Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20dubliniensis_20[genbank_20GCA_5F000647555.1_202014-04-23] 778 sequences; 14,044,856 total letters Query= NC_023611.1 Length=198533 Score E Sequences producing significant alignments: (Bits) Value seq78 105 8e-18 seq34 86.0 8e-12 >seq78 Length=41181 Score = 105 bits (116), Expect = 8e-18 Identities = 241/360 (67%), Gaps = 2/360 (1%) Strand=Plus/Plus Query 168519 ATTCTTAAAGAACTTTTATGGGTTATAAAAGGTTCAACTGATTCAAAACAATTAAATGAT 168578 ||| || | ||| | |||||| || | || || |||||| | ||| ||||| || Sbjct 31389 ATTATTCATGAATTATTATGGTTTGTTGCTGGGTCTACTGATGCTAAAATATTAAGCGAA 31448 Query 168579 ATAGGTGTTAAAGTTTGGAACGATAATGGTTCTCGTGAATTTTTAGATTTATGTGGTTTT 168638 | || || ||| | ||| | | ||||| |||||||| |||||||| || || || Sbjct 31449 AAGGGAGTGAAAATCTGGGAAGGCAATGGATCTCGTGAGTTTTTAGACAAATTAGGATTG 31508 Query 168639 ACCGAAAGAAAAGAAGGTGATTTAGGTCCAATTTATGGATTTCAATGGAGACATGCAGGA 168698 || | | ||||| ||||| || ||| ||||||| || |||||||||||| || Sbjct 31509 ACTCATCGTCGTGAAGGGGATTTGGGACCAGTTTATGGTTTCCAATGGAGACATTTTGGT 31568 Query 168699 GCTCAATATATTGACTGTGATACAGATTACACCGGACAAGGAGTAGACCAATTAAGTCAA 168758 || |||||| || |||||| | ||||| | || |||||| | || || ||| | Sbjct 31569 GCAGAATATAAAGATTGTGATTCTGATTATAGTGGCCAAGGATTTGATCAGTTACAAGAT 31628 Query 168759 ACTATAAATACTTTACACAACAATCCGGAAAATAGAAGAATATTAATTAATAGTTGGGAT 168818 ||| || | || | | ||||| | |||||||||| | || | |||| || Sbjct 31629 GTTATTAAAAAATTGAAAACAAATCCTTATGATAGAAGAATTATCATGTCTGCTTGGAAT 31688 Query 168819 GTACCACAACTTGATAAAATGGTTCTTCCCCCTTGTCA-CACTTTAGTGCAATTTTATGT 168877 |||| | ||| |||||||| | || || ||||| ||| || ||||||||||| Sbjct 31689 CCACCAGATTTTGCTAAAATGGCATTACCTCCATGTCATGTATTTTGT-CAATTTTATGT 31747 >seq34 Length=64929 Score = 86.0 bits (94), Expect = 8e-12 Identities = 104/142 (73%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 193450 AAATAGGGGATAAATTTTGTTCAGGAATGGCCCAAAAAGGAACTTGTGGTATGATTTATT 193509 |||| |||||||| ||| || || | |||||||| ||| |||| ||| ||| Sbjct 25202 AAATTGGGGATAAGTTTGCCTCGAGACACGGTCAAAAAGGTACTATTGGTGTGACATATA 25261 Query 193510 CACAAGAAGATATGCCATTTACAGCTTCAGGTATGGTACCAGATATTATTATTAATCCAA 193569 ||| ||||||||||| |||||||| |||||| || |||||| | ||||| || || Sbjct 25262 GACATGAAGATATGCCTTTTACAGCCGAAGGTATTGTTCCAGATTTAATTATCAACCCTC 25321 Query 193570 ATTGTATTCCATCCAGAATGAC 193591 || ||||||||| | ||||| Sbjct 25322 ATGCTATTCCATCTCGTATGAC 25343 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635171422897840