Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20dubliniensis_20[genbank_20GCA_5F000647555.1_202014-04-23] 778 sequences; 14,044,856 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq221 89.7 4e-13 >seq221 Length=21533 Score = 89.7 bits (98), Expect = 4e-13 Identities = 153/220 (70%), Gaps = 8/220 (4%) Strand=Plus/Minus Query 42894 TCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTC 42953 ||| || ||||| || | ||| |||||||| | ||||| || || || || | | Sbjct 10181 TCTCAAGACCAAGTGCAAAGTAGATTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTACC 10122 Query 42954 GTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTT 43013 ||| ||||||||||| || |||||||| |||| ||||| || | || | ||||||||| Sbjct 10121 GTCTTCCAATTGTTTACCAGCAAAAATTAATCTTTGTTGGTCTGGTGGAATACCTTCTTT 10062 Query 43014 TTCGCTGA----TCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCG 43069 || ||| | || ||||| || ||| ||||| || || || |||| | Sbjct 10061 GTC-TTGAATTTTGGAC---TTGACATTGTCAATAGTGTCAGAAGATTCAACTTCTAAAG 10006 Query 43070 TTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 | || ||||| || |||| || || || ||||||||||| Sbjct 10005 TAATGGTTTTACCAGTTAAGGTCTTGACGAAAATTTGCAT 9966 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381365983901124