Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20dubliniensis_20[genbank_20GCA_5F000647575.1_202014-04-23]
892 sequences; 13,998,205 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq2 179 4e-40
>seq2
Length=135431
Score = 179 bits (198), Expect = 4e-40
Identities = 345/501 (69%), Gaps = 6/501 (1%)
Strand=Plus/Plus
Query 16674 TTTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCT 16733
|||||||||| ||| | ||||| || || |||||||| || | | || ||||| |
Sbjct 59362 TTTGGTAATCAGAAACTCTCTTTTCAAAGAAATTAGTTTTACCAGCCAAGGAGATATTTT 59421
Query 16734 CCATGAAATCAAAAGGATTAGTAGC-TGAAAATATTTTAGAGTACCCCAGTTCGGCGATT 16792
||||||||||||| ||||||||| | | |||| ||| | | || || | | | |
Sbjct 59422 CCATGAAATCAAATGGATTAGTAACATTGTAATACTTTTTATTTCCAAAGGCCA-CTAAT 59480
Query 16793 AATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGA 16852
|||| ||| || |||||||| | ||| |||||||| || || || |||||||| | | |
Sbjct 59481 AATCGATCAGCAACAAATTCAACATACTGGCACATCAAGTCACAATTCATTCCCAATAAA 59540
Query 16853 CGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATA 16912
||| ||||| || || | ||| || || ||| ||| || || || |||| ||
Sbjct 59541 GATACTGGAAGCGCATCGCTGAAATATTTTTTCTCAATAGTCACAGCCTCGGTAATGATT 59600
Query 16913 CTAGCAACTCGTTCCTCG-GACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAA 16971
| ||| | || || | || ||| ||| || | || || | || ||| || |
Sbjct 59601 TTCTCAA-TGATTTCTGGAGAAGGTTTATTCTTTAAATACGAGAATAACAAACAGGCATA 59659
Query 16972 ATCGCAATGTAATCCCT-CGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCA 17030
||| || ||||||| |||||| || || | ||| || ||||||||||| || ||||
Sbjct 59660 ATCCGTGTG-AATCCCTTCGTCTCGGCAAATCAATTCATTCGAAAATGTCAATCCTGGCA 59718
Query 17031 TCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCT 17090
|| || | |||||||||||| || || || || ||||| ||| || |||||||| |
Sbjct 59719 TCAACCCCCTTTTCTTTAACCAGAAAATTGCTGCAAACGAACCACTGAAAAATATACCTT 59778
Query 17091 CGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATT 17150
| |||| |||||||| | |||| || || ||| || || | || |||||||
Sbjct 59779 CAACGGCAGCAAACGCAACCAATCTCTCAGCATACAAAGCATCCTCGTCTTGAATCCACC 59838
Query 17151 TCTGCACCCACTCGGCTTTTT 17171
| |||| ||||||||||
Sbjct 59839 TGATGGCCCAATCGGCTTTTT 59859
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517539829366560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |