Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20dubliniensis_20[genbank_20GCA_5F000647555.1_202014-04-23]
778 sequences; 14,044,856 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq30 197 7e-46
seq65 183 2e-41
>seq30
Length=68702
Score = 197 bits (218), Expect = 7e-46
Identities = 213/282 (76%), Gaps = 0/282 (0%)
Strand=Plus/Minus
Query 25933 CATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTT 25992
|||||| || || || ||||| | | ||||||| |||||||| | |||||||||||| ||
Sbjct 1419 CATAAACAAGTCGGGTATCCATAATCCATAAAACAAATCTCTAGTTCTCATTTCTTCATT 1360
Query 25993 TCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATA 26052
|||||||| ||| | | ||||||| |||||||||||| ||||||||||||| |||
Sbjct 1359 CCCGTGATTTTTTCTCATTTCTAAGATATCAAAAATATCACCATGCCATGGTTCTATATA 1300
Query 26053 GATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATT 26112
|| ||||| ||| | ||| || ||||||||||| || ||||||||||| | |||
Sbjct 1299 TATGGCAAATGCTCCTGGACGTTTACCCCCACCTTGATCGACATATCTTGCAGTATTATT 1240
Query 26113 GAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGA 26172
| |||| |||||| || ||||| || ||||| || || |||| | ||| | |
Sbjct 1239 GTAAACACGCAACATGGGTACTAACCCGTTTGAACTACCATTGGTGCCAGCAATATACGC 1180
Query 26173 TCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACC 26214
|| | |||||||||| ||| |||||||||| ||||| ||
Sbjct 1179 ACCATTGGATCTAATATTGTGCACATGAATACCTATTCCTCC 1138
>seq65
Length=45114
Score = 183 bits (202), Expect = 2e-41
Identities = 300/428 (70%), Gaps = 6/428 (1%)
Strand=Plus/Minus
Query 25888 ATTTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGG 25947
|||||| |||| ||| ||||||| | ||||| || ||| | | ||| || || |||||
Sbjct 19242 ATTTGGTGAGAACAAAGTCCAATCACCGTTTTGTTCGACTCTTTTCATGAACAAGTCTGG 19183
Query 25948 AATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTT 26007
|||||| | || || |||||||| ||||| ||||||||||| || ||||||||| |
Sbjct 19182 AATCCATAAAGCTGGGAACAAATCTCTGGCTCTGATTTCTTCTTTACCATGATTCTTTCT 19123
Query 26008 TAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACC 26067
| || | ||||||||| || || ||||||||||||||| || | ||||| |||
Sbjct 19122 GATGTCAATGAAATCAAAGATGTCACTGTGCCATGGTTCTAAGTACAAGGCAAAGGCACC 19063
Query 26068 TTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACAT 26127
|||||| ||||||||||| || || | |||||| | |||||| ||| | | |||
Sbjct 19062 AGGTCTTTTGTTACCACCTTGATCAACATAACGTGCAGTGTTATTGAACACTCTTACCAT 19003
Query 26128 TGGAACTAAT-CCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAA 26186
||||| |||| ||| | ||| || || || | | ||| | | || || || | ||
Sbjct 19002 TGGAA-TAATACCATTAGAAGTACCATTGGTACCAGCAATGTAAGCACCAGTAGAACGAA 18944
Query 26187 TATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACA--ATCTGA 26244
| | ||| ||| | ||| || || || || | ||||||||| ||||| || | |
Sbjct 18943 TGTTGTGGATATGTAAACCAATCCCTCCTGCACTTTTTGAAATCAAAGCACACGATTTTA 18884
Query 26245 AACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGA 26304
|| ||||| | || |||| || |||| | ||||| | | || || || |||||
Sbjct 18883 AA--GTATCATATATACCTTCAATAGAATCATCCTTCATAGCAAGCAAGAAGCATGAAGA 18826
Query 26305 TAATTGCG 26312
| |||||
Sbjct 18825 CATTTGCG 18818
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 253037600706350
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |