Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20dubliniensis_20[genbank_20GCA_5F000647555.1_202014-04-23] 778 sequences; 14,044,856 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq221 131 4e-25 seq66 96.9 7e-15 >seq221 Length=21533 Score = 131 bits (144), Expect = 4e-25 Identities = 144/192 (75%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||| ||||||||||||||||||| | || | || || || | |||||| || ||||| Sbjct 10157 TTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTACCGTCTTCCAATTGTTTACCAGCAAA 10098 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 || || | ||||||||| |||||||| || |||||||| || || | || || | Sbjct 10097 AATTAATCTTTGTTGGTCTGGTGGAATACCTTCTTTGTCTTGAATTTTGGACTTGACATT 10038 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 || |||||||| |||| ||| ||||| | ||| || || ||||| || || ||||| || Sbjct 10037 GTCAATAGTGTCAGAAGATTCAACTTCTAAAGTAATGGTTTTACCAGTTAAGGTCTTGAC 9978 Query 283088 GAATATCTGCAT 283099 ||| || ||||| Sbjct 9977 GAAAATTTGCAT 9966 >seq66 Length=44876 Score = 96.9 bits (106), Expect = 7e-15 Identities = 146/204 (72%), Gaps = 8/204 (4%) Strand=Plus/Minus Query 316990 TCATGCTCAACATATGCAGTTTTCAGAAT-ATCCTTCGTCGGGAACCCTTCCAACTGACC 317048 || || |||||||| | ||||| | | | ||| | || ||||| ||||| | ||||| Sbjct 33443 TCGTGTTCAACATAAACGGTTTT-ACATTCATCTTGAGTTGGGAAACCTTCAACTTGACC 33385 Query 317049 GTTCACAATCGCCCTCATCAGTGTCGACTTGCCAGCACCATTGGGGCCGCAAAGACCATA 317108 ||| |||| || ||||||| || || || ||||||||||| || || || | |||||| Sbjct 33384 GTTGGCAATAGCTCTCATCAAAGTAGATTTACCAGCACCATTTGGACCACACAAACCATA 33325 Query 317109 ---CCGATTTCCCTTCTTCAGATTAAAACGGGTGTTGTTCAGAAGAATCTTACCACCATA 317165 | |||| |||| | | || |||| ||||||| | ||||| ||||||| Sbjct 33324 TCTTCTGTTTC---TCTTTAATCTGAATTGGGTCTTGTTCAACAAGATCTTGGCACCATA 33268 Query 317166 TGCCAGAGAGAACTCACAATCACA 317189 |||| |||||| ||||||| ||| Sbjct 33267 AGCCAAAGAGAATTCACAATTACA 33244 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046728765972812