Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20dubliniensis_20[genbank_20GCA_5F000647555.1_202014-04-23] 778 sequences; 14,044,856 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq241 250 3e-61 seq22 170 2e-37 >seq241 Length=19529 Score = 250 bits (276), Expect = 3e-61 Identities = 562/838 (67%), Gaps = 21/838 (3%) Strand=Plus/Plus Query 36872 CATAACTCCCATTTTTTGATATTCTCCAACTCGTCTTTCGAAAAAATTTGTCTTTCCTTC 36931 |||||| || |||||| || ||| ||||| | |||| || ||||| ||||| || | Sbjct 8906 CATAACACCAGCTTTTTGGTAGTCTGAAACTCTTTTTTCAAAGAAATTGGTCTTACCAGC 8965 Query 36932 TAGTGATATATTTTCCATAAAATCAAATGGATTAGATGTATTATATA---TAGTACTACA 36988 | || || |||||||| |||||||||||||||| ||| |||| | | ||| Sbjct 8966 CAAAGAAATGTTTTCCATGAAATCAAATGGATTAGTAACATTGTATACTTTCTTGTTACC 9025 Query 36989 TGATAATTCCTTCAGAAGCCTATCCGCAACAAATTCTATGTATTTACACATTAGTTCATA 37048 | || || || | ||||| || || ||||| ||||||| |||||| | | | | Sbjct 9026 T---AAGGCCAACAACAATCTATCAGCGACGAATTCAATGTATTGACACATCAAGTTACA 9082 Query 37049 GTTTATACCAATTAGTTTTACTGGAATTGCATCTTGAAGAAATAGTTTTTCT-ATTATTA 37107 ||| ||||| | | ||||||| ||||| || | || | ||||| | || | Sbjct 9083 GTTCATACCCAACAAGGACACTGGAAGAGCATCGGTAA--AGTACTCTTTCTCAACATCA 9140 Query 37108 -CAGCATCTTTAACTATATTAACAATAACTTCTTCAGTTGGGGGATATTTTAAATATTTA 37166 |||| || ||| || || ||| || ||| || ||| | || |||| | Sbjct 9141 ACAGCTTCAGTAATAATTTTTTCAACAATCTCTGGAGATGGTCTGTTTTGCAAATGAGCA 9200 Query 37167 AACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAA 37226 ||||||||||| ||||| ||| ||||||||||||||||| | ||||| || || || Sbjct 9201 AACAATAAACAAGCAAAGTCAGTGTGTAAACCTTCATCTCTGCAAATCAACTCGTTTGAG 9260 Query 37227 AAGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCA 37286 || || || ||||||||||||||||| ||||| | ||| || || | ||||| || ||| Sbjct 9261 AAAGTCAACCCTGGCATTAAACCTCTCTTTTTCAACCAGAAGATAGAAGCAAATGAACCA 9320 Query 37287 GAAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTA 37346 ||||||||||||||||||||| ||||| || || | | | ||| | | | Sbjct 9321 CTAAAGAAAATACCTTCAACTGCAGCAAAGGCAACTAATCTTTCACCATACAAGGCTTCA 9380 Query 37347 TAATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCA 37406 | ||| ||||||||| | | ||| || || || || || |||| ||| | || Sbjct 9381 TCATCTTGAATCCATTTGATAGCCCAGTCAGCTTTCTTTTGAATACATGGAATATTGGCA 9440 Query 37407 ATTGCTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAA 37466 || || || || | | | ||||| | |||| |||| ||||| ||||||| |||| Sbjct 9441 ATGGCATTAAATAAGTAATCGGCTTCTTGAGGATCTTTTATGTAAGTTTCAATTAATAAA 9500 Query 37467 CTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCT 37526 || |||| || ||||| ||||| || || || ||||| || || | | ||| Sbjct 9501 GAGTAGGTTTCTGAATGAATGTTTTCCATCATGATTTGGAAACCGTAGAATGATTTGGCT 9560 Query 37527 TCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCA 37586 || | | |||||| || | | || | | | |||||||||| ||| || |||||| Sbjct 9561 TCGGGAAGTTGAACTTCAGTCGAGAAGTTTTCAATTAAGTTTTCACCAACAATACCATCA 9620 Query 37587 CTAGCTGCAAAGAAAGCAAGAACATATTTT----ATAAAATGTCTTTCA---TCATTTGA 37639 ||| || || || || | ||| | | | ||||| ||||||| ||||| | Sbjct 9621 GAAGCAGCGAAAAATGCCA----ATACTCTAGAGACAAAATATCTTTCATTTTCATTCAA 9676 Query 37640 TAATTTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAAA 37697 | || ||||| |||| | |||||| ||||| | ||| || ||||||| ||| Sbjct 9677 TTTGTTATTCCAGTCATCCAAATCTTTACTCAAATCGATTTCTTCGGCGGTCCAGAAA 9734 >seq22 Length=82586 Score = 170 bits (188), Expect = 2e-37 Identities = 308/447 (69%), Gaps = 20/447 (4%) Strand=Plus/Minus Query 36885 TTTTGATATTCTCCAACTCGTCTTTCGAAAAAATTTGTCTTTCCTTCTAGTGATATATTT 36944 ||||| || || ||||| |||| || ||||| || || || | | ||| |||||| Sbjct 9502 TTTTGGTAATCAGAAACTCTCTTTTCAAAGAAATTAGTTTTACCAGCCAATGAGATATTT 9443 Query 36945 TCCATAAAATCAAATGGATTAGATGTATTATATATAGTACTACATGATAATTCCT----- 36999 |||||||||||||||||||||| || | || ||| ||| | || |||| Sbjct 9442 TCCATAAAATCAAATGGATTAG------TA-ACATTGTAATACTTTTTATTTCCAAAGGC 9390 Query 37000 ---TCAGAAGCCTATCCGCAACAAATTCTATGTATTTACACATTAGTTCATAGTTTATAC 37056 | | || | ||| ||||||||||| | || | ||||| | ||| | || || | Sbjct 9389 CACTAATAATCG-ATCAGCAACAAATTCAACATACTGGCACATCAAGTCACAATTCATTC 9331 Query 37057 CAATTAGTTTTACTGGAATTGCATCTTGAAGAAATAGTTTTTCT--ATTATTACAGCATC 37114 | | || |||||||| ||||| | |||||| ||||||| || | ||||| || Sbjct 9330 CCAATAAAGATACTGGAAGCGCATC--GCTGAAATATTTTTTCTCAATAGTCACAGCCTC 9273 Query 37115 TTTAACTATATTAACAATAACTTCTTCAGTTGGGGGATATTTTAAATATTTAAACAATAA 37174 ||| || || |||| | |||| || || || |||||||| || || || Sbjct 9272 GGTAATGATTTTCTCAATGATTTCTGGAGAAGGTTTATTCTTTAAATACGAGAATAACAA 9213 Query 37175 ACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAA 37234 ||| ||| |||| || | ||||| |||| | ||||||||||| ||||| || || Sbjct 9212 ACAGGCATAATCCGTGTGAATCCCTTCGTCTCGGCAAATCAATTCATTCGAAAATGTCAA 9153 Query 37235 TCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAA 37294 ||||||||| || || ||||| || | ||| || ||||||||||| || ||| || || Sbjct 9152 TCCTGGCATCAACCCCCTTTTCTTTAACCAGAAAATTGCTGCAAACGAACCACTGAAAAA 9093 Query 37295 AATACCTTCAACTGCTGCAAATGCTAC 37321 ||||||||||| || ||||| || || Sbjct 9092 TATACCTTCAACGGCAGCAAACGCAAC 9066 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592311039719120