Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20dubliniensis_20[genbank_20GCA_5F000647555.1_202014-04-23] 778 sequences; 14,044,856 total letters Query= NC_021901.1 Length=197693 Score E Sequences producing significant alignments: (Bits) Value seq78 109 7e-19 seq34 89.7 7e-13 >seq78 Length=41181 Score = 109 bits (120), Expect = 7e-19 Identities = 234/350 (67%), Gaps = 0/350 (0%) Strand=Plus/Plus Query 172401 GAACTTTTATGGGTTATTAAAGGTTCAACTGATTCAAAACAATTAAATGATATAGGTGTT 172460 ||| | |||||| || || || || |||||| | ||| ||||| || | || || Sbjct 31398 GAATTATTATGGTTTGTTGCTGGGTCTACTGATGCTAAAATATTAAGCGAAAAGGGAGTG 31457 Query 172461 AAAGTTTGGAATGATAATGGTTCTCGTGAATTTTTAGATTTATGCGGGTTTACTGAAAGA 172520 ||| | ||| | | ||||| |||||||| |||||||| || || || ||| | | Sbjct 31458 AAAATCTGGGAAGGCAATGGATCTCGTGAGTTTTTAGACAAATTAGGATTGACTCATCGT 31517 Query 172521 AAAGAAGGTGATTTAGGCCCAATTTATGGATTTCAATGGAGACATGCAGGGGCTCAATAT 172580 ||||| ||||| || ||| ||||||| || |||||||||||| || || ||||| Sbjct 31518 CGTGAAGGGGATTTGGGACCAGTTTATGGTTTCCAATGGAGACATTTTGGTGCAGAATAT 31577 Query 172581 ATCGACTGTGATACAGATTACACAGGACAAGGAGTGGACCAATTAAGTCAAACTATTAAT 172640 | || |||||| | ||||| | || |||||| | || || ||| | |||||| Sbjct 31578 AAAGATTGTGATTCTGATTATAGTGGCCAAGGATTTGATCAGTTACAAGATGTTATTAAA 31637 Query 172641 ACTTTACAAAACAACCCAGAAAGTAGAAGGATGTTAATTGATAGTTGGAATGTACCTCAA 172700 | || ||| || || | |||||| || | || | ||||||| ||| | Sbjct 31638 AAATTGAAAACAAATCCTTATGATAGAAGAATTATCATGTCTGCTTGGAATCCACCAGAT 31697 Query 172701 CTTGATAAAATGGTTCTTCCTCCTTGCCATACTTTAGCACAATTTTATGT 172750 ||| |||||||| | ||||| || ||| || ||||||||||| Sbjct 31698 TTTGCTAAAATGGCATTACCTCCATGTCATGTATTTTGTCAATTTTATGT 31747 >seq34 Length=64929 Score = 89.7 bits (98), Expect = 7e-13 Identities = 105/142 (74%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 194246 AAATAGGGGATAAATTTTGTTCGGGAATGGCTCAAAAAGGAACTTGTGGTATGATTTATT 194305 |||| |||||||| ||| ||| || | ||||||||| ||| |||| ||| ||| Sbjct 25202 AAATTGGGGATAAGTTTGCCTCGAGACACGGTCAAAAAGGTACTATTGGTGTGACATATA 25261 Query 194306 CACAAGAAGATATGCCATTTACAACTTCAGGTATGGTACCAGATATTATTATCAATCCAA 194365 ||| ||||||||||| |||||| | |||||| || |||||| | |||||||| || Sbjct 25262 GACATGAAGATATGCCTTTTACAGCCGAAGGTATTGTTCCAGATTTAATTATCAACCCTC 25321 Query 194366 ATTGTATTCCGTCCAGAATGAC 194387 || |||||| || | ||||| Sbjct 25322 ATGCTATTCCATCTCGTATGAC 25343 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 632483449038640