201
||||||| |||||
Sbjct 9742 CAGCTTTCTTATA 9754
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478584145723920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |