Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20dubliniensis_20[genbank_20GCA_5F000647555.1_202014-04-23]
778 sequences; 14,044,856 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq65 199 5e-46
seq6 89.7 6e-13
>seq65
Length=45114
Score = 199 bits (220), Expect = 5e-46
Identities = 1058/1662 (64%), Gaps = 51/1662 (3%)
Strand=Plus/Minus
Query 109507 GACTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGTCGATGATACACTTTTGG 109566
|| ||||| ||||| || ||| | | | |||||| ||||||||||| ||| ||||||
Sbjct 20309 GATTGAGATTGATCAATAAATGCAGCTCTATCAGCAGCCATGTCGATAATATGCTTTTGT 20250
Query 109567 CTAATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCACGATGTTT 109626
||||||||||||||||||||||| ||| || ||||| ||||||| | |
Sbjct 20249 GAGATTTCCCAGACAGTCTTGTACAATGCCTTAATTTCATCAGGAATGTTTGGCAAAGCT 20190
Query 109627 TGAATAGAGCCACCAGCCTTCACCATGAGA-TCC--TTCATCTCTTTCGACCAGAGACCG 109683
|||||||| ||| || | || | | | | ||||| | | ||||| |||
Sbjct 20189 TGAATAGA---ACCGTTGTTAGCAATAATACTACTTTTCATAGCATCATTCCAGACACCC 20133
Query 109684 ACCTTTTTGAGAT-CGTCAACAAGATGCTTGTTGACCACGACAAATTCACCAGCAAGTGT 109742
| | | || | ||||||| || ||||| | |||||| || || |
Sbjct 20132 AAATCAACCAAATCCTTCAACAA-ATATGGATTGACAATTTGAAATTCTCCTGCTAACAC 20074
Query 109743 GCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTG 109802
| || | ||| ||||||| ||||| |||||||||||||||||||| || | |||||
Sbjct 20073 TCTTCTGGAGTAAATGTTAGAAGTGTATGGTTCGAAACACTCATTGTTACCCAAAATTTG 20014
Query 109803 TGCAGTGGAAGCTGTGGGCATGGGAGCCA-TGAGAAGACTGTTTCGGAGACCCTTCGTCT 109861
|| || ||||| || ||||| ||||| | | | ||| ||||| | ||| | |
Sbjct 20013 TGATGTAGAAGCAGTAGGCATTGGAGCAACTAATAAG-GAGTTTCTCATACCATGC---- 19959
Query 109862 TTACCCGCTCACGCATTGCGTCCCAAT-CATAACGACCACTAAATTTAGT---CTCACCA 109917
||| | | ||| || ||| || | | | | |||| ||| | |
Sbjct 19958 TTAGC------CAAATTTTGTTTTAATGTATCCCAATCCCATAATTCAGTTGGTTTTCTG 19905
Query 109918 TCCCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGA-AACTCTCGTA 109976
| ||| | ||| || | || ||| | || ||||| | | ||| || || | |||||
Sbjct 19904 TTCCATAAATCAAACTGTAATAAACCTTGAGAGGCAGG-GGAGCCTGGATAAGTTTCGTA 19846
Query 109977 CGACCCCTCAACCTCGGCCAACTCGGATGAAGCCTCTAGTGCCGCATGATACATAGTCTC 110036
| || || | | ||||| || ||||| || | || ||||| || ||||||||
Sbjct 19845 GGCACCTTCTTCTTTAGCCAATTCAACAGAAGCTTCAACAGCAGCATGGTAAATAGTCTC 19786
Query 110037 AAAAATATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGGGAAGACCACAA-AGAA 110095
||||| ||| || | | | |||| |||| || || | | | ||| |
Sbjct 19785 GAAAATTTGAATGTTTAATTCTCTGGCTTCTTGGGAGTCAAATGGTA-ATCTCAATTCCA 19727
Query 110096 TAAACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGC 110155
|||| |||| || | ||| |||||||| | | |||| || | || |||| || ||
Sbjct 19726 TAAAGGCATCAGCCAAACCTTGAACACCCAAAGCAATTGGTCTGTGTCTCATATTTGA-- 19669
Query 110156 GTCGAGCAGTTTCT---ACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCG 110212
|| | | |||| || |||||| ||||||||| || || | || | || |
Sbjct 19668 -TCTTTCGGCTTCTGGAACTGGGTAATGGTTGCGGTCAATAACTCTGTTCAAGTTACGGG 19610
Query 110213 TCACAGTCTTCGTGATTTCATGGAGTTTGTCGTAATCGAAC---GTTTTCGT---CTCCT 110266
| || ||| |||| ||||| | || || | | | || || || | ||
Sbjct 19609 TGACTACCTTGGTGACATCATGTAACTTATCAAAGTTGTACCAAGTATTACTTTGATCGC 19550
Query 110267 TATTGACATATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGT 110326
| | ||| || || | |||||| || || | || || |||| || |||
Sbjct 19549 TTTCAACAAATGATGGTAAAGCAATGGAGGCCAAGTTACAAACAGCGACTTCATCTGGAG 19490
Query 110327 CGGTGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCT 110386
| | ||||| | |||||| ||| ||||||||| ||||| | |||||||||||| |
Sbjct 19489 CAGAATATTCAACAATTTCACAACATAAGTTGGAAGATTTAATAATACCCAAGTTCTTTT 19430
Query 110387 GATTCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCT 110446
| || |||||| ||| |||| ||| || || | ||| |||| ||||| ||||| || |
Sbjct 19429 GGTTGGATTTGTTGTTACATGAATCTTTGTACAACATAAATGGAGTACCCGTTTCTGTTT 19370
Query 110447 GTGACTTGAGAATGGCCTTCCATACATCGGCGGCGGGGACAGTTGCGTTAGCGA-GACCT 110505
| | | || || | ||| | | ||| || | | || || | | |
Sbjct 19369 GGGCTCCCAAGATAGCGTACCACAATTTTTGGGCCTTGA-TGGTCTGTCTGCCACGGTTT 19311
Query 110506 TCCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCC 110565
|| | ||||| |||| || || || || ||||| | ||||| ||||||| | |||
Sbjct 19310 TCTTTTTCGTATCTGGTATATAATTCTTCGAATTCGTCACCGTAAACATCAGCCAAACCT 19251
Query 110566 TTCGCCTTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAAC 110625
|||| | || |||| | | ||||| || | || || || |||||||||
Sbjct 19250 GGGGCCTCATTTGGTGAGAACAAAGTCCAATCACCGTTTTGTTCGACTCTTTTCATGAAC 19191
Query 110626 AGGTCAGGAATCCACATCGCCGAGAAAAGGTCAC-GGCAACGAGCCTCTTCATCACCTTG 110684
| ||| |||||||| | || | ||| | || | ||| || ||||| | ||| ||
Sbjct 19190 AAGTCTGGAATCCATAAAGCTGGGAACAAATCTCTGGCTCTGA-TTTCTTCTTTACCATG 19132
Query 110685 GTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGC 110744
|| | | || | || || | ||| || |||||||||||| | || | ||
Sbjct 19131 ATTCTTTCTGATGTCAATGAAATCAAAGATGTCACTGTGCCATGGTTCTAAGTACAAGGC 19072
Query 110745 GATGGATCC----CTTACGACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGA 110800
| || || ||| | ||| | || | |||||| ||||| ||| |||||| |
Sbjct 19071 AAAGGCACCAGGTCTTTTG-TTACCACCTTGATCAACATAACGTGCAGTGTTATTGAACA 19013
Query 110801 CCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAAT-TCTGGACTTA 110859
| || | ||| |||||||| |||| || |||||| ||||| ||| | | || |
Sbjct 19012 CTCTTACCATTGGAATAATACCATTAGAAGTACCATTGGTACCAGCAATGTAAGCAC-CA 18954
Query 110860 TTGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCA 110919
| | |||||||| ||||||||| | |||||| || || || | || ||| |||
Sbjct 18953 GTAGAACGAATGTTGTGGATATGTAAACCAATCCCTCCTGCACTTTTTGAAATCAAAGCA 18894
Query 110920 CACTCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAG 110979
||| | | | ||| |||| ||||| ||||| ||||| |||| | |||| | |||
Sbjct 18893 CACGATTTTAAAGTATCATATATACCTTCAATAGAATCATCCTTCATAGCAAGCAAGAAG 18834
Query 110980 CAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATG 111039
|| |||||||| || || | || || || |||||||| | ||| | |||| |
Sbjct 18833 CATGAAGACATTTGCGGTCTTGGTGTACCAGCATTGAACAAGCAAGGAGAACCATGGGTA 18774
Query 111040 AACAGACCTTGGGACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTACCGTGA 111099
|| | | ||| |||||| ||| || || || | | |||| ||| ||||||||
Sbjct 18773 AAGAATCTTTGAGACATCAAGTTATAGGTTTCAATGACTCTTGGTATATCATTACCGTGG 18714
Query 111100 ATACCAATGGCAACTCGCATGAACATATATTGAGGCGTTTCG 111141
||||||| || |||| ||||| || || ||| || |||||
Sbjct 18713 ATACCAACAGCGACTCTCATGATCAAATGTTGGGGTCTTTCG 18672
>seq6
Length=122245
Score = 89.7 bits (98), Expect = 6e-13
Identities = 126/175 (72%), Gaps = 4/175 (2%)
Strand=Plus/Plus
Query 158478 TTATGGGCGTGTGGCACCTCGTTCGGGTTTGGCTGTGAAGCACTGTA--TCAACGTTGGT 158535
|||||| ||||| ||||| ||||| || |||||||||||||| ||| ||||| ||||
Sbjct 18138 TTATGGCCGTGTTGCACCACGTTCAGGATTGGCTGTGAAGCATGGTATTTCAAC--TGGT 18195
Query 158536 GCGGGGGTCATCGATCCTGATTATACTGGAGAAGTCAAAGTCGTTCTCTTCAATCATGGA 158595
|| || || || || | |||||| ||| ||||| ||||| || | || ||||| |
Sbjct 18196 GCTGGTGTTATTGACGCCGATTATCGTGGTGAAGTGAAAGTAGTCTTATTTAATCACAGT 18255
Query 158596 GACAAGGACTTTGAGGTTAAGAAGGGTGATCGCATCGCACAGCTTGTTCTAGAAC 158650
|| || || || || |||| | ||||| | || || || | || ||||||
Sbjct 18256 GATAAAGATTTCGAAATTAAAGAAGGTGACAGAATTGCTCAATTGGTATTAGAAC 18310
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588970272208400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |