Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20dubliniensis_20[genbank_20GCA_5F000647555.1_202014-04-23]
778 sequences; 14,044,856 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq22 170 2e-37
seq377 159 3e-34
>seq22
Length=82586
Score = 170 bits (188), Expect = 2e-37
Identities = 566/863 (66%), Gaps = 37/863 (4%)
Strand=Plus/Plus
Query 43711 TCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTTGGAC 43770
||| ||| | |||| || |||||||| | |||||||| | ||| || ||||||||
Sbjct 8636 TCCTATTAAGTATCCGGAGTTATGGCAATTCTACAAAAAGTCGTTGGCCTCGTTTTGGAC 8695
Query 43771 AGCAGAAGAAGTTGATTTGACTAAAGACTTAGCACATTGGATTGCATTAAAACCA-CAAG 43829
||| ||||| |||| || | |||||| || || | |||| || ||||| | | |
Sbjct 8696 AGCTGAAGAGCTTGACTTAAGTAAAGATTTGGCCGACTGGAA--CAATAAAATGAACGAA 8753
Query 43830 AA--AAACATTTTATATCTTTGG--TTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTC 43885
|| ||| ||||| |||| | | ||||| || |||||||| || || || |||
Sbjct 8754 AATGAAAGATTTTTCATCTCCCGAGTGTTGGCATTCTTTGCTGCCTCGGATGGTATTGTC 8813
Query 43886 AATGAAAATTTGGTTAGTCGGTT-TGCGCAAGAAGTTCAATTACCAGAAGCACGATGTTT 43944
||||| || ||||| || || || ||||| ||| ||||||| || | | |
Sbjct 8814 AATGAGAACTTGGTGGAAAATTTCTGTGCT-GAAGTACAAATACCAGAGGCTCAACTGGT 8872
Query 43945 TTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGA 44004
|| |||||| || || ||||| || ||||| || | || | | || ||
Sbjct 8873 ATACAAGTTTCAGATCATGATGGAAAACATCCATTCAGAGACTTATTCGTTGTTAATCGA 8932
Query 44005 TACGTACATCAAAGATGGGCACGAGAAGC--ATCGATTGTTTAATGCGATAGAAACAGTA 44062
|| ||| |||| || || |||||| | ||||||||||| || |||| |
Sbjct 8933 AACATACTTCAAGGACC--CAGAAGAAGCGGACTTTTTGTTTAATGCTATTGAAAATATC 8990
Query 44063 CCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGATAAATTCAA----ATGATTC 44118
|| || | | | ||||| || |||||| | | ||||| |||| | ||| |
Sbjct 8991 CCATTCATCAGAGAAAAAGCCGATTGGGCCATCAGGTGGAT----TCAAGACGAGGATGC 9046
Query 44119 TTT---TGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAG--GA 44173
||| || || || | || |||||||| | || ||||| || || |||||| |
Sbjct 9047 TTTGTATGCTGAGAGATTGGTTGCGTTTGCTGCCGTTGAAGGTATATT--TTTCAGTGGT 9104
Query 44174 TCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCA 44233
|||||||| || || || |||||||||||| | || |||||||| || ||||| |||||
Sbjct 9105 TCGTTTGCAGCAATTTTCTGGTTAAAGAAAAGGGGGTTGATGCCAGGATTGACATTTTCG 9164
Query 44234 AATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTGTTACTTGGA 44293
||||| || || | || || ||||| | || |||| ||| || |||||| |
Sbjct 9165 AATGAATTGATTTGCCGAGACGAAGGGATTCACACGGATTATGCCTGTTTGTTATTCTCG 9224
Query 44294 TATCTAGGAGACGATAAGCCTTCATGTAAGACAATTACAGATATTGTTGTAGAGGCAGTA 44353
||| || ||| |||| ||||| | | ||| | || || ||||| ||
Sbjct 9225 TATTTA-AAGA--ATAAACCTTCTCCAGAAATCATTGAGAAAATCATTACCGAGGCTGTG 9281
Query 44354 AAGATAGAACAAGAATTTATGACAACAGCATTACCTGTAAATTTAATAGGAATGAATGAA 44413
| || || || ||| | | | || | || ||| |||| | |||||||||
Sbjct 9282 ACTATTGAGAAAAAATATTTCAGCGATGCGCTTCCAGTATCTTTATTGGGAATGAATTGT 9341
Query 44414 CTTTTGATGAACCAATATATTGAATACATTGCAGATCGTTTACTTTTGGAACTGGGTTGC 44473
|||||| ||| ||| |||||| |||| ||||| ||| | ||| || | |
Sbjct 9342 GACTTGATGTGCCAGTATGTTGAATTTGTTGCTGATCGATTATTAGTGG-CCT--TTGGA 9398
Query 44474 GATAAACACTAT---ATTGTACAAAACCCGTTTGATTTTATGGAAAATATTTCGTTGGAA 44530
||||| | ||| | ||| || || |||||||||||||||||||| || ||||
Sbjct 9399 AATAAAAAGTATTACAATGTTACTAATCCATTTGATTTTATGGAAAATATCTCATTGGCT 9458
Query 44531 GGCAAAACAAACTTTTTTGAAAA 44553
|| ||||| || || ||||||||
Sbjct 9459 GGTAAAACTAATTTCTTTGAAAA 9481
>seq377
Length=10469
Score = 159 bits (176), Expect = 3e-34
Identities = 254/363 (70%), Gaps = 15/363 (4%)
Strand=Plus/Minus
Query 19429 CCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGAAGAAAAT 19488
|| |||||||| |||||||| ||||| || | ||||||||| ||| ||| |||||||||
Sbjct 8121 CCAAAAATTGTCAATGGTCCAGAAATGTTGAGTAAATATGTTGGTGCATCTGAAGAAAAT 8062
Query 19489 GTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAACGTTTAGGGCGCAAAAGTTC- 19547
| || ||| ||| || ||||||| |||| | ||| | | || | | | |||
Sbjct 8061 ATTCGTAATTTATTTAAAGATGCTGAAGCAGAATATAAAT-TAAAAGGTGAAGA--TTCA 8005
Query 19548 --TTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGTTCTGG- 19604
||| || |||| ||| | ||||||||||| | | | || |||||||| || ||
Sbjct 8004 GATTTACATGTTATTATATTTGATGAATTGGATTCTGTTTTCAAACAAAGAGGATCAGGG 7945
Query 19605 --------TGTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGAC 19656
|| | ||| || ||| | ||||||||||||| | | || ||| | ||
Sbjct 7944 AAATCAGATGGCACTGGTGTTGGTGATAATGTTGTCAATCAATTATTATCGAAAATGGAT 7885
Query 19657 GGTGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTAATA 19716
|| ||| ||||| ||||||||||||| |||||||| ||||| ||| | | || || ||
Sbjct 7884 GGGGTTGACCAATTGAATAATATTTTGGTTATTGGTATGACAAATCGTTTAGATTTGATT 7825
Query 19717 GACAGCGCCTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATTAACTTACCCGAT 19776
|| | || |||||| |||| ||| | || ||||| | || ||||| ||||| |||
Sbjct 7824 GATACTGCTTTATTAAGACCAGGTAGATTTGAAATTCAAATTGAAATATCTTTACCTGAT 7765
Query 19777 GAA 19779
|||
Sbjct 7764 GAA 7762
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397452231371890
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |