Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20dubliniensis_20[genbank_20GCA_5F000647555.1_202014-04-23] 778 sequences; 14,044,856 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq241 383 2e-101 seq65 378 8e-100 seq22 284 1e-71 seq30 250 3e-61 >seq241 Length=19529 Score = 383 bits (424), Expect = 2e-101 Identities = 626/896 (70%), Gaps = 7/896 (1%) Strand=Plus/Plus Query 18669 TTTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACA 18728 |||||| || || | ||||||||||||||||||||| || || || | || || || Sbjct 8918 TTTTTGGTAGTCTGAAACTCTTTTTTCAAAGAAATTGGTCTTACCAGCCAAAGAAATGTT 8977 Query 18729 TTCCATAAAATCAAATGGATTTTTTACATTATATAtttttttGAATCCTAATTCTAATAG 18788 |||||| |||||||||||||| | ||||| |||| ||| ||| ||||| | || | Sbjct 8978 TTCCATGAAATCAAATGGATTAGTAACATTGTATACTTTCTTGTTACCTAAGGCCAACAA 9037 Query 18789 TAGTCTATCCGCTACAAATTTAATATATGTGTTCATCATATCACAATTCATTCCTATTAA 18848 | |||||| || || |||| ||| ||| ||||| | ||| ||||| || | || Sbjct 9038 CAATCTATCAGCGACGAATTCAATGTATTGACACATCAAGTTACAGTTCATACCCAACAA 9097 Query 18849 TTTAACAGGTAGTGCATCTGTAAGAAATTCTTGTTCTATATTTACTGCCTCTGATATAAT 18908 || || || ||||| |||| | |||| || | || || || || | ||||| Sbjct 9098 GGACACTGGAAGAGCATCGGTAAAGTACTCTTTCTCAACATCAACAGCTTCAGTAATAAT 9157 Query 18909 AGATACAACTCTATCTTCATTAGGAGGGTATAGAAGATGTTTAAACATCAAACATGCAAA 18968 | |||| | ||| | || || | | | ||| ||||| ||||| ||||| Sbjct 9158 TTTTTCAACAATCTCTGGAGATGGTCTGTTTTGCAAATGAGCAAACAATAAACAAGCAAA 9217 Query 18969 ATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCAT 19028 ||| |||| || || ||||| | ||||| || || || || || || || ||||| Sbjct 9218 GTCAGTGTGTAAACCTTCATCTCTGCAAATCAACTCGTTTGAGAAAGTCAACCCTGGCAT 9277 Query 19029 CAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTC 19088 | ||||| ||||| |||||||| |||||||||||||| ||| |||||| |||||||| Sbjct 9278 TAAACCTCTCTTTTTCAACCAGAAGATAGAAGCAAATGAACCACTAAAGAAAATACCTTC 9337 Query 19089 TACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGAATCCATTT 19148 ||||| ||||| ||||||| |||||| ||||| || |||| || ||||||||||| Sbjct 9338 AACTGCAGCAAAGGCAACTAATCTTTCACCATACAAGGCTTCATCATCTTGAATCCATTT 9397 Query 19149 CAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTAAATAGATA 19208 | ||||| ||||| ||||||| | |||||| || | | || | |||||||| || Sbjct 9398 GATAGCCCAGTCAGCTTTCTTTTGAATACATGGAATATTGGCAATGGCATTAAATAAGTA 9457 Query 19209 CATACGC-TCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTACATTTCTGAAT 19267 || || || | | |||||| | || | || || |||||| ||| ||||||||| Sbjct 9458 -ATCGGCTTCTTGAGGATCTTTTATGTAAGTTTCAATTAATAAAGAGTAGGTTTCTGAAT 9516 Query 19268 GAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCTGTACTT 19327 |||| ||||| || || || || ||||| || || | ||||| | | || |||| Sbjct 9517 GAATGTTTTCCATCATGATTTGGAAACCGTAGAATGATTTGGCTTCGGGAAGTTGAACTT 9576 Query 19328 CACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAAAATG 19387 || | | || |||| | || |||||| ||| || |||||| ||| || ||||||| Sbjct 9577 CAGTCGAGAAGTTTTCAATTAAGTTTTCACCAACAATACCATCAGAAGCAGCGAAAAATG 9636 Query 19388 CTAATACATGTTTA-ATAAAATGTTTTTCATCTGAGGTTAAT---GTATTCCAATCATTA 19443 | ||||| | | | | ||||| | |||||| | | ||| ||||||| |||| Sbjct 9637 CCAATAC-TCTAGAGACAAAATATCTTTCATTTTCATTCAATTTGTTATTCCAGTCATCC 9695 Query 19444 ATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTTTTATAC 19503 | ||||||| ||||| | |||||| | ||||| |||||||| || ||||| ||||| Sbjct 9696 AAATCTTTACTCAAATCGATTTCTTCGGCGGTCCAGAAAGAAGCTTCAGCTTTCTTATAA 9755 Query 19504 ATGTTCCATATATCACGATATTGTATAGGAAATATAACAAATCTATTTTTATTTTC 19559 | |||||| || ||| | ||| || || || || ||| | | | ||| ||||| Sbjct 9756 AAGTTCCAAATTTCATGGTATCTGATTGGGAACATCACATAACGACGTTTGTTTTC 9811 >seq65 Length=45114 Score = 378 bits (418), Expect = 8e-100 Identities = 1453/2276 (64%), Gaps = 72/2276 (3%) Strand=Plus/Minus Query 46983 GTAAACTTAATTGGATTACTCGCTGATTTTGTTCGTAAATAATACATACCAGTCTTTAAA 47042 ||||| | ||| | | ||| || | || ||||| || ||||||||||||||||| ||| Sbjct 20441 GTAAATTGAATAGCAGCACTGGCAGCTTGTGTTCTCAAGTAATACATACCAGTCTTCAAA 20382 Query 47043 CCTAAACTCCATCCATAGAAATGCATACTAGTTAATTTAGAATAACTAGGTTCTGAAATA 47102 ||| |||| ||||||||||||||||| || || ||| | || ||| || Sbjct 20381 CCTTTCTTCCAACCATAGAAATGCATACTGGTCAACTTACCCATTGTTGGGTCTTTGATG 20322 Query 47103 TGAATATTAAGAGATTGACTCTGATCAATAAATGCACCTCTATCAGCTGCCATATCTAAA 47162 ||||| || | |||||| ||||||||||||||| |||||||||| ||||| || | | Sbjct 20321 TGAATGTTTAATGATTGAGATTGATCAATAAATGCAGCTCTATCAGCAGCCATGTCGATA 20262 Query 47163 ATAACCCTTTGTGGTATCTCCCATACTGTTTTATAAATTTGTTTAATGTCTTCTGGGAGA 47222 ||| | |||||| || ||||| || || || || | | ||||| || || || | Sbjct 20261 ATATGCTTTTGTGAGATTTCCCAGACAGTCTTGTACAATGCCTTAATTTCATCAGGAATG 20202 Query 47223 TTAGT---ATTTTGAATAGATCCTCCgttttctataattttgttttttaattcatttgac 47279 || | | ||||||||| || ||| | ||||| | |||| | ||| | Sbjct 20201 TTTGGCAAAGCTTGAATAGAACCGTTGTTAGCAATAATACTACTTTTCATAGCATCATTC 20142 Query 47280 caaagttttcgttcagttaatgtttttaaAAGATGAGGATTAACAATTTGAAATTCTCCA 47339 || | ||| || || || | || ||||| ||||||||||||||||| Sbjct 20141 CAGACACCCAAATCAACCAAATCCTTCAACAAATATGGATTGACAATTTGAAATTCTCCT 20082 Query 47340 GATAGTACTCTACGGCTATATATATTACTTGTATATGGTTCTATAGATTCATTATTTCCA 47399 | || ||||| | | || || ||| || |||||||| | | | ||||| || || Sbjct 20081 GCTAACACTCTTCTGGAGTAAATGTTAGAAGTGTATGGTTCGAAACACTCATTGTTACCC 20022 Query 47400 AAAATTTGAGCAGTTGATGCTGTAGGCATGGATGCAACTAATAAGCTATTTCTTACTCCA 47459 |||||||| | || || || |||||||| | |||||||||||| ||||| | ||| Sbjct 20021 AAAATTTGTGATGTAGAAGCAGTAGGCATTGGAGCAACTAATAAGGAGTTTCTCATACCA 19962 Query 47460 TATTTTTGTATCTNNNNNNNNNNNNGTTTCCAATCCCAAAGATCTGATGGAACAACATTC 47519 | || | | | ||||||||| | || | ||| ||| Sbjct 19961 TGCTTAGCCAAATTTTGTTTTAATGTATCCCAATCCCATAATTCAGTTGGTTTTCTGTTC 19902 Query 47520 CAAAAATCATATTGAAGAATTCCTTTACTTATCGGAGAACCATTATATGTTTTATAAGGA 47579 || |||||| | || | | |||| | || || || ||| |||| || | | Sbjct 19901 CATAAATCAAACTGTAATAAACCTTGAGAGGCAGGGGAGCCTGGATAAGTTTCGTAGGCA 19842 Query 47580 CCGTATAGTTTAGCGAGTTCACAACTTGCTTCCAATGCACTATAATATATTGTTTCAAAT 47639 || | | |||||| | |||| | ||||| | ||| || || || || || || Sbjct 19841 CCTTCTTCTTTAGCCAATTCAACAGAAGCTTCAACAGCAGCATGGTAAATAGTCTCGAAA 19782 Query 47640 ATTTTTATGTTTAGATTC-CTTGCTTCTGATGATTCAAAAGGATANNNNNNNNNNNNNAA 47698 |||| ||||||| |||| || |||||| || ||||| || | || Sbjct 19781 ATTTGAATGTTTA-ATTCTCTGGCTTCTTGGGAGTCAAATGGTAATCTCAATTCCATAAA 19723 Query 47699 TGTATCTGCCAATCCTTGAACACCAATACCAATTGGTCTATGAGTTTTATTAGAAAACTC 47758 | ||| ||||| ||||||||||| | | |||||||||| || | |||| || || Sbjct 19722 GGCATCAGCCAAACCTTGAACACCCAAAGCAATTGGTCTGTGTCTCATATTTGATCTTTC 19663 Query 47759 AGCTTCTGGTAATGGATATTTGTTTATATCTATAATTTTATTTAG---ANNNNNNNNNNN 47815 |||||||| | ||| || | ||| || |||| | | || | | Sbjct 19662 GGCTTCTGGAACTGGGTAATGGTTGCGGTCAATAACTCTGTTCAAGTTACGGGTGACTAC 19603 Query 47816 NNNNNNNACAATTTCTCTTAATTTATTAAAAT-----CAA-----ACTTGTTAT---TTA 47862 ||| || ||| |||| ||| | ||| |||| | || || Sbjct 19602 CTTGGTGACA---TCATGTAACTTATCAAAGTTGTACCAAGTATTACTT-TGATCGCTTT 19547 Query 47863 TAACAAACC-TATTAAGTGCTATAGATGCTAGATTACATACAGCTACCTCATTTGGATTA 47921 |||||| | ||| || || || || | ||||| ||||| || |||| |||| | Sbjct 19546 CAACAAATGATGGTAAA-GCAATGGAGGCCAAGTTACAAACAGCGACTTCATCTGGAGCA 19488 Query 47922 GTATATTGTATTATTTCAGCACATAGATTACCACATTTGATAGTACCCAAATTTTGATGA 47981 | ||||| | |||||| ||||| || | |||| ||| ||||||| || | || Sbjct 19487 GAATATTCAACAATTTCACAACATAAGTTGGAAGATTTAATAATACCCAAGTTCTTTTGG 19428 Query 47982 TT--ATTNNNNTTGTTACATGCGTCCTTGTAAAGCATAAAAGGTGTTCCAGTTTCTATCT 48039 || ||| |||||||||| || ||||| | |||||| || || || |||||| | | Sbjct 19427 TTGGATTTG--TTGTTACATGAATCTTTGTACAACATAAATGGAGTACCCGTTTCTGTTT 19370 Query 48040 GAGATTCAATGATAGATTTCCAAACAGTCCTAGCCTTTATAACAGCTCTAGCTTTATTAT 48099 | | | | | ||||| | ||| | | ||||| || ||| | || | Sbjct 19369 GGGCTCCCAAGATAGCGTACCACAATTTTTGGGCCTTGATGGTCTGTCTGCCACGGTTTT 19310 Query 48100 CATGTTCGTATTTAGTATATAACTTCTCAAATTCATCCCCATACACATTATCTAACCCAG 48159 | | ||||||| | |||||||| | || ||||| || || || |||| | | || || | Sbjct 19309 CTTTTTCGTATCTGGTATATAATTCTTCGAATTCGTCACCGTAAACATCAGCCAAACCTG 19250 Query 48160 GACATTCATTAGGACACATCAATGACCAATCCTCATCATTTTTTACTCTAGTCATAAATA 48219 | ||||| || | | ||| | |||||| | | | || ||||| |||| || | Sbjct 19249 GGGCCTCATTTGGTGAGAACAAAGTCCAATCACCGTTTTGTTCGACTCTTTTCATGAACA 19190 Query 48220 TATCTGGTATCCAAAGAGCTATAAATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTAT 48279 ||||| ||||| | |||| || ||||| || | ||| | |||||| || ||| || Sbjct 19189 AGTCTGGAATCCATAAAGCTGGGAACAAATCTCTGGCTCTGATTTCTTCTTTACCATGAT 19130 Query 48280 TCCTTTTAAGTTCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAATATATTGCCA 48339 || || | | |||| || || | || ||| |||||||||||||| || | || | Sbjct 19129 TCTTTCTGATGTCAATGAAATCAAAGATGTCACTGTGCCATGGTTCTAAGTACAAGGCAA 19070 Query 48340 TTACACCTGGTCGTTTATTACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTC 48399 |||| |||| ||| ||||| |||||||| | ||| | ||||| || || | |||| Sbjct 19069 AGGCACCAGGTCTTTTGTTACCACCTTGATCAACATAACGTGCAGTGTTATTGAACACTC 19010 Query 48400 TTAACATTGGGACAATACCATTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAG 48459 ||| |||||| | ||||||||| || |||||||||| || | ||| ||| ||| ||| Sbjct 19009 TTACCATTGGAATAATACCATTAGAAGTACCATTGGTACCAGCAATGTAAGCACCAGTAG 18950 Query 48460 CTCTTATATTACTAAT-TGAAATACCTATACCACCTGCCATTTTAGATATTAGAGCACAC 48518 | || || || || || ||| || || ||||| |||| || || | ||||||| Sbjct 18949 AACGAATGTTGTGGATATGTAA-ACCAATCCCTCCTGCACTTTTTGAAATCAAAGCACAC 18891 Query 48519 CGTTTAAGGGTATCATAAATTCCTTCTATACTATCATCTATCATATTTAATAGAAAACAA 48578 ||| | |||||||| || ||||| ||| |||||| ||||| | | || || Sbjct 18890 GATTTTAAAGTATCATATATACCTTCAATAGAATCATCCTTCATAGCAAGCAAGAAGCAT 18831 Query 48579 CTAGACATTTGCGGATGACAAGTTCCTGAATTAAATAATGTTGGAGATGCATGAATAAAC 48638 |||||||||||| || || | ||| || || ||||| |||| |||| Sbjct 18830 GAAGACATTTGCGGTCTTGGTGTACCAGCATTGAACAAGCAAGGAGAACCATGGGTAAAG 18771 Query 48639 CATTTCTCTGATAACAATTTATATGTTTCAATAACAGAATCTATATCCCATT--GATGTA 48696 || | | || | ||| ||||| |||||||| || ||||| |||| || | Sbjct 18770 AATCTTTGAGACATCAAGTTATAGGTTTCAATGACTCTTGGTATAT--CATTACCGTGGA 18713 Query 48697 TACCTATAGATACACGCATTAACATATATTGAGGTCTTTCAACAATTTTGTTATTTATTT 48756 |||| | || || | ||| | || || ||| |||||||| ||| || || || Sbjct 18712 TACCAACAGCGACTCTCATGATCAAATGTTGGGGTCTTTCGGCAACCTTACCGTTGATAC 18653 Query 48757 TCAAAAGATATGATTTTTCCAATGTTTTAAAACCAAAATAGTTGTATGAAAAGTCGTTAT 48816 || | ||| ||| ||||||| ||||| || |||||||| ||||| ||| || | | Sbjct 18652 GTAACAAATAAGATCTTTCCAAAGTTTTGAACCCAAAATAATTGTAGCTAAAATCTCTGT 18593 Query 48817 CATTAATAATTGATGAATTTATTCTTTCCTTATGTTTATATACTACATCCATTACATTT- 48875 | | || ||| | || |||| | || | || || ||| || || || ||| Sbjct 18592 CGTAAACAATGGCCGAGTTTAATTCATCTTCGTG-TTCCATAATA-ATGTCATAGGTTTC 18535 Query 48876 -TTTGATATAATTG---------ATTCCTTGTAAAGAT-------CTTCTACAACATCAC 48918 || || || || | | | | | | ||| || || || ||| Sbjct 18534 CTTGGAAATCATAGGAGAGTGCAACCCGGTCTTAGGATTAATATACTCATATAA-ATCCT 18476 Query 48919 TAAATAtttt---------tt---ttGTTTCTTTATGAAGATTAGATATAGATATTCTAG 48966 || ||| ||| || | |||| || || | ||| |||| | ||||||| Sbjct 18475 TAGATACTTTGGAATACTGTTTGGTGGTTTGCTTGTGTAAATTTGATACGGCAATTCTAG 18416 Query 48967 CAGCTAATATAGCATAATCTGGATGAATTGTTGTACATGTACTAGATATTTCTGCTGCTA 49026 | ||||| | ||||||||| |||||||||||||| |||| || |||||||| || | Sbjct 18415 CGGCTAACACAGCATAATCAGGATGAATTGTTGTCATTGTAGCAGCAATTTCTGCAGCCA 18356 Query 49027 ATATATCTAATTCTTTAGTAGTTACACCTGTATATATTCCTTGAATAACTTTCATTGCTA 49086 | |||| || || ||||||| || || || | ||| |||||||| | | Sbjct 18355 AGTTATCCAACTCGATAGTAGTAACCCCCTGGTAAACACCTGATATAACTTTTTGGGTAA 18296 Query 49087 TATTTACTGGATCTATATGATCCATATCCAGTCCATAACATAAtttttttATTCTAGATG 49146 || ||||| || | |||| || | || ||||||||| ||| | ||||| | Sbjct 18295 TAGCAACTGGTTCAACGTGATTTGGATTTAAACCGTAACATAATCTTTGAACTCTAGCGG 18236 Query 49147 TAATTTTATCAAACATTATATTCTCTTTACGACCGTCACGTTTTAT-AACAAACAT 49201 | ||||| ||||| || ||||||||| || || | | |||| |||| |||| Sbjct 18235 TGATTTTGTCAAAACGTACTGGCTCTTTACGGCCATCTC-TCTTATAAACATACAT 18181 >seq22 Length=82586 Score = 284 bits (314), Expect = 1e-71 Identities = 600/889 (67%), Gaps = 11/889 (1%) Strand=Plus/Minus Query 18657 CATTACTCCCATTTTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTC 18716 |||||| || ||||| || || | |||||| |||||||||||||||||||| || | Sbjct 9515 CATTACACCGGCCTTTTGGTAATCAGAAACTCTCTTTTCAAAGAAATTAGTTTTACCAGC 9456 Query 18717 TAATGATATACATTCCATAAAATCAAATGGATTTTTTACATTATATAtttttttGAATCC 18776 ||||| ||| ||||||||||||||||||||| | ||||| || ||||| ||| Sbjct 9455 CAATGAGATATTTTCCATAAAATCAAATGGATTAGTAACATTGTAATACTTTTTATTTCC 9396 Query 18777 TAATTCTAATAGTAGTCTATCCGCTACAAATTTAATATATGTGTTCATCATATCACAATT 18836 || | | || || || ||| || ||||||| || ||| | ||||| |||||||| Sbjct 9395 AAAGGCCACTAATAATCGATCAGCAACAAATTCAACATACTGGCACATCAAGTCACAATT 9336 Query 18837 CATTCCTATTAATTTAACAGGTAGTGCATCTGTAAGAAATTCTTGTTCTATATTTACTGC 18896 |||||| | ||| || || || ||||| | | | ||| || || ||| | || || Sbjct 9335 CATTCCCAATAAAGATACTGGAAGCGCATCGCTGAAATATTTTTTCTCAATAGTCACAGC 9276 Query 18897 CTCTGATATAATAGATACAACTCTATCTTCATTAGG---AGGGTATAGAAGATGTTTAAA 18953 ||| | || || ||| | ||| | ||| | | || || | | || Sbjct 9275 CTCGGTAATGATTTTCTCAATGATTTCTGGAGAAGGTTTATTCTTTA-AATACGAG--AA 9219 Query 18954 CATCAAACATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAA 19013 | |||||| ||| |||| || | || ||||||| | ||||||||||| ||||| Sbjct 9218 TAACAAACAGGCATAATCCGTGTGAATCCCTTCGTCTCGGCAAATCAATTCATTCGAAAA 9159 Query 19014 TGTTAAACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGA 19073 ||| || || ||||||| || ||||| ||||||||||| || | ||||| || ||| Sbjct 9158 TGTCAATCCTGGCATCAACCCCCTTTTCTTTAACCAGAAAATTGCTGCAAACGAACCACT 9099 Query 19074 AAAGAATATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATT 19133 || ||||||||||| || || ||||| ||||| | ||| || |||| |||||| | Sbjct 9098 GAAAAATATACCTTCAACGGCAGCAAACGCAACCAATCTCTCAGCATACAAAGCATCCTC 9039 Query 19134 ATTATGAATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTAT 19193 | |||||||| | | |||||||| || || | | | | |||| || | || || Sbjct 9038 GTCTTGAATCCACCTGATGGCCCAATCGGCTTTTTCTCTGATGAATGGGATATTTTCAAT 8979 Query 19194 AGAATTAAATAGATACATACGC-TCATCTGTATCTTTAACATATGCATCTATCAATAAAC 19252 || |||||| | | | | ||| || |||| || || | |||| || || || || Sbjct 8978 AGCATTAAACA-AAAAGTCCGCTTCTTCTGGGTCCTTGAAGTATGTTTCGATTAACAACG 8920 Query 19253 TGTACATTTCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTT 19312 || | |||||||| || ||||| || |||||||| ||| | | || | Sbjct 8919 AATAAGTCTCTGAATGGATGTTTTCCATCATGATCTGAAACTTGTATACCAGTTGAGCCT 8860 Query 19313 CTGTTATCTGTACTTCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCAC 19372 ||| ||| ||||||||| ||| || |||| ||||| || ||||| || || ||||| Sbjct 8859 CTGGTATTTGTACTTCAGCACAGAAATTTTCCACCAAGTTCTCATTGACAATACCATCCG 8800 Query 19373 TAGCTGCAAAAAATGCTAATACATGTTTAATAAAATGTTTTTCATCTGAGGTTAATGTA- 19431 || ||||| ||||| || || | || ||| | |||||| | | | | | || Sbjct 8799 AGGCAGCAAAGAATGCCAACACTCGGGAGATGAAAAATCTTTCATTTTCGTTCATTTTAT 8740 Query 19432 --TTCCAATCATTAATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCT 19489 ||||| || | ||||||| ||| || | |||||| |||||||||| || ||| Sbjct 8739 TGTTCCAGTCGGCCAAATCTTTACTTAAGTCAAGCTCTTCAGCTGTCCAAAACGAGGCCA 8680 Query 19490 CTGCTTTTTTATACATGTTCCATATATCACGATATTGTATAGGAAATAT 19538 | ||||| || | | ||||| || |||| | |||||| |||| Sbjct 8679 ACGACTTTTTGTAGAATTGCCATAACTCCGGATACTTAATAGGATATAT 8631 >seq30 Length=68702 Score = 250 bits (276), Expect = 3e-61 Identities = 480/697 (69%), Gaps = 8/697 (1%) Strand=Plus/Minus Query 48104 TTCGTATTTAGTATATAACTTCTCAAATTCATCCCCATACACATTATCTAACCCAGGACA 48163 ||| ||||| |||||| || |||||||| || |||||||| | | || ||| || Sbjct 1527 TTCATATTTGCAATATAATTTTTCAAATTCCTCACCATACACGTCACTTAGACCAAGAGC 1468 Query 48164 TTCATTAGGACACATCAATGACCAATCCTCATCATTTTTTACTCTAGTCATAAATATATC 48223 |||||| || | | ||| | ||| || || | ||| || | ||||||| | || Sbjct 1467 TTCATTGGGCGAAAACAAAGTCCAGTCAGAATTGTCTTTCACACGTTTCATAAACAAGTC 1408 Query 48224 TGGTATCCAAAGAGCTATAAAT-AAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCC 48282 |||||||| | | | ||||| ||||| |||||||| | ||||||||| || ||| Sbjct 1407 GGGTATCCATA-ATCCATAAAACAAATCTCTAGTTCTCATTTCTTCATTCCCGTGATTTT 1349 Query 48283 TTTTAAGTTC-AAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAATATATTGCCATT 48341 || | | ||| |||| | || | |||||| ||||||||||||||| |||||| || | | Sbjct 1348 TTCTCATTTCTAAGATA-TCAAAAATATCACCATGCCATGGTTCTATATATATGGCAAAT 1290 Query 48342 ACACCTGGTCGTTTATTACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTT 48401 | ||||| |||||| || |||||||| | |||||| |||||||| || ||||| | Sbjct 1289 GCTCCTGGACGTTTACCCCCACCTTGATCGACATATCTTGCAGTATTATTGTAAACACGC 1230 Query 48402 AACATTGGGACAATACCATTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCT 48461 ||||| || || | || ||||| |||||||||| || | |||||| ||| | | | Sbjct 1229 AACATGGGTACTAACCCGTTTGAACTACCATTGGTGCCAGCAATATACGCACCATTGGAT 1170 Query 48462 CTTATATTACTAATTGAAATACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGT 48521 || ||||| | ||||||||| || |||| || || |||||||| | Sbjct 1169 CTAATATTGTGCACATGAATACCTATTCCTCCTGATGCCTTGGAAATTAGAGCCGCCTCA 1110 Query 48522 TTAAGGGTATCATAAATTCCTTCTATACTATCATCTATCATATTTAATAGAAAACAACTA 48581 ||||| || | | || || || || ||| ||| |||| || ||| ||||| Sbjct 1109 TTAAGAGTCTTGAATATCCCATCGATTGAATCTTCTTTCATGGCTACTAGGAAACATGAT 1050 Query 48582 GA-CATTTGCGGATGACAAGTTCCTGAATTAAATAATGTTGG-AGATGCATGAATAAACC 48639 || | | | || | | | || | |||| ||||||| || ||| ||||||||||| Sbjct 1049 GATAAATAGTTGAATTC-ACTACCAGCATTATATAATGTAGGCAGA-GCATGAATAAAGT 992 Query 48640 ATTTCTCTGATAACAATTTATATGTTTCAATAACAGAATCTATATCCCATTGATGTATAC 48699 | |||| || | || | ||||||||| | || | || | ||| || || || | Sbjct 991 ACTTCTGGGACATTAAGTCATATGTTTCCACAATGGCATTCAAATCGTTCTGGTGAATTC 932 Query 48700 CTATAGATACACGCATTAACATATATTGAGGTCTTTCAACAATTTTGTTATTTATTTTCA 48759 |||| | ||||||||| || | ||| || || |||| ||| || | ||||| | Sbjct 931 CTATGGCTACACGCATGAATAAATACTGGGGCAATTCAGCAACTTCACCACCCATTTTTA 872 Query 48760 AAAGATATGATTTTTCCAATGTTTTAAAACCAAAATA 48796 |||| ||||| ||||||||||||||| |||||||| Sbjct 871 AAAGGTATGAGCTTTCCAATGTTTTAATCCCAAAATA 835 Score = 138 bits (152), Expect = 1e-27 Identities = 325/480 (68%), Gaps = 23/480 (5%) Strand=Plus/Minus Query 47004 GCTGATTTTGTTCGTAAATAATACATACCAGTCTTTAAACCTAAACTCCATCCATAGAAA 47063 |||| || |||||||| ||||||||||||||| || || || ||| |||| || Sbjct 2639 GCTGCTTGTGTTCGTAGATAATACATACCAGTTTTCAACCCCTTTTCCCAAGCATAAAAG 2580 Query 47064 TGCATACTAGTTAATTTAGAATAACTAGG-TTCTGAAATATGAATATTAAGAGATTGACT 47122 || ||||||||| || | |||| || | || || ||||| | | ||| Sbjct 2579 TGACAACTAGTTAACTTGCCAATTGTAGGATTACGCAA-GTGTATATTCATACTTTGCAG 2521 Query 47123 CTGATCAATAAATGCACCTCTATCAGCTGCCATATCTAAAATAACCCTTTGTGGTATCTC 47182 ||||||| |||| |||||||| || |||||||| | || || |||||| | || Sbjct 2520 TTGATCAACAAATTTTCCTCTATCTGCAGCCATATCAATGATCACTTTTTGTGACAATTC 2461 Query 47183 CCATACTGTTTTATAAATTTGTTTAATGTCTTCTGGGAGATTAG---TATTTTGAATAGA 47239 ||| || |||||||| | |||||| || || || || | ||| | | |||||||| || Sbjct 2460 CCACACGGTTTTATATAATTGTTTGATTTCGTCAGGTATATTGGGTATTTTTTGAATTGA 2401 Query 47240 TCCTCCgttttctataattttgttttttaattcat--ttga---ccaaagttttcg-ttc 47293 ||| ||||| ||||| | || ||| |||| ||| ||||| | | | | Sbjct 2400 ---TCCATTTTCCATAATAATCTTATTT--CTCATAGCTGAATCCCAAATTCCAAGATCC 2346 Query 47294 agttaatgttt--ttaaA-AGATGAGGATTAACAATTTGAAATTCTCCAGATAGTACTCT 47350 | | ||| ||| ||||| | || || ||||||||| ||||||| | || |||| Sbjct 2345 ATTAAATCTTTAATTAAATACTTG----TTGACAATTTGATATTCTCCCGCTAACACTCG 2290 Query 47351 ACGGCTATATATATTACTTGTATATGGTTCTATAGATTCATTATTTCCAAAAATTTGAGC 47410 ||| |||| | || ||||| || || | ||||||| ||||| |||||| | Sbjct 2289 ACGATTATACAAGTTTGAAGTATAAGGCTCAAAGCATTCATTGAATCCAAGAATTTGGGA 2230 Query 47411 AGTTGATGCTGTAGGCATGGATGCAACTAATAAGCTATTTCTTACTCCATATTTTTGTAT 47470 ||||||||| || ||||| | || |||| ||| ||||||| ||| | ||||| || Sbjct 2229 AGTTGATGCCGTCGGCATCGGAGCTACTAGTAATGAGTTTCTTAAACCAAAATTTTGAAT 2170 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562103333491920