Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20dubliniensis_20[genbank_20GCA_5F000647555.1_202014-04-23] 778 sequences; 14,044,856 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq30 118 1e-21 seq6 84.2 3e-11 >seq30 Length=68702 Score = 118 bits (130), Expect = 1e-21 Identities = 366/561 (65%), Gaps = 14/561 (2%) Strand=Plus/Plus Query 112276 TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAG 112335 ||||| ||| ||| | | |||||||| || || ||| || |||||||| ||||||| Sbjct 1565 TGTGGCTAGCCATTTTGCAATCTCAAACTGAAACAGGTGGTCCTTATATGCTATACAAAG 1624 Query 112336 ACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCT 112395 ||||||||||| ||| || ||||| || | || || ||| ||| || | | Sbjct 1625 ACGCCTGTAACACAAAATCAAACCAAAAAAACATCGGGACAATAAAGTCTTCAAATTTGT 1684 Query 112396 GTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAA 112455 || ||||| | |||| | || ||| || || |||||||| || | || || Sbjct 1685 GTTGCGAAATTGTTGAATATTCATCACCAGAAGAAACTGCTGTGTGCAATTTAGCGTCTC 1744 Query 112456 TCGCTCTCCCCAAGTATGTG-GATCCAGAGA-----CAAAGACATTTGATTATGAAAAAC 112509 | || | || | ||| || | ||| ||| | | ||||||||| ||||||| Sbjct 1745 TTGCATTGCCTACATATTTGAAAACCACAGAGGATGCCATTGCATTTGATTTTGAAAAAT 1804 Query 112510 TCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAGAAATTTTT 112569 | ||| || || ||| | |||| || | |||| ||| |||||| || | Sbjct 1805 TGCACTCTGTCACCAAAGTCTTGACAAGGAATTTGAACAAAGTGATTGATGTAACAAAAT 1864 Query 112570 ACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTCC 112629 | || ||| | || || | || |||| ||||||||||||||||| | | ||||| | Sbjct 1865 ATCCTGTTAAAACGGCAGAATATTCAAATAAGAGACACCGTCCAATTGCTTTGGGTGTAC 1924 Query 112630 AAGGTCTCGCGGATGTATTCATTCTTTG--TCGCCACGCATTTGATTCCGACGAAGCGAA 112687 |||| | || ||| | || | || | ||| | |||||||| | || || Sbjct 1925 AAGGCTTGGCAGATTTGTT--TGCTGAGCTTCGATTACCTTTTGATTCTGCAATGGCTAA 1982 Query 112688 GGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGAGGC--GAGTTCG 112745 | | ||| | |||||||| || || || || || || |||||||| |||| Sbjct 1983 AACATTAAATATTCAGATATTTGAAACTATATACCATGCTGCACTTGAGGCCTCAGTT-- 2040 Query 112746 GAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGG 112805 || |||||| | || || ||||||||||| || |||| || || || ||| | ||| Sbjct 2041 GAATTGGCAATGAAAGAGGGCCCATATGAAACATTCCAGGGCTCGCCGGCATCAAATGGG 2100 Query 112806 GTGCTTCAATTTGATATGTGG 112826 | | || |||||||||||| Sbjct 2101 ATATTACAGTTTGATATGTGG 2121 >seq6 Length=122245 Score = 84.2 bits (92), Expect = 3e-11 Identities = 97/131 (74%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 163547 TATGGGCGTGTTGCGCCACGATCTGGTCTCGCTGTGAAACACGGTATCCAAGTTGGTGCG 163606 ||||| |||||||| ||||| || || | |||||||| || ||||| | |||||| Sbjct 18139 TATGGCCGTGTTGCACCACGTTCAGGATTGGCTGTGAAGCATGGTATTTCAACTGGTGCT 18198 Query 163607 GGTGTTATTGATCCCGACTACACGGGTGAAGTCAAAGTCGTTCTCTTCAATCATGGAGAC 163666 ||||||||||| |||| || |||||||| ||||| || | || ||||| | || Sbjct 18199 GGTGTTATTGACGCCGATTATCGTGGTGAAGTGAAAGTAGTCTTATTTAATCACAGTGAT 18258 Query 163667 AAAGACTTTGA 163677 ||||| || || Sbjct 18259 AAAGATTTCGA 18269 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620736363280160