Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20dubliniensis_20[genbank_20GCA_5F000647555.1_202014-04-23]
778 sequences; 14,044,856 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq241 262 4e-65
seq22 154 2e-32
>seq241
Length=19529
Score = 262 bits (290), Expect = 4e-65
Identities = 611/910 (67%), Gaps = 35/910 (4%)
Strand=Plus/Plus
Query 92790 CATAACACCACATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTC 92849
|||||||||| ||||||||| || |||| |||||||||||||||| ||||| || |
Sbjct 8906 CATAACACCAGCTTTTTGGTAGTCTGAAACTCTTTTTTCAAAGAAATTGGTCTTACCAGC 8965
Query 92850 CAAAGATATCGAATTCACT---AGTGATTGGATTCTTGGCGTTATAATACTTT----TCA 92902
|||||| || | ||| | | | |||||| | | || || |||||| | |
Sbjct 8966 CAAAGAAAT-GTTTTCCATGAAATCAAATGGATTAGTAACATTGTA-TACTTTCTTGTTA 9023
Query 92903 CCGATCAACTCGTACAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCA 92962
|| | | | |||| ||||||||||| || ||||| ||||| ||| ||||||| | |
Sbjct 9024 CCTA---AGGCCAACAACAATCTATCAGCGACGAATTCAATGTATTGACACATCAAGTTA 9080
Query 92963 CAATTCATTCCTAGAA--GACGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTA 93020
|| ||||| || | | ||| || || ||||| ||||| ||| | |||||||| |
Sbjct 9081 CAGTTCATACCCAACAAGGAC--ACTGGAAGAGCATCGGTAAAGTACTCTTTCTCAACAT 9138
Query 93021 CAACGGCTTCTTTCAAGATTTCTATTACTCTACTATTTGG---TGGTTTTTGTACGACAT 93077
|||| ||||| | | |||| | || | | | ||| |||| | | | | ||
Sbjct 9139 CAACAGCTTCAGTAATAATTTTTTCAAC---AATCTCTGGAGATGGTCTGTTTTGCAAAT 9195
Query 93078 AATTGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCAT 93137
| ||| ||| || |||||||| || ||||||||||| |||| | |||||||| |
Sbjct 9196 GAGCAAACAATAAACAAGCAAAGTCAGTGTGTAAACCTTCATCTCTGCAAATCAACTCGT 9255
Query 93138 TGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAAC 93197
| ||| || || ||||| | | |||| || || | ||| || || ||||||||
Sbjct 9256 TTGAGAAAGTCAACCCTGGCATTAAACCTCTCTTTTTCAACCAGAAGATAGAAGCAAATG 9315
Query 93198 TACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTG 93257
|||| ||| || |||||||| || || ||||| || || | | ||| || | |
Sbjct 9316 AACCACTAAAGAAAATACCTTCAACTGCAGCAAAGGCAACTAATCTTTCACCATACAAGG 9375
Query 93258 CGGAATTACTGCTG-ATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGT 93316
| || | | || |||||||| | |||||| || ||||| || | |||||| || |
Sbjct 9376 CTTCATCA-TCTTGAATCCATTTGATAGCCCAGTCAGCTTTCTTTTGAATACATGGAATA 9434
Query 93317 GTTTCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATT 93376
| | || || ||||||| |||||| || | | |||| |||||| || || |||
Sbjct 9435 TTGGCAATGGCATTAAATAAGTAATCGGCTTCTTGAGGATCTTTTATGTAAGTTTCAATT 9494
Query 93377 AACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACAT 93436
|| | ||| || |||| ||||| | || ||||| |||||||| |||||||| ||
Sbjct 9495 AATAAAGAGTAGGTTTCTGAATGAATGTTTTCCATCATGATTTGGAAACCGTAGAATGAT 9554
Query 93437 CTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATA 93496
| ||||| | | || ||||| || || | || | | |||||| || |||
Sbjct 9555 TTGGCTTCGGGAAGTTGAACTTCAGTCGAGAAGTTTTCAATTAAGTTTTCACCAACAATA 9614
Query 93497 CCATCGGATGCTGCaaaaaaaGCCAATATATGCTTT----ATAAAATGTTTCTCATCATC 93552
||||| || || || ||||| ||||||| || | | ||||| | | |||| ||
Sbjct 9615 CCATCAGAAGCAGCGAAAAATGCCAATA----CTCTAGAGACAAAATATCTTTCATTTTC 9670
Query 93553 TTTAA---GCTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCA 93609
|| | |||| ||| || | |||||| | ||||| ||||||| | |||||
Sbjct 9671 ATTCAATTTGTTATTCCAGTCATCCAAATCTTTACTCAAATCGATTTCTTCGGCGGTCCA 9730
Query 93610 AAACGATGCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATAT 93669
|| || ||||| ||||| || || | | ||| || || || ||| ||||| || ||
