Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20dubliniensis_20[genbank_20GCA_5F000647555.1_202014-04-23]
778 sequences; 14,044,856 total letters
Query= NC_023613.1
Length=204815
Score E
Sequences producing significant alignments: (Bits) Value
seq78 98.7 1e-15
>seq78
Length=41181
Score = 98.7 bits (108), Expect = 1e-15
Identities = 242/363 (67%), Gaps = 8/363 (2%)
Strand=Plus/Plus
Query 180419 ATTCTTAAAGAATTATTATGGATAATGAAAGGTTTAACAAATTCTAATTTGTTAAATGAT 180478
||| || | |||||||||||| | | || | || || |||| | |||| ||
Sbjct 31389 ATTATTCATGAATTATTATGGTTTGTTGCTGGGTCTACTGATGCTAAAATATTAAGCGAA 31448
Query 180479 ATTGGTGTTAAAGTGTGGAATGATAATGGTTCGCGTAAGTTTTTAGATTCTTGTGGATT- 180537
| || || ||| | ||| | | ||||| || ||| |||||||||| | |||||
Sbjct 31449 AAGGGAGTGAAAATCTGGGAAGGCAATGGATCTCGTGAGTTTTTAGACAAATTAGGATTG 31508
Query 180538 --TCATTTTCGAAAAGAAGGTGATTTAGGACCAATTTATGGATTTCAATGGAGACATGCA 180595
|||| ||| ||||| ||||| |||||| ||||||| || ||||||||||||
Sbjct 31509 ACTCATCGTCGT---GAAGGGGATTTGGGACCAGTTTATGGTTTCCAATGGAGACATTTT 31565
Query 180596 GGAGCTCAATATATTGACTGTGATACCAACTATATCGGGCAAGGTATAGACCAATTAAGC 180655
|| || |||||| || |||||| | | |||| || ||||| | || || |||
Sbjct 31566 GGTGCAGAATATAAAGATTGTGATTCTGATTATAGTGGCCAAGGATTTGATCAGTTACAA 31625
Query 180656 CAAGTTATAGAAACTATAAAAAATAATCCCGAATGCCGAAGAATAATCATAGATAGTTGG 180715
| ||||| ||| | |||| ||||| | ||||||| ||||| | ||||
Sbjct 31626 GATGTTATTAAAAAATTGAAAACAAATCCTTATGATAGAAGAATTATCATGTCTGCTTGG 31685
Query 180716 AATGTATCACAATTACCAGATATGGCTCTTCCACCATGTCA-CTGTTTGGTACAATTTTA 180774
||| | || | || | | ||||| | || |||||||| | ||| || ||||||||
Sbjct 31686 AATCCACCAGATTTTGCTAAAATGGCATTACCTCCATGTCATGTATTTTGT-CAATTTTA 31744
Query 180775 TGT 180777
|||
Sbjct 31745 TGT 31747
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 655273627402000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |