Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20dubliniensis_20[genbank_20GCA_5F000647555.1_202014-04-23]
778 sequences; 14,044,856 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq221 143 3e-29
seq22 89.7 5e-13
>seq221
Length=21533
Score = 143 bits (158), Expect = 3e-29
Identities = 170/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545
|| ||||| | || ||| || | ||| | || ||||||||||| ||||||||||| |
Sbjct 10192 CCACCTCTTAATCTCAAGACCAAGTGCAAAGTAGATTCCTTTTGGATGTTGTAGTCAGAT 10133
Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
|| | | | | ||| || | ||||| || |||||||| || | || || || || ||
Sbjct 10132 AAAGTTCT-ACCGTCTTCCAATTGTTTACCAGCAAAAATTAATCTTTGTTGGTCTGGTGG 10074
Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665
|| |||||||| ||||||||||| ||||| ||| | ||||| || ||||| ||
Sbjct 10073 AATACCTTCTTTGTCTTGAATTTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 10014
Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| | ||||||||||||||| ||||| || || ||||||||||||||
Sbjct 10013 TTCTAAAGTAATGGTTTTACCAGTTAAGGTCTTGACGAAAATTTGCAT 9966
>seq22
Length=82586
Score = 89.7 bits (98), Expect = 5e-13
Identities = 147/210 (70%), Gaps = 4/210 (2%)
Strand=Plus/Minus
Query 21443 TTTCAAAGAAATTTGTTTTTCCTTCTAGTGCAATGTTTTTCATAAAATTAAAAGGATTGC 21502
||||||||||||| ||||| || | | || || |||| |||||||| ||| |||||
Sbjct 9480 TTTCAAAGAAATTAGTTTTACCAGCCAATGAGATATTTTCCATAAAATCAAATGGATTAG 9421
Query 21503 TGGCGTAAAAACACCTTTCTTCGTTC--AATTCCACGCACAAACGATCCGCCACGAATTC 21560
| | | || || || || ||| || |||| | || ||||| || || |||||
Sbjct 9420 TAACATTGTAATAC--TTTTTATTTCCAAAGGCCACTAATAATCGATCAGCAACAAATTC 9363
Query 21561 AATGTATTGACACATGCTGTCGCAATTCATGCCCAACAGATCGACCGGTAGCGCTTCGGT 21620
|| || || ||||| ||| |||||||| ||||| | | || || ||||| ||| |
Sbjct 9362 AACATACTGGCACATCAAGTCACAATTCATTCCCAATAAAGATACTGGAAGCGCATCGCT 9303
Query 21621 GAAAAACTCCTTCTCGATAGCCACCGCTTC 21650
|||| | | ||||| |||| ||| || ||
Sbjct 9302 GAAATATTTTTTCTCAATAGTCACAGCCTC 9273
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505393485000560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |