Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20dubliniensis_20[genbank_20GCA_5F000647555.1_202014-04-23] 778 sequences; 14,044,856 total letters Query= NC_023613.1 Length=204815 Score E Sequences producing significant alignments: (Bits) Value seq78 98.7 1e-15 >seq78 Length=41181 Score = 98.7 bits (108), Expect = 1e-15 Identities = 242/363 (67%), Gaps = 8/363 (2%) Strand=Plus/Plus Query 180419 ATTCTTAAAGAATTATTATGGATAATGAAAGGTTTAACAAATTCTAATTTGTTAAATGAT 180478 ||| || | |||||||||||| | | || | || || |||| | |||| || Sbjct 31389 ATTATTCATGAATTATTATGGTTTGTTGCTGGGTCTACTGATGCTAAAATATTAAGCGAA 31448 Query 180479 ATTGGTGTTAAAGTGTGGAATGATAATGGTTCGCGTAAGTTTTTAGATTCTTGTGGATT- 180537 | || || ||| | ||| | | ||||| || ||| |||||||||| | ||||| Sbjct 31449 AAGGGAGTGAAAATCTGGGAAGGCAATGGATCTCGTGAGTTTTTAGACAAATTAGGATTG 31508 Query 180538 --TCATTTTCGAAAAGAAGGTGATTTAGGACCAATTTATGGATTTCAATGGAGACATGCA 180595 |||| ||| ||||| ||||| |||||| ||||||| || |||||||||||| Sbjct 31509 ACTCATCGTCGT---GAAGGGGATTTGGGACCAGTTTATGGTTTCCAATGGAGACATTTT 31565 Query 180596 GGAGCTCAATATATTGACTGTGATACCAACTATATCGGGCAAGGTATAGACCAATTAAGC 180655 || || |||||| || |||||| | | |||| || ||||| | || || ||| Sbjct 31566 GGTGCAGAATATAAAGATTGTGATTCTGATTATAGTGGCCAAGGATTTGATCAGTTACAA 31625 Query 180656 CAAGTTATAGAAACTATAAAAAATAATCCCGAATGCCGAAGAATAATCATAGATAGTTGG 180715 | ||||| ||| | |||| ||||| | ||||||| ||||| | |||| Sbjct 31626 GATGTTATTAAAAAATTGAAAACAAATCCTTATGATAGAAGAATTATCATGTCTGCTTGG 31685 Query 180716 AATGTATCACAATTACCAGATATGGCTCTTCCACCATGTCA-CTGTTTGGTACAATTTTA 180774 ||| | || | || | | ||||| | || |||||||| | ||| || |||||||| Sbjct 31686 AATCCACCAGATTTTGCTAAAATGGCATTACCTCCATGTCATGTATTTTGT-CAATTTTA 31744 Query 180775 TGT 180777 ||| Sbjct 31745 TGT 31747 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 655273627402000