Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20dubliniensis_20[genbank_20GCA_5F000647555.1_202014-04-23]
778 sequences; 14,044,856 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq65 168 8e-37
seq6 111 2e-19
seq241 105 8e-18
seq240 93.3 5e-14
>seq65
Length=45114
Score = 168 bits (186), Expect = 8e-37
Identities = 847/1324 (64%), Gaps = 43/1324 (3%)
Strand=Plus/Minus
Query 105896 TTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTCGTCGTGTAGGGT 105955
|||||||| ||| ||||| || | |||||| || ||||| | ||||| |||
Sbjct 20102 TTGACAATTTGAAATTCTCCTGCTAACACTCTTCTGGAGTAAATGTTAGAAGTGTATGGT 20043
Query 105956 TCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATC 106015
|| || || ||||| |||||||| ||||||| || || || || |||||||| || |
Sbjct 20042 TCGAAACACTCATTGTTACCCAAAATTTGTGATGTAGAAGCAGTAGGCATTGGAGCAACT 19983
Query 106016 AAAAGACTGTTACGAAGACCCT--TTTCCTTGATGCGTTCCTTGAGAACATCCCAGTCG- 106072
|| | ||| | | ||| | || | || || || | |||||| ||
Sbjct 19982 AATAAGGAGTTTCTCATACCATGCTTAGCCAAATT--TTGTTTTAATGTATCCCAATCCC 19925
Query 106073 -TAGTTGAGCTTGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTGGGACGTGGG 106131
|| || || ||||||| |||| | | |||||| || | | ||||| || | ||
Sbjct 19924 ATAATTCAG-TTGGTTTTCTGTTCC-ATAAATCAAACTGTAATAAACCTTGAGAGGCAGG 19867
Query 106132 AGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCA-CAGCTCGCCTCCA 106190
|| || | | || || |||| ||||| ||| |||||||||| ||| || || |
Sbjct 19866 GGAGCCTGGATAAGTTTCGTAGGCACCTTCTTCTTTAGCCAATTCAACAGAA-GCTTCAA 19808
Query 106191 GGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAAT 106250
| || || || || || || || || || || | || ||||||| | || |
Sbjct 19807 CAGCAGCATGGTAAATAGTCTCGAAAATTTGAATGTTTAATTCTCTGGCTTCTTGGGAGT 19748
Query 106251 CAAATGCGTAGCGGCACAAA---ATAAATACATCCGCGAGACCTTGAACACCCAAACCAA 106307
|||||| ||| | ||| ||||| |||| || | |||||||||||||||| |||
Sbjct 19747 CAAATG-GTAAT--CTCAATTCCATAAAGGCATCAGCCAAACCTTGAACACCCAAAGCAA 19691
Query 106308 TAGGTCTGTGTCGCATATTAGA-CTTTCGCGCAGTCT-CAACGGGATAAAAATTTCTGTC 106365
| |||||||||| |||||| || |||||| || ||| ||| || ||| || | |||
Sbjct 19690 TTGGTCTGTGTCTCATATTTGATCTTTCG-GC-TTCTGGAACTGGGTAATGGTTGCGGTC 19633
Query 106366 AATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATA--- 106422
||| |||| ||| | || ||| || | ||| |||| ||||| | || ||| |
Sbjct 19632 AATAACTCTGTTCAAGTTACGGGTGACTACCTTGGTGACATCATGTAACTTATCAAAGTT 19573
Query 106423 --ATCAA----AAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAA 106476
| ||| | | || || ||| | ||| | ||| | || || || |||||
Sbjct 19572 GTACCAAGTATTACTTTGA-TCGCTT--TCAACAAATGATGGTAAAGCAATGGAGGCCAA 19516
Query 106477 ATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGA 106536
|| |||||||| ||||| | | | || || | |||||| ||| ||||||||
Sbjct 19515 GTTACAAACAGCGACTTCATCTGGAGCAGAATATTCAACAATTTCACAACATAAGTTGGA 19456
Query 106537 ACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAG 106596
| ||||| | ||||| ||||||||||| || ||||| || | ||| ||||| |
Sbjct 19455 AGATTTAATAATACCCAAGTTCTTTTGGTTGGATTTGTTGTTACATGAATCTTTGTACAA 19396
Query 106597 CATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACACATCGGCGGC 106656
||| | || || ||||| || || || | | || || | ||||| | |||
Sbjct 19395 CATAAATGGAGTACCCGTTTCTGTTTGGGCTCCCAAGATAGCGTACCACAATTTTTGGGC 19336
Query 106657 --TGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAAC 106714
|| | || | || | || || ||||| | || || | |||| ||
Sbjct 19335 CTTGATGGTCTGTC--TGCCACGGTTTTCTTTTTCGTATCTGGTATATAATTCTTCGAAT 19278
Query 106715 TCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGA 106774
|| ||||| | || | | |||||| |||| | ||| |||| | || ||| | |
Sbjct 19277 TCGTCACCGTAAACATCAGCCAAACCTGGGGCCTCATTTGGTGAGAACAAAGTCCAATCA 19218
Query 106775 CCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCT 106834
|| | || || | |||||||| | |||||||||||| | | || || | ||||
Sbjct 19217 CCGTTTTGTTCGACTCTTTTCATGAACAAGTCTGGAATCCATAAAGCTGGGAACAAATCT 19158
Query 106835 CT-ACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATC 106893
|| | | || ||||| | ||| || || || | |||| ||| || | ||| ||
Sbjct 19157 CTGGCTCTGA-TTTCTTCTTTACCATGATTCTTTCTGATGTCAATGAAATCAAAGATGTC 19099
Query 106894 CGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGACGCCCAGCTTGAT 106949
||||||||| || | || | || | | || |||| | ||| ||||||
Sbjct 19098 ACTGTGCCATGGTTCTAAGTACAAGGCAAAGGCACCAGGTCTTTTG-TTACCACCTTGAT 19040
Query 106950 TTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGAC 107009
||||| || || ||| || || || | | ||||||||||||||||| || ||
Sbjct 19039 CAACATAACGTGCAGTGTTATTGAACACTCTTACCATTGGAATAATACCATTAGAAGTAC 18980
Query 107010 CATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATAC 107069
|||| || || ||| || | | | | | | ||||| || | ||||| |
Sbjct 18979 CATTGGTACCAGCAATGTAAGCACCAGTAGAACGAATGTTGTGGATATGTAAACCAATCC 18920
Query 107070 CCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTG 107129
| || || | ||||| || |||||| | | ||| |||| ||||| | || |
Sbjct 18919 CTCCTGCACTTTTTGAAATCAAAGCACACGATTTTAAAGTATCATATATACCTTCAATAG 18860
Query 107130 AGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCAT 107189
| || ||||| | || | | |||||| ||||| ||||||||||||||||||||||
Sbjct 18859 AATCATCCTTCATAGCAAGCAAGAAGCATGAAGACATTTGCGGTCTTGGTGTACCAGCAT 18800
Query 107190 TGAA 107193
||||
Sbjct 18799 TGAA 18796
>seq6
Length=122245
Score = 111 bits (122), Expect = 2e-19
Identities = 110/141 (78%), Gaps = 1/141 (1%)
Strand=Plus/Plus
Query 155044 TATGGTCGTGTTGCACCACGATCCGGTCTCGCTGTGAAGCATGGTATTCAAGTTGGTGCG 155103
||||| |||||||||||||| || || | |||||||||||||||||| | ||||||
Sbjct 18139 TATGGCCGTGTTGCACCACGTTCAGGATTGGCTGTGAAGCATGGTATTTCAACTGGTGCT 18198
Query 155104 GGTGTTATTGATCCCGACTATACAGGTGAAGTCAAAGTCGTTCTCTTCAATCACGGAGAC 155163
||||||||||| |||| ||| |||||||| ||||| || | || |||||| | ||
Sbjct 18199 GGTGTTATTGACGCCGATTATCGTGGTGAAGTGAAAGTAGTCTTATTTAATCACAGTGAT 18258
Query 155164 AAAGACTTTG-AGGTAAAGAA 155183
||||| || | | |||||||
Sbjct 18259 AAAGATTTCGAAATTAAAGAA 18279
>seq241
Length=19529
Score = 105 bits (116), Expect = 8e-18
Identities = 352/536 (66%), Gaps = 39/536 (7%)
Strand=Plus/Plus
Query 117274 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCT 117333
||||| || ||| | ||| ||||||| | |||| | || |||||||| | |||
Sbjct 9213 GCAAAGTCAGTGTGTAAACCTTCATCTCTGCAAATCAACTCGTTTGAGAAAGTCAACCCT 9272
Query 117334 GGCATGAGACCCCGCTTCTTCAACCAATAAATAGC-GCAGAATGACCCGGAGAAGAAGAT 117392
||||| | ||| | ||| |||||||| | |||| ||| ||||| || ||||| ||
Sbjct 9273 GGCATTAAACCTCTCTTTTTCAACCAGAAGATAGAAGCA-AATGAACCACTAAAGAAAAT 9331
Query 117393 ACCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTG----T 117448
||| || || ||||| |||| | | || | | | || ||| | |
Sbjct 9332 ACCTTCAACTGCAGCAAAGGCAACTAATCTTTCACCATA----CAAGGCTTCATCATCTT 9387
Query 117449 CAAACCATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGG--ATGGC 117506
|| |||||| || ||||| | || ||||| | ||||||||| | | |||| |||||
Sbjct 9388 GAATCCATTTGATAGCCCAGTCAGCTTTCTTTTGAATACATGGAATA--TTGGCAATGGC 9445
Query 117507 TTCAAATAACT-----GCTTCTTTTCAGATCCATCCTTAATGTATTTGTCAATCAATTTT 117561
| |||||| | ||||||| || ||| || ||||| | ||||| |||
Sbjct 9446 ATTAAATAAGTAATCGGCTTCTTG--AGG---ATCTTTTATGTAAGTTTCAATTAATAAA 9500
Query 117562 GAATATGTTTCGCCATGAACCATTTC-ATTATGGCATTGATATGCGTAGAATGAGCGCGC 117620
|| || ||||| ||||| |||| || ||| | || | |||||||||| ||
Sbjct 9501 GAGTAGGTTTCTGAATGAATGTTTTCCATCATGATTTGGAAAC-CGTAGAATGATTTGGC 9559
Query 117621 TTCGCTTATCTGCACTTCATCCGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATC 117680
|||| | || |||||| || || || | | | | || ||| |||||| |||||
Sbjct 9560 TTCGGGAAGTTGAACTTCAGTCGAGAAGTTTTCAATTAAGTTTTCACCAACAATACCATC 9619
Query 117681 GGACCCAGCAAAGAATGCCAGGATGTACTTTATG-----AATTTCTTTTCATTTTCATTC 117735
|| |||| || ||||||| |||| || ||| ||||| |||||||||||
Sbjct 9620 AGAAGCAGCGAAAAATGCCAA----TACTCTAGAGACAAAATATCTTT-CATTTTCATTC 9674
Query 117736 A---GGGTCTTCCAGTCGTCAAGATCTTTGGACAAATCAACTTCTTCCGCAGTCCA 117788
| | | |||||||| || | |||||| |||||| | |||||| || |||||
Sbjct 9675 AATTTGTTATTCCAGTCATCCAAATCTTTACTCAAATCGATTTCTTCGGCGGTCCA 9730
>seq240
Length=19657
Score = 93.3 bits (102), Expect = 5e-14
Identities = 193/284 (68%), Gaps = 9/284 (3%)
Strand=Plus/Plus
Query 9279 TCAAAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGC- 9337
||||| |||||||| ||| ||| | ||| || | ||| ||| ||||||||||| ||
Sbjct 8572 TCAAACCCATCCATTTCTACCAACAATTGATTCAATGTTGTTTCACGTTCATCATTGGCA 8631
Query 9338 ----TGGCATACCACCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGA 9393
|||||| || | | | ||||| || || | ||||| || ||||||| || |
Sbjct 8632 CCAGTGGCATTCCCCTTGGAA--CGTTGTTTACCAATAGCATCGATTTCATCAACAAACA 8689
Query 9394 CAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCA 9453
|||| | || |||||| || || | | ||| | ||| ||||| || || || |
Sbjct 8690 CAATCGAAGGGGCATTTTCACGTGCAGTCTTAAATAAATCACGAACTCTAGATGCTCCAA 8749
Query 9454 CACCAACAAACATCTCCACAAAGTTTG-CGGCGGAACATTGGATGAAGGGGACATTAGAT 9512
||||||||||||| || ||||| | || | | |||| | | ||| || || | |
Sbjct 8750 CACCAACAAACATTTCTACAAATTCTGACCCAGAAACAGAGTA-GAATGGAACTCCTGCT 8808
Query 9513 TCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTgg 9556
||||| ||| | || ||| || | ||| ||||| || |||||
Sbjct 8809 TCACCAGCAGTTGCCTTGGCAAGTAAAGTTTTACCTGTCCCTGG 8852
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589975062436720
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