Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20dubliniensis_20[genbank_20GCA_5F000647575.1_202014-04-23]
892 sequences; 13,998,205 total letters
Query= NC_001350.1
Length=112930
Score E
Sequences producing significant alignments: (Bits) Value
seq57 163 2e-35
>seq57
Length=48952
Score = 163 bits (180), Expect = 2e-35
Identities = 298/432 (69%), Gaps = 7/432 (2%)
Strand=Plus/Plus
Query 101867 ACATAAAATTGACTTAATACATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAACA 101926
||||||||||||| ||||||||||| || || || ||||||||| || |||| |
Sbjct 17214 ACATAAAATTGACAAAATACATGACATGGAGGTAATGCCATTTTAGCAAAATCTGGTGGA 17273
Query 101927 TTCCAAGCACACATTAACATCCTTCTATCTGTAGGGTTTGTTTTTATAGTATCAATCAAC 101986
||||||||| |||| | || |||||||| ||| |||||||| | | | ||| |
Sbjct 17274 TTCCAAGCAGACATGATAATTCTTCTATCATAAGGATTTGTTTTCAATTTTTTAATAACA 17333
Query 101987 TGTTTTAATTGGTCAACTCCTTCTCCTTTATAATCGCGCCCAACACCTTTATATTCTGCT 102046
| || ||| || |||| ||||| || ||||||| || | |||||||||||||
Sbjct 17334 TCTTGTAACTGATCAAATCCTTGGCCACTATAATCAGAATCACAATCTTTATATTCTGCA 17393
Query 102047 CCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTCATAA 102106
|| ||||| ||||| || || ||||| || ||||| | ||| |||||| | | |
Sbjct 17394 CCAAAATGTCTCCATTGGAAACCATAAACTGGTCCCAAATCCCCTTCACGACGATGAGTC 17453
Query 102107 AAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATGTGCACGCCAGCT 102166
|| || | ||| |||||||| | ||||||||| | ||||| || | ||| || |
Sbjct 17454 AATCCTAATTTGTCTAAAAACTCACGAGATCCATTGCCTTCCCAGATTTTCACTCCCTTT 17513
Query 102167 --GCTGATAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAGTTCTTCAACAA 102224
||| | | | || || |||||||| || | |||||| || | ||| | || ||
Sbjct 17514 TCGCTTA-