Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20dubliniensis_20[genbank_20GCA_5F000647555.1_202014-04-23]
778 sequences; 14,044,856 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq30 123 3e-23
seq65 118 1e-21
>seq30
Length=68702
Score = 123 bits (136), Expect = 3e-23
Identities = 355/540 (66%), Gaps = 12/540 (2%)
Strand=Plus/Minus
Query 116064 CCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGG 116123
||||||||||||||| | || || | || || ||||| |||| ||||| ||||||||
Sbjct 2121 CCACATATCAAACTGTAATATCCCATTTGATGCCGGCGAGCCCTGGAATGTTTCATATGG 2062
Query 116124 GCCCTCAACCTCCGCCAATTCGGAGCTC--GCCTCGAGGGCTGCGTGATACATTGTCTCA 116181
|||||| | |||||||| | || ||||| || || || || || || || |||
Sbjct 2061 GCCCTCTTTCATTGCCAATTC--AACTGAGGCCTCAAGTGCAGCATGGTATATAGTTTCA 2004
Query 116182 AAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATA 116241
|| || || ||| | || || ||| | |||||||| | | || | | |
Sbjct 2003 AATATCTGAATATTTAATGTTTTAGCCATTGCAGAATCAAAAGGTAATCGAAGCTCAGCA 1944
Query 116242 AATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTT 116301
|| | ||| || | ||||| ||||| | ||||||| || |||||| |||| || | |
Sbjct 1943 AACAAATCTGCCAAGCCTTGTACACCCAAAGCAATTGGACGGTGTCTCTTATTTGAATAT 1884
Query 116302 CGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACA 116361
|| || | || ||||| | ||| || || | || | ||| | || |
Sbjct 1883 TCTGCCGTTTTAACAGGATATTTTGTTACATCAATCACTTTGTTCAAATTCCTTGTCAAG 1824
Query 116362 ACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAA---ACTGCGAGTCTCTTCA---TTG 116415
|| || |||| || | ||||| ||||||| | || | |||| ||
Sbjct 1823 ACTTTGGTGACAGAGTGCAATTTTTCAAAATCAAATGCAATGGCATCCTCTGTGGTTTTC 1764
Query 116416 ACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCA-GT 116474
| ||| |||| | || | ||||| | ||| ||||||| || || || | | | |
Sbjct 1763 AAATATGTAGGCAATGCAAGAGACGCTAAATTGCACACAGCAGTTTCTTC-TGGTGATGA 1705
Query 116475 GTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATT 116534
|| || | |||||| ||||||||||||| ||| || || || | ||| ||||| ||
Sbjct 1704 ATATTCAACAATTTCGCAACACAAATTTGAAGACTTTATTGTCCCGATGTTTTTTTGGTT 1645
Query 116535 TGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGA 116594
||| ||||||||||| || || ||||| |||||||| || || || || ||||| ||
Sbjct 1644 TGATTTTGTGTTACAGGCGTCTTTGTATAGCATATAAGGACCACCTGTTTCAGTTTGAGA 1585
>seq65
Length=45114
Score = 118 bits (130), Expect = 1e-21
Identities = 888/1412 (63%), Gaps = 51/1412 (4%)
Strand=Plus/Minus
Query 115903 TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 115962
|| ||||| | |||||||| || || ||||||||||||||||| ||||| | ||| ||
Sbjct 20063 TAAATGTTAGAAGTGTATGGTTCGAAACACTCATTGTTACCCAAAATTTGTGATGTAGAA 20004
Query 115963 GCTGTGGGCATGGGTGCCA-TGAGAAGGCTGTTGCGGAGACCCACCCC--CCTAATGCGT 116019
|| || ||||| || || | | | |||| ||| | | ||| | || ||| |
Sbjct 20003 GCAGTAGGCATTGGAGCAACTAATAAGGA-GTTTCTCATACCATGCTTAGCCAAATT--T 19947
Query 116020 TCCTTGAGGGCGTCCCAGTCG--TAGTTGAGCTTTGTCTCCCCCTCCCACATATCAAACT 116077
| || | | ||||| || || || || ||| | | | ||| | ||||||||
Sbjct 19946 TGTTTTAATGTATCCCAATCCCATAATTCAG--TTGGTTTTCTGTTCCATAAATCAAACT 19889
Query 116078 GGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCG 116137
| | | |||||| || || || || || | | || || || | || || | | |
Sbjct 19888 GTAATAAACCTTGAGAGGCAGGGGAGCCTGGATAAGTTTCGTAGGCACCTTCTTCTTTAG 19829
Query 116138 CCAATTC----GGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCA 116193
||||||| | |||| || | || || || || || ||||| ||||| ||
Sbjct 19828 CCAATTCAACAGAAGCT----TCAACAGCAGCATGGTAAATAGTCTCGAAAATTTGAATG 19773
Query 116194 TTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCG 116253
|| | | | |||| || | ||| ||||| | | | | ||||| |||| ||
Sbjct 19772 TTTAATTCTCTGGCTTCTTGGGAGTCAAATGGTAATCTCAATTCCATAAAGGCATCAGCC 19713
Query 116254 AGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGA-CTTTCGAGCGGTCTC 116312
| |||||| ||||| | ||||||| | ||||||||||| || |||||| || |||
Sbjct 19712 AAACCTTGAACACCCAAAGCAATTGGTCTGTGTCTCATATTTGATCTTTCG-GCT-TCTG 19655
Query 116313 CA-CGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGA 116371
| | || ||| || | || ||||| || || | || |||||| ||||| ||||
Sbjct 19654 GAACTGGGTAATGGTTGCGGTCAATAACTCTGTTCAAGTTACGGGTGACTACCTTGGTGA 19595
Query 116372 TTTCATGAAGCTTTTCGTAATCAAAACTG---CGAGTCTCTTCATTGA---CAT---ACT 116422
||||| | ||| |||||| || | ||| | | | |||| | | ||
Sbjct 19594 CATCATGTAACTT------ATCAAAGTTGTACCAAGTAT-TACTTTGATCGCTTTCAACA 19542
Query 116423 TAGGAAGG----GCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTAC 116478
| || || || || || |||| ||||| |||| | ||||| | ||| ||
Sbjct 19541 AATGATGGTAAAGCAATGGAGGCCAAGTTACAAACAGCGACTTCATCTGGAGCAGAATAT 19482
Query 116479 TCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGAC 116538
|| | |||||| ||| || || ||| ||||| | |||||||||||||| || ||
Sbjct 19481 TCAACAATTTCACAACATAAGTTGGAAGATTTAATAATACCCAAGTTCTTTTGGTTGGAT 19422
Query 116539 TTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTG 116598
|| ||||||| | ||| ||||| | |||| |||| || ||||| || |||||||
Sbjct 19421 TTGTTGTTACATGAATCTTTGTACAACATAAATGGAGTACCCGTTTCTGTTTGGGCTCCC 19362
Query 116599 AGAATAGCCTTCCATACATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCG 116658
| ||||| | ||| | | ||| | || || | || || | |||
Sbjct 19361 AAGATAGCGTACCACAATTTTTGGGCCTTGATGGTCTGTCTGCCACGGTTTTCTTTTTCG 19302
Query 116659 TACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGCCTCTGAGAGCCCTGGTGCCTTA 116718
|| | || || | | || || || ||||| | | || | | ||||| |||| |
Sbjct 19301 TATCTGGTATATAATTCTTCGAATTCGTCACCGTAAACATCAGCCAAACCTGGGGCCTCA 19242
Query 116719 TCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGG 116778
| ||| |||| | || ||| | ||| | || || | |||||||| | ||||||
Sbjct 19241 TTTGGTGAGAACAAAGTCCAATCACCGTTTTGTTCGACTCTTTTCATGAACAAGTCTGGA 19182
Query 116779 ATCCAGAGCGCCGAGAAGAGATC-CCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACG 116837
||||| | || | ||| | ||| | | | || |||||| | || ||||| |
Sbjct 19181 ATCCATAAAGCTGGGAACAAATCTCTGGCTCTGA-TTTCTTCTTTACCATGATTCTTTCT 19123
Query 116838 CAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACC 116896
| || | || || | ||| || |||||| ||||| | ||||| || | | |||
Sbjct 19122 GATGTCAATGAAATCAAAGATGTCACTGTGCCATGGTTCTAAGTACAAGGCAAAGGCACC 19063
Query 116897 ---CCTTGCGACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCA 116953
||| | |||| | || | ||||| | || || || || || | | ||
Sbjct 19062 AGGTCTTTTG-TTACCACCTTGATCAACATAACGTGCAGTGTTATTGAACACTCTTACCA 19004
Query 116954 TTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAG-ACTTGTTGGCTCTG 117012
||||||| ||||||| ||| ||||| || || ||| || || | | | |
Sbjct 19003 TTGGAATAATACCATTAGAAGTACCATTGGTACCAGCAATGTAAGCACCAG-TAGAACGA 18945
Query 117013 ACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTG 117072
| | |||||| || | |||||| || ||||| | ||||| || || ||| |
Sbjct 18944 ATGTTGTGGATATGTAAACCAATCCCTCCTGCACTTTTTGAAATCAAAGCACACGATTTT 18885
Query 117073 AGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGAC 117132
| | | | || || || || || || ||| |||| | || | | |||||| |||
Sbjct 18884 AAAGTATCATATATACCTTCAATAGAATCATCCTTCATAGCAAGCAAGAAGCATGAAGAC 18825
Query 117133 ATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCT 117192
||||| || |||||||||||||| ||||| | | || | | ||| | || | | |
Sbjct 18824 ATTTGCGGTCTTGGTGTACCAGCATTGAACAAGCAAGGAGAACCATGGGTAAAGAATCTT 18765
Query 117193 TGGGACATCTTATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATT 117252
|| |||||| | ||||| || | ||| || || || | ||||| ||||| |
Sbjct 18764 TGAGACATCAAGTTATAGGTTTCAATGACTCTTGGTATATCATTACCGTGGATACCAACA 18705
Query 117253 GAGACCCGCATAAACATGTATTGGGGTGTTTC 117284
| ||| | ||| | || | ||||||| ||||
Sbjct 18704 GCGACTCTCATGATCAAATGTTGGGGTCTTTC 18673
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613501233642480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |