Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20dubliniensis_20[genbank_20GCA_5F000647555.1_202014-04-23] 778 sequences; 14,044,856 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq229 96.9 2e-15 seq221 84.2 2e-11 >seq229 Length=20730 Score = 96.9 bits (106), Expect = 2e-15 Identities = 100/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 42512 ATGTTACCTAAATCACCAAGATGTCGTTCTTCATCATGCGGTCCGCCGTGTTCTTTATGA 42571 || |||||||||||||||| |||| || ||||| | || | || |||| |||| | Sbjct 13491 ATATTACCTAAATCACCAACGTGTCTGTCATCATCTTCTGGAGCACCATGTTGTTTACCA 13550 Query 42572 AAAGGATTAAAATGTTCACCAGCCGATGTACATCCATTGGTGGTATCTCCAAATTCATGT 42631 || ||||| ||||| |||||| || ||||| |||||||| |||| ||||||| ||| Sbjct 13551 AATGGATTGAAATGAGGACCAGCAGAAGTACAACCATTGGTATTATCACCAAATTGATGA 13610 Query 42632 ATATGAAAACC 42642 ||||| || || Sbjct 13611 ATATGGAATCC 13621 >seq221 Length=21533 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552 || |||| || | || ||||| |||||||| ||| ||||| || || || || | Sbjct 10192 CCACCTCTTAATCTCAAGACCAAGTGCAAAGTAGATTCCTTTTGGATGTTGTAGTCAGAT 10133 Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612 ||| | | || ||||||||||| || |||||||||| | || || || | || Sbjct 10132 AAAGTTCTACCGTCTTCCAATTGTTTACCAGCAAAAATTAATCTTTGTTGGTCTGGTGGA 10073 Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTT--AATCGTCGCTACTGTGTCTGCGCTTTCCA 39670 | ||||||||||| ||||| || || ||| || ||||| | ||| | Sbjct 10072 ATACCTTCTTTGTCTTGAATTTTGGACTTGACATTGTCAATA--GTGTCAGAAGATTCAA 10015 Query 39671 CGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 | || |||||||| |||||||| ||||| || || ||||| || ||||| Sbjct 10014 CTTCTAAAGTAATGGTTTTACCAGTTAAGGTCTTGACGAAAATTTGCAT 9966 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347366306284874