Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20dubliniensis_20[genbank_20GCA_5F000647555.1_202014-04-23]
778 sequences; 14,044,856 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq22 122 2e-22
seq241 116 1e-20
>seq22
Length=82586
Score = 122 bits (134), Expect = 2e-22
Identities = 307/460 (67%), Gaps = 15/460 (3%)
Strand=Plus/Plus
Query 22499 TTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTTTGGC 22558
|||| ||||||| |||||||| || || || ||| | ||| ||||| || |||
Sbjct 9067 TTGCGTTTGCTGCCGTTGAAGGTATATTTTTCAGTGGTTCGTTTGCAGCAATTTTCTGGT 9126
Query 22559 TaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAGATG 22618
|||| ||| | | | ||||| || | || ||||| ||||| || ||| ||||||| |
Sbjct 9127 TAAAGAAAAGGGGGTTGATGCCAGGATTGACATTTTCGAATGAATTGATTTGCCGAGACG 9186
Query 22619 AGGGTCTTCATACCGATTTTGCGTGTATGCTATA-TCGGAATCATATCATTCATAAACTT 22677
| || |||| || |||| ||| ||| || ||| ||| | | | | || || |||
Sbjct 9187 AAGGGATTCACACGGATTATGCCTGTTTGTTATTCTCGTATTTAAAGAATA---AACCTT 9243
Query 22678 CCATATGAAACTGTACTTGATA---TTATTACAAATGCAGTTGAACTTGAACGTCTATTT 22734
| | |||| | |||| | | ||||| | || || |||| | | |
Sbjct 9244 CTCCA-GAAA---TCATTGAGAAAATCATTACCGAGGCTGTGACTATTGA--GAAAAAAT 9297
Query 22735 ATTT--GCGAGGCGTTACCAGTAAGTCTCATTGGTATCAATGCCGAATCAATGAGTACAT 22792
|||| |||| ||| | |||||| | | | || || ||| || | ||| | |
Sbjct 9298 ATTTCAGCGATGCGCTTCCAGTATCTTTATTGGGAATGAATTGTGACTTGATGTGCCAGT 9357
Query 22793 ATATTAAATTTGTTGCAGATCGTCTATTAATTTCACTCGGTTATGCAAAGCATTATAACG 22852
|| || |||||||||| ||||| ||||| | | | || || |||| |||| || |
Sbjct 9358 ATGTTGAATTTGTTGCTGATCGATTATTAGTGGCCTTTGGAAATAAAAAGTATTACAATG 9417
Query 22853 TCGTTAATCCATTTGAATGGATGGAACTTATTTCACTTGAAGGAAAGACCAATTTCTTCG 22912
| |||||||||||| | |||||| ||| ||| | | || || || |||||||| |
Sbjct 9418 TTACTAATCCATTTGATTTTATGGAAAATATCTCATTGGCTGGTAAAACTAATTTCTTTG 9477
Query 22913 AAAAAAGAGTTGGTGAATACCAAAAAGCAGGTGTTATGGA 22952
|||| |||||| ||| |||||||| || ||||| |||||
Sbjct 9478 AAAAGAGAGTTTCTGATTACCAAAAGGCCGGTGTAATGGA 9517
>seq241
Length=19529
Score = 116 bits (128), Expect = 1e-20
Identities = 481/745 (65%), Gaps = 24/745 (3%)
Strand=Plus/Minus
Query 22219 GCATTCTTTGCTACCGCAGACGGTATAGTTTTTGAGAATCTAGTGACTAATTTTGCATCT 22278
||||| || ||| | | || ||||| ||| ||| || || | || || | ||
Sbjct 9637 GCATTTTTCGCTGCTTCTGATGGTATTGTTGGTGAAAACTTAATTGAAAACTTCTCGACT 9578
Query 22279 GAAATTCAATACCCAGAGGCCAGATGTTTCTATGGTGTGCAAATGATGATTGAAAATGTT 22338
||| ||||| || || |||| || ||||| ||| | ||||| ||||| ||||| ||
