Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20dubliniensis_20[genbank_20GCA_5F000647555.1_202014-04-23] 778 sequences; 14,044,856 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq22 170 2e-37 seq377 159 3e-34 >seq22 Length=82586 Score = 170 bits (188), Expect = 2e-37 Identities = 566/863 (66%), Gaps = 37/863 (4%) Strand=Plus/Plus Query 43711 TCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTTGGAC 43770 ||| ||| | |||| || |||||||| | |||||||| | ||| || |||||||| Sbjct 8636 TCCTATTAAGTATCCGGAGTTATGGCAATTCTACAAAAAGTCGTTGGCCTCGTTTTGGAC 8695 Query 43771 AGCAGAAGAAGTTGATTTGACTAAAGACTTAGCACATTGGATTGCATTAAAACCA-CAAG 43829 ||| ||||| |||| || | |||||| || || | |||| || ||||| | | | Sbjct 8696 AGCTGAAGAGCTTGACTTAAGTAAAGATTTGGCCGACTGGAA--CAATAAAATGAACGAA 8753 Query 43830 AA--AAACATTTTATATCTTTGG--TTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTC 43885 || ||| ||||| |||| | | ||||| || |||||||| || || || ||| Sbjct 8754 AATGAAAGATTTTTCATCTCCCGAGTGTTGGCATTCTTTGCTGCCTCGGATGGTATTGTC 8813 Query 43886 AATGAAAATTTGGTTAGTCGGTT-TGCGCAAGAAGTTCAATTACCAGAAGCACGATGTTT 43944 ||||| || ||||| || || || ||||| ||| ||||||| || | | | Sbjct 8814 AATGAGAACTTGGTGGAAAATTTCTGTGCT-GAAGTACAAATACCAGAGGCTCAACTGGT 8872 Query 43945 TTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGA 44004 || |||||| || || ||||| || ||||| || | || | | || || Sbjct 8873 ATACAAGTTTCAGATCATGATGGAAAACATCCATTCAGAGACTTATTCGTTGTTAATCGA 8932 Query 44005 TACGTACATCAAAGATGGGCACGAGAAGC--ATCGATTGTTTAATGCGATAGAAACAGTA 44062 || ||| |||| || || |||||| | ||||||||||| || |||| | Sbjct 8933 AACATACTTCAAGGACC--CAGAAGAAGCGGACTTTTTGTTTAATGCTATTGAAAATATC 8990 Query 44063 CCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGATAAATTCAA----ATGATTC 44118 || || | | | ||||| || |||||| | | ||||| |||| | ||| | Sbjct 8991 CCATTCATCAGAGAAAAAGCCGATTGGGCCATCAGGTGGAT----TCAAGACGAGGATGC 9046 Query 44119 TTT---TGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAG--GA 44173 ||| || || || | || |||||||| | || ||||| || || |||||| | Sbjct 9047 TTTGTATGCTGAGAGATTGGTTGCGTTTGCTGCCGTTGAAGGTATATT--TTTCAGTGGT 9104 Query 44174 TCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCA 44233 |||||||| || || || |||||||||||| | || |||||||| || ||||| ||||| Sbjct 9105 TCGTTTGCAGCAATTTTCTGGTTAAAGAAAAGGGGGTTGATGCCAGGATTGACATTTTCG 9164 Query 44234 AATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTGTTACTTGGA 44293 ||||| || || | || || ||||| | || |||| ||| || |||||| | Sbjct 9165 AATGAATTGATTTGCCGAGACGAAGGGATTCACACGGATTATGCCTGTTTGTTATTCTCG 9224 Query 44294 TATCTAGGAGACGATAAGCCTTCATGTAAGACAATTACAGATATTGTTGTAGAGGCAGTA 44353 ||| || ||| |||| ||||| | | ||| | || || ||||| || Sbjct 9225 TATTTA-AAGA--ATAAACCTTCTCCAGAAATCATTGAGAAAATCATTACCGAGGCTGTG 9281 Query 44354 AAGATAGAACAAGAATTTATGACAACAGCATTACCTGTAAATTTAATAGGAATGAATGAA 44413 | || || || ||| | | | || | || ||| |||| | ||||||||| Sbjct 9282 ACTATTGAGAAAAAATATTTCAGCGATGCGCTTCCAGTATCTTTATTGGGAATGAATTGT 9341 Query 44414 CTTTTGATGAACCAATATATTGAATACATTGCAGATCGTTTACTTTTGGAACTGGGTTGC 44473 |||||| ||| ||| |||||| |||| ||||| ||| | ||| || | | Sbjct 9342 GACTTGATGTGCCAGTATGTTGAATTTGTTGCTGATCGATTATTAGTGG-CCT--TTGGA 9398 Query 44474 GATAAACACTAT---ATTGTACAAAACCCGTTTGATTTTATGGAAAATATTTCGTTGGAA 44530 ||||| | ||| | ||| || || |||||||||||||||||||| || |||| Sbjct 9399 AATAAAAAGTATTACAATGTTACTAATCCATTTGATTTTATGGAAAATATCTCATTGGCT 9458 Query 44531 GGCAAAACAAACTTTTTTGAAAA 44553 || ||||| || || |||||||| Sbjct 9459 GGTAAAACTAATTTCTTTGAAAA 9481 >seq377 Length=10469 Score = 159 bits (176), Expect = 3e-34 Identities = 254/363 (70%), Gaps = 15/363 (4%) Strand=Plus/Minus Query 19429 CCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGAAGAAAAT 19488 || |||||||| |||||||| ||||| || | ||||||||| ||| ||| ||||||||| Sbjct 8121 CCAAAAATTGTCAATGGTCCAGAAATGTTGAGTAAATATGTTGGTGCATCTGAAGAAAAT 8062 Query 19489 GTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAACGTTTAGGGCGCAAAAGTTC- 19547 | || ||| ||| || ||||||| |||| | ||| | | || | | | ||| Sbjct 8061 ATTCGTAATTTATTTAAAGATGCTGAAGCAGAATATAAAT-TAAAAGGTGAAGA--TTCA 8005 Query 19548 --TTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGTTCTGG- 19604 ||| || |||| ||| | ||||||||||| | | | || |||||||| || || Sbjct 8004 GATTTACATGTTATTATATTTGATGAATTGGATTCTGTTTTCAAACAAAGAGGATCAGGG 7945 Query 19605 --------TGTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGAC 19656 || | ||| || ||| | ||||||||||||| | | || ||| | || Sbjct 7944 AAATCAGATGGCACTGGTGTTGGTGATAATGTTGTCAATCAATTATTATCGAAAATGGAT 7885 Query 19657 GGTGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTAATA 19716 || ||| ||||| ||||||||||||| |||||||| ||||| ||| | | || || || Sbjct 7884 GGGGTTGACCAATTGAATAATATTTTGGTTATTGGTATGACAAATCGTTTAGATTTGATT 7825 Query 19717 GACAGCGCCTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATTAACTTACCCGAT 19776 || | || |||||| |||| ||| | || ||||| | || ||||| ||||| ||| Sbjct 7824 GATACTGCTTTATTAAGACCAGGTAGATTTGAAATTCAAATTGAAATATCTTTACCTGAT 7765 Query 19777 GAA 19779 ||| Sbjct 7764 GAA 7762 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397452231371890