Sbjct 9731 GAAAGAAGCTTCAGCTTTCTTATAAAAGTTCCAAATTTCATGGTATCTGATTGGGAACAT 9790
Query 93670 GACAAAACGA 93679
||| |||||
Sbjct 9791 CACATAACGA 9800
>seq22
Length=82586
Score = 154 bits (170), Expect = 2e-32
Identities = 578/898 (64%), Gaps = 29/898 (3%)
Strand=Plus/Minus
Query 92790 CATAACACCACATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTC 92849
||| ||||| |||||||| || |||| | |||||||||||||| || || || |
Sbjct 9515 CATTACACCGGCCTTTTGGTAATCAGAAACTCTCTTTTCAAAGAAATTAGTTTTACCAGC 9456
Query 92850 CAA--AGATATCGAATTCACTAGTG---ATTGGATTCTTGGCGTTATAATACTTTTCACC 92904
||| |||||| ||| || | |||||| | | || |||||||||| |
Sbjct 9455 CAATGAGATATT---TTCCATAAAATCAAATGGATTAGTAACATTGTAATACTTTTTATT 9399
Query 92905 GATCAACTCGTACAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCACA 92964
|| | ||||||| |||||| |||||||| | ||||| ||||||| |||||
Sbjct 9398 TCCAAAGGCCACTAATAATCGATCAGCAACAAATTCAACATACTGGCACATCAAGTCACA 9339
Query 92965 ATTCATTCCTAGAAGACGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAAC 93024
||||||||| | | | ||| || || || ||| | || | | |||||| || ||
Sbjct 9338 ATTCATTCCCAATAAAGATACTGGAAGCGCATCGCTGAAATATTTTTTCTCAATAGTCAC 9279
Query 93025 GGCTTCTTTCAAGATTTCTATTACTCTACTATTT-----GGTGGTTTTTGTACGACATAA 93079
|| || | | ||||| ||| | |||| | ||||| | | |||
Sbjct 9278 AGCCTCGGTAATGATTTT-----CTCAATGATTTCTGGAGAAGGTTTATTCTTTAAATAC 9224
Query 93080 TTGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTG 93139
| | | || || ||| | || || || | ||||||||||| | ||||| |||||
Sbjct 9223 GAGAATAACAAACAGGCATAATCCGTGTGAATCCCTTCGTCTCGGCAAATCAATTCATTC 9164
Query 93140 CTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTA 93199
||||| || ||||| | || || | |||||| | ||| || |||| ||||| |
Sbjct 9163 GAAAATGTCAATCCTGGCATCAACCCCCTTTTCTTTAACCAGAAAATTGCTGCAAACGAA 9104
Query 93200 CCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCG 93259
||| |||||||||||||| ||||| ||||| || || | | || ||| | ||
Sbjct 9103 CCACTGAAAAATATACCTTCAACGGCAGCAAACGCAACCAATCTCTCAGCATACAAAGC- 9045
Query 93260 GAAT--TACTGCTG-ATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGT 93316
|| | | || ||||| | | |||||||||||||||| | || | || |
Sbjct 9044 --ATCCTCGTCTTGAATCCACCTGATGGCCCAATCGGCTTTTTCTCTGATGAATGGGATA 8987
Query 93317 GTTTCGATAGCGTTAAATAGGTAATCTCGC-TCGTCCGAATCTCGTATGTATGTATCGAT 93375
|||| ||||| ||||| | | || ||| || || | || | |||||| |||||
Sbjct 8986 TTTTCAATAGCATTAAACAAAAAGTC-CGCTTCTTCTGGGTCCTTGAAGTATGTTTCGAT 8928
Query 93376 TAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACA 93435
||||| ||||| | || ||||||| || ||||| || || || ||| |
Sbjct 8927 TAACAACGAATAAGTCTCTGAATGGATGTTTTCCATCATGATCTGAAACTTGTATACCAG 8868
Query 93436 TCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTAT 93495
| ||| || | || || ||||| | | || | || || | || |||||||| ||
Sbjct 8867 TTGAGCCTCTGGTATTTGTACTTCAGCACAGAAATTTTCCACCAAGTTCTCATTGACAAT 8808
Query 93496 ACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTT 93555
|||||| || || ||||| || ||||| | | || ||| | | |||| || ||
Sbjct 8807 ACCATCCGAGGCAGCAAAGAATGCCAACACTCGGGAGATGAAAAATCTTTCATTTTCGTT 8748
Query 93556 AAGCTTA---TCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAA 93612
| ||| | ||| |||| | |||||| | || | ||||| | ||||||||
Sbjct 8747 CATTTTATTGTTCCAGTCGGCCAAATCTTTACTTAAGTCAAGCTCTTCAGCTGTCCAAAA 8688
Query 93613 CGATGCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATG 93670
||| || | |||||||| | | ||||| || |||| | ||| ||| |||||
Sbjct 8687 CGAGGCCAACGACTTTTTGTAGAATTGCCATAACTCCGGATACTTAATAGGATATATG 8630
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556855384528720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |