Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20dubliniensis_20[genbank_20GCA_5F000647555.1_202014-04-23]
778 sequences; 14,044,856 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq30 118 1e-21
seq6 84.2 3e-11
>seq30
Length=68702
Score = 118 bits (130), Expect = 1e-21
Identities = 366/561 (65%), Gaps = 14/561 (2%)
Strand=Plus/Plus
Query 112276 TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAG 112335
||||| ||| ||| | | |||||||| || || ||| || |||||||| |||||||
Sbjct 1565 TGTGGCTAGCCATTTTGCAATCTCAAACTGAAACAGGTGGTCCTTATATGCTATACAAAG 1624
Query 112336 ACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCT 112395
||||||||||| ||| || ||||| || | || || ||| ||| || | |
Sbjct 1625 ACGCCTGTAACACAAAATCAAACCAAAAAAACATCGGGACAATAAAGTCTTCAAATTTGT 1684
Query 112396 GTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAA 112455
|| ||||| | |||| | || ||| || || |||||||| || | || ||
Sbjct 1685 GTTGCGAAATTGTTGAATATTCATCACCAGAAGAAACTGCTGTGTGCAATTTAGCGTCTC 1744
Query 112456 TCGCTCTCCCCAAGTATGTG-GATCCAGAGA-----CAAAGACATTTGATTATGAAAAAC 112509
| || | || | ||| || | ||| ||| | | ||||||||| |||||||
Sbjct 1745 TTGCATTGCCTACATATTTGAAAACCACAGAGGATGCCATTGCATTTGATTTTGAAAAAT 1804
Query 112510 TCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAGAAATTTTT 112569
| ||| || || ||| | |||| || | |||| ||| |||||| || |
Sbjct 1805 TGCACTCTGTCACCAAAGTCTTGACAAGGAATTTGAACAAAGTGATTGATGTAACAAAAT 1864
Query 112570 ACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTCC 112629
| || ||| | || || | || |||| ||||||||||||||||| | | ||||| |
Sbjct 1865 ATCCTGTTAAAACGGCAGAATATTCAAATAAGAGACACCGTCCAATTGCTTTGGGTGTAC 1924
Query 112630 AAGGTCTCGCGGATGTATTCATTCTTTG--TCGCCACGCATTTGATTCCGACGAAGCGAA 112687
|||| | || ||| | || | || | ||| | |||||||| | || ||
Sbjct 1925 AAGGCTTGGCAGATTTGTT--TGCTGAGCTTCGATTACCTTTTGATTCTGCAATGGCTAA 1982
Query 112688 GGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGAGGC--GAGTTCG 112745
| | ||| | |||||||| || || || || || || |||||||| ||||
Sbjct 1983 AACATTAAATATTCAGATATTTGAAACTATATACCATGCTGCACTTGAGGCCTCAGTT-- 2040
Query 112746 GAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGG 112805
|| |||||| | || || ||||||||||| || |||| || || || ||| | |||
Sbjct 2041 GAATTGGCAATGAAAGAGGGCCCATATGAAACATTCCAGGGCTCGCCGGCATCAAATGGG 2100
Query 112806 GTGCTTCAATTTGATATGTGG 112826
| | || ||||||||||||
Sbjct 2101 ATATTACAGTTTGATATGTGG 2121
>seq6
Length=122245
Score = 84.2 bits (92), Expect = 3e-11
Identities = 97/131 (74%), Gaps = 0/131 (0%)
Strand=Plus/Plus
Query 163547 TATGGGCGTGTTGCGCCACGATCTGGTCTCGCTGTGAAACACGGTATCCAAGTTGGTGCG 163606
||||| |||||||| ||||| || || | |||||||| || ||||| | ||||||
Sbjct 18139 TATGGCCGTGTTGCACCACGTTCAGGATTGGCTGTGAAGCATGGTATTTCAACTGGTGCT 18198
Query 163607 GGTGTTATTGATCCCGACTACACGGGTGAAGTCAAAGTCGTTCTCTTCAATCATGGAGAC 163666
||||||||||| |||| || |||||||| ||||| || | || ||||| | ||
Sbjct 18199 GGTGTTATTGACGCCGATTATCGTGGTGAAGTGAAAGTAGTCTTATTTAATCACAGTGAT 18258
Query 163667 AAAGACTTTGA 163677
||||| || ||
Sbjct 18259 AAAGATTTCGA 18269
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620736363280160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |