Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20dubliniensis_20[genbank_20GCA_5F000647555.1_202014-04-23] 778 sequences; 14,044,856 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq78 118 1e-21 seq34 98.7 1e-15 >seq78 Length=41181 Score = 118 bits (130), Expect = 1e-21 Identities = 304/475 (64%), Gaps = 51/475 (11%) Strand=Plus/Plus Query 50473 AAGGAGATTTAGGACCTGTTTACGGTTTTCAATGGAGACATTTTGGAGCGCGTTACATAA 50532 |||| ||||| ||||| ||||| ||||| ||||||||||||||||| || || | | Sbjct 31522 AAGGGGATTTGGGACCAGTTTATGGTTTCCAATGGAGACATTTTGGTGCAGAATATAAAG 31581 Query 50533 ATTGCGACGTAAATTACGAAGGTCAAGGCGTGGATCAACTGCAAAAAATTATAACGACGT 50592 |||| || |||| || ||||| | ||||| | ||| | |||| | | | Sbjct 31582 ATTGTGATTCTGATTATAGTGGCCAAGGATTTGATCAGTTACAAGATGTTATTAAAAAAT 31641 Query 50593 TGAAAACAAACCCCGACGATCGGCGTATTTTAATGACCGCCTGGAATCCAACCGATATAG 50652 |||||||||| || | ||| | | ||| | ||| | || ||||||||| | ||| | | Sbjct 31642 TGAAAACAAATCCTTATGATAGAAGAATTATCATGTCTGCTTGGAATCCACCAGATTTTG 31701 Query 50653 ATCAAACCGTTTTACCTCCGTGTCATGTTTTATGTCAATTTTATG--------------- 50697 | ||| | |||||||| |||||||| || ||||||||||||| Sbjct 31702 CTAAAATGGCATTACCTCCATGTCATGTATTTTGTCAATTTTATGTGAACTTCCCTACAT 31761 Query 50698 -----CCA--------------CAGACAATGT-----------------TTTATCCTGTC 50721 ||| || |||| | ||||| ||| Sbjct 31762 CTCAACCAGACTCAAATAATCCCAAACAAGCTAAAACCGCCAAACCAAAATTATCTTGTT 31821 Query 50722 AATGTTATCAAAGATCAGCTGATATGGGTTTAGGCGTTCCTTTCAACGTAGCTTCTTACG 50781 || ||||||||||| ||||||||| ||||| || || || || | || || |||| Sbjct 31822 TATTGTATCAAAGATCTTGTGATATGGGGTTAGGTGTACCATTTAATATTGCATCCTACG 31881 Query 50782 CTTTATTAACGTATTTGATCGCTCAAGCCGTCGATATGAAACCGGGAGAATTTATTCATA 50841 | || ||||| | |||| || || | || |||||| | || ||||| ||||||| Sbjct 31882 CGTTGTTAACTAAGATGATTGCACATGTGGTGGATATGGACTGTGGCGAATTCATTCATA 31941 Query 50842 CGTTAGGAGACGCTCATATTTACCTCGATCACGTCGATGCTTTAAAGGAGCAATT 50896 | ||||| || || ||| | || | ||||| | ||||| || ||||| ||||| Sbjct 31942 CTTTAGGTGATGCACATGTCTATTTGGATCATATAGATGCCTTGAAGGAACAATT 31996 >seq34 Length=64929 Score = 98.7 bits (108), Expect = 1e-15 Identities = 132/181 (73%), Gaps = 2/181 (1%) Strand=Plus/Plus Query 63718 GTTAAAATAAAATTAAGATCTTCTAAAATACCAGAAATAGGTGATAAATTTGCTTCTTTT 63777 || ||| ||| | | ||| | ||||| | ||| |||| || ||||| ||||| || Sbjct 25168 GTAAAAGTAAGAATGAGAACAACTAAAGTTCCACAAATTGGGGATAAGTTTGCCTCGAG- 25226 Query 63778 ACA-GCTCAAAAAGGTACGTGTGGTATGATTTATCGACAAGAAGATATGCCTTTTACCAA 63836 ||| | |||||||||||| |||| ||| ||| |||| ||||||||||||||||| Sbjct 25227 ACACGGTCAAAAAGGTACTATTGGTGTGACATATAGACATGAAGATATGCCTTTTACAGC 25286 Query 63837 AGACGGTATCGTACCCGATCTCGTCATCAATCCACACGCTTTTCCCAGTCGTATGACCGT 63896 || ||||| || || ||| | | ||||| || || ||| |||| ||||||||| || Sbjct 25287 CGAAGGTATTGTTCCAGATTTAATTATCAACCCTCATGCTATTCCATCTCGTATGACGGT 25346 Query 63897 T 63897 | Sbjct 25347 T 25347 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 667068712693680