Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20dubliniensis_20[genbank_20GCA_5F000647555.1_202014-04-23]
778 sequences; 14,044,856 total letters
Query= NC_013797.1
Length=108592
Score E
Sequences producing significant alignments: (Bits) Value
seq229 96.9 2e-15
seq221 84.2 2e-11
>seq229
Length=20730
Score = 96.9 bits (106), Expect = 2e-15
Identities = 100/131 (76%), Gaps = 0/131 (0%)
Strand=Plus/Plus
Query 42512 ATGTTACCTAAATCACCAAGATGTCGTTCTTCATCATGCGGTCCGCCGTGTTCTTTATGA 42571
|| |||||||||||||||| |||| || ||||| | || | || |||| |||| |
Sbjct 13491 ATATTACCTAAATCACCAACGTGTCTGTCATCATCTTCTGGAGCACCATGTTGTTTACCA 13550
Query 42572 AAAGGATTAAAATGTTCACCAGCCGATGTACATCCATTGGTGGTATCTCCAAATTCATGT 42631
|| ||||| ||||| |||||| || ||||| |||||||| |||| ||||||| |||
Sbjct 13551 AATGGATTGAAATGAGGACCAGCAGAAGTACAACCATTGGTATTATCACCAAATTGATGA 13610
Query 42632 ATATGAAAACC 42642
||||| || ||
Sbjct 13611 ATATGGAATCC 13621
>seq221
Length=21533
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552
|| |||| || | || ||||| |||||||| ||| ||||| || || || || |
Sbjct 10192 CCACCTCTTAATCTCAAGACCAAGTGCAAAGTAGATTCCTTTTGGATGTTGTAGTCAGAT 10133
Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612
||| | | || ||||||||||| || |||||||||| | || || || | ||
Sbjct 10132 AAAGTTCTACCGTCTTCCAATTGTTTACCAGCAAAAATTAATCTTTGTTGGTCTGGTGGA 10073
Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTT--AATCGTCGCTACTGTGTCTGCGCTTTCCA 39670
| ||||||||||| ||||| || || ||| || ||||| | ||| |
Sbjct 10072 ATACCTTCTTTGTCTTGAATTTTGGACTTGACATTGTCAATA--GTGTCAGAAGATTCAA 10015
Query 39671 CGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719
| || |||||||| |||||||| ||||| || || ||||| || |||||
Sbjct 10014 CTTCTAAAGTAATGGTTTTACCAGTTAAGGTCTTGACGAAAATTTGCAT 9966
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 347366306284874
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |