Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20dubliniensis_20[genbank_20GCA_5F000647575.1_202014-04-23] 892 sequences; 13,998,205 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq2 179 4e-40 >seq2 Length=135431 Score = 179 bits (198), Expect = 4e-40 Identities = 345/501 (69%), Gaps = 6/501 (1%) Strand=Plus/Plus Query 16674 TTTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCT 16733 |||||||||| ||| | ||||| || || |||||||| || | | || ||||| | Sbjct 59362 TTTGGTAATCAGAAACTCTCTTTTCAAAGAAATTAGTTTTACCAGCCAAGGAGATATTTT 59421 Query 16734 CCATGAAATCAAAAGGATTAGTAGC-TGAAAATATTTTAGAGTACCCCAGTTCGGCGATT 16792 ||||||||||||| ||||||||| | | |||| ||| | | || || | | | | Sbjct 59422 CCATGAAATCAAATGGATTAGTAACATTGTAATACTTTTTATTTCCAAAGGCCA-CTAAT 59480 Query 16793 AATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGA 16852 |||| ||| || |||||||| | ||| |||||||| || || || |||||||| | | | Sbjct 59481 AATCGATCAGCAACAAATTCAACATACTGGCACATCAAGTCACAATTCATTCCCAATAAA 59540 Query 16853 CGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATA 16912 ||| ||||| || || | ||| || || ||| ||| || || || |||| || Sbjct 59541 GATACTGGAAGCGCATCGCTGAAATATTTTTTCTCAATAGTCACAGCCTCGGTAATGATT 59600 Query 16913 CTAGCAACTCGTTCCTCG-GACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAA 16971 | ||| | || || | || ||| ||| || | || || | || ||| || | Sbjct 59601 TTCTCAA-TGATTTCTGGAGAAGGTTTATTCTTTAAATACGAGAATAACAAACAGGCATA 59659 Query 16972 ATCGCAATGTAATCCCT-CGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCA 17030 ||| || ||||||| |||||| || || | ||| || ||||||||||| || |||| Sbjct 59660 ATCCGTGTG-AATCCCTTCGTCTCGGCAAATCAATTCATTCGAAAATGTCAATCCTGGCA 59718 Query 17031 TCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCT 17090 || || | |||||||||||| || || || || ||||| ||| || |||||||| | Sbjct 59719 TCAACCCCCTTTTCTTTAACCAGAAAATTGCTGCAAACGAACCACTGAAAAATATACCTT 59778 Query 17091 CGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATT 17150 | |||| |||||||| | |||| || || ||| || || | || ||||||| Sbjct 59779 CAACGGCAGCAAACGCAACCAATCTCTCAGCATACAAAGCATCCTCGTCTTGAATCCACC 59838 Query 17151 TCTGCACCCACTCGGCTTTTT 17171 | |||| |||||||||| Sbjct 59839 TGATGGCCCAATCGGCTTTTT 59859 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517539829366560