Sbjct 9577 GAAGTTCAACTTCCCGAAGCCAAATCATTCTACGGTTTCCAAATCATGATGGAAAACATT 9518
Query 22339 CACGCGGAAACATATTCTATGATGCTACAGTCACTCGTAGAAGATAAAGACGAACAACGA 22398
|| | ||||| || ||| | | | | | | || ||||| | ||| |||
Sbjct 9517 CATTCAGAAACCTACTCTTTATTAATTGAAACTTACATAAAAGATCCTCAAGAAGC-CGA 9459
Query 22399 A-ACTTATTCCGCGCGATTCGCACCATTCAATCAATTAAGAATAAGGCAGATTGGGCGCT 22457
||||||| || ||| || |||| || ||| | || || || || ||||| |
Sbjct 9458 TTACTTATTTAATGCCATTGCCAATATTCCATGTATTCAAAAGAAAGCTGACTGGGCTAT 9399
Query 22458 GAAATGGATG-AACA--ATGAACGTTCATTCGCGGAACGTCTTATTGCATTTGCTGTGGT 22514
|||||||| || | ||||| | | | ||| | | |||| ||||||| ||
Sbjct 9398 CAAATGGATTCAAGATGATGAAGCCTTGTATGGTGAAAGATTAGTTGCCTTTGCTGCAGT 9339
Query 22515 TGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTTTGGCTaaaaaaaCGTGCAAT 22574
|||||| ||||||||| ||| ||||| | | ||||| ||| | ||||| | | |
Sbjct 9338 TGAAGGTATTTTCTTTAGTGGTTCATTTGCTTCTATCTTCTGGTTGAAAAAGAGAGGTTT 9279
Query 22575 TATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAGATGAGGGTCTTCATACCGA 22634
||||| || | || || ||||| ||||| ||| || ||||||| ||| | || || ||
Sbjct 9278 AATGCCAGGGTTGACTTTCTCAAACGAGTTGATTTGCAGAGATGAAGGTTTACACACTGA 9219
Query 22635 TTTTGCGTGTATGCTATATCGGAATCATATCATTCATAAACTTCCATAT---GAAACTGT 22691
||||| ||| | | | | |||| | || || |||| | || | |||
Sbjct 9218 CTTTGCTTGTTTATTGTTTGC---TCATTTG---CAAAACAGACCATCTCCAGAGATTGT 9165
Query 22692 ACTTGATATTATTACAAATGCAGTTGAACTTGA--ACGTCTATTTATTTGCGAGGCGTTA 22749
| |||||||| | || ||||| |||| | | || || | ||| || |
Sbjct 9164 TGAAAAAATTATTACTGAAGCTGTTGATGTTGAGAAAGAGTACTT--TACCGATGCTCTT 9107
Query 22750 CCAGTAAGTC--TCATTGGTATCAATGCCGAATCAATGAGTACATATATTAAATTTGTTG 22807
||||| ||| | | ||||| || | | ||| || ||| ||| |||| || |
Sbjct 9106 CCAGT--GTCCTTGTTGGGTATGAACTGTAACTTGATGTGTCAATACATTGAATTCGTCG 9049
Query 22808 CAGATCGTCTATTAATTTCACTCGGTTATGC-AAAGCATTATAACGTCGTTAATCCATTT 22866
| ||| | | || | | | ||| | |||| || | || || ||||||||||
Sbjct 9048 CTGATAGATTGTTGTTGGCCTTAGGTAACAAGAAAGTAT-ACAATGTTACTAATCCATTT 8990
Query 22867 GAATGGATGGAACTTATTTCACTTGAAGGAAAGACCAATTTCTTCGAAAAAAGAGTTGGT 22926
|| | |||||| ||||| | | || |||||||||||||| ||||||||||||
Sbjct 8989 GATTTCATGGAAAACATTTCTTTGGCTGGTAAGACCAATTTCTTTGAAAAAAGAGTTTCA 8930
Query 22927 GAATACCAAAAAGCAGGTGTTATGG 22951
|| ||||||||||| ||||||||||
Sbjct 8929 GACTACCAAAAAGCTGGTGTTATGG 8905
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303340608008396
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |