Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20dubliniensis_20[genbank_20GCA_5F000647555.1_202014-04-23] 778 sequences; 14,044,856 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq221 143 3e-29 seq22 89.7 5e-13 >seq221 Length=21533 Score = 143 bits (158), Expect = 3e-29 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 || ||||| | || ||| || | ||| | || ||||||||||| ||||||||||| | Sbjct 10192 CCACCTCTTAATCTCAAGACCAAGTGCAAAGTAGATTCCTTTTGGATGTTGTAGTCAGAT 10133 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || | | | | ||| || | ||||| || |||||||| || | || || || || || Sbjct 10132 AAAGTTCT-ACCGTCTTCCAATTGTTTACCAGCAAAAATTAATCTTTGTTGGTCTGGTGG 10074 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || |||||||| ||||||||||| ||||| ||| | ||||| || ||||| || Sbjct 10073 AATACCTTCTTTGTCTTGAATTTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 10014 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | ||||||||||||||| ||||| || || |||||||||||||| Sbjct 10013 TTCTAAAGTAATGGTTTTACCAGTTAAGGTCTTGACGAAAATTTGCAT 9966 >seq22 Length=82586 Score = 89.7 bits (98), Expect = 5e-13 Identities = 147/210 (70%), Gaps = 4/210 (2%) Strand=Plus/Minus Query 21443 TTTCAAAGAAATTTGTTTTTCCTTCTAGTGCAATGTTTTTCATAAAATTAAAAGGATTGC 21502 ||||||||||||| ||||| || | | || || |||| |||||||| ||| ||||| Sbjct 9480 TTTCAAAGAAATTAGTTTTACCAGCCAATGAGATATTTTCCATAAAATCAAATGGATTAG 9421 Query 21503 TGGCGTAAAAACACCTTTCTTCGTTC--AATTCCACGCACAAACGATCCGCCACGAATTC 21560 | | | || || || || ||| || |||| | || ||||| || || ||||| Sbjct 9420 TAACATTGTAATAC--TTTTTATTTCCAAAGGCCACTAATAATCGATCAGCAACAAATTC 9363 Query 21561 AATGTATTGACACATGCTGTCGCAATTCATGCCCAACAGATCGACCGGTAGCGCTTCGGT 21620 || || || ||||| ||| |||||||| ||||| | | || || ||||| ||| | Sbjct 9362 AACATACTGGCACATCAAGTCACAATTCATTCCCAATAAAGATACTGGAAGCGCATCGCT 9303 Query 21621 GAAAAACTCCTTCTCGATAGCCACCGCTTC 21650 |||| | | ||||| |||| ||| || || Sbjct 9302 GAAATATTTTTTCTCAATAGTCACAGCCTC 9273 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505393485000560