Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20dubliniensis_20[genbank_20GCA_5F000647555.1_202014-04-23]
778 sequences; 14,044,856 total letters
Query= NC_021901.1
Length=197693
Score E
Sequences producing significant alignments: (Bits) Value
seq78 109 7e-19
seq34 89.7 7e-13
>seq78
Length=41181
Score = 109 bits (120), Expect = 7e-19
Identities = 234/350 (67%), Gaps = 0/350 (0%)
Strand=Plus/Plus
Query 172401 GAACTTTTATGGGTTATTAAAGGTTCAACTGATTCAAAACAATTAAATGATATAGGTGTT 172460
||| | |||||| || || || || |||||| | ||| ||||| || | || ||
Sbjct 31398 GAATTATTATGGTTTGTTGCTGGGTCTACTGATGCTAAAATATTAAGCGAAAAGGGAGTG 31457
Query 172461 AAAGTTTGGAATGATAATGGTTCTCGTGAATTTTTAGATTTATGCGGGTTTACTGAAAGA 172520
||| | ||| | | ||||| |||||||| |||||||| || || || ||| | |
Sbjct 31458 AAAATCTGGGAAGGCAATGGATCTCGTGAGTTTTTAGACAAATTAGGATTGACTCATCGT 31517
Query 172521 AAAGAAGGTGATTTAGGCCCAATTTATGGATTTCAATGGAGACATGCAGGGGCTCAATAT 172580
||||| ||||| || ||| ||||||| || |||||||||||| || || |||||
Sbjct 31518 CGTGAAGGGGATTTGGGACCAGTTTATGGTTTCCAATGGAGACATTTTGGTGCAGAATAT 31577
Query 172581 ATCGACTGTGATACAGATTACACAGGACAAGGAGTGGACCAATTAAGTCAAACTATTAAT 172640
| || |||||| | ||||| | || |||||| | || || ||| | ||||||
Sbjct 31578 AAAGATTGTGATTCTGATTATAGTGGCCAAGGATTTGATCAGTTACAAGATGTTATTAAA 31637
Query 172641 ACTTTACAAAACAACCCAGAAAGTAGAAGGATGTTAATTGATAGTTGGAATGTACCTCAA 172700
| || ||| || || | |||||| || | || | ||||||| ||| |
Sbjct 31638 AAATTGAAAACAAATCCTTATGATAGAAGAATTATCATGTCTGCTTGGAATCCACCAGAT 31697
Query 172701 CTTGATAAAATGGTTCTTCCTCCTTGCCATACTTTAGCACAATTTTATGT 172750
||| |||||||| | ||||| || ||| || |||||||||||
Sbjct 31698 TTTGCTAAAATGGCATTACCTCCATGTCATGTATTTTGTCAATTTTATGT 31747
>seq34
Length=64929
Score = 89.7 bits (98), Expect = 7e-13
Identities = 105/142 (74%), Gaps = 0/142 (0%)
Strand=Plus/Plus
Query 194246 AAATAGGGGATAAATTTTGTTCGGGAATGGCTCAAAAAGGAACTTGTGGTATGATTTATT 194305
|||| |||||||| ||| ||| || | ||||||||| ||| |||| ||| |||
Sbjct 25202 AAATTGGGGATAAGTTTGCCTCGAGACACGGTCAAAAAGGTACTATTGGTGTGACATATA 25261
Query 194306 CACAAGAAGATATGCCATTTACAACTTCAGGTATGGTACCAGATATTATTATCAATCCAA 194365
||| ||||||||||| |||||| | |||||| || |||||| | |||||||| ||
Sbjct 25262 GACATGAAGATATGCCTTTTACAGCCGAAGGTATTGTTCCAGATTTAATTATCAACCCTC 25321
Query 194366 ATTGTATTCCGTCCAGAATGAC 194387
|| |||||| || | |||||
Sbjct 25322 ATGCTATTCCATCTCGTATGAC 25343
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 632483449038640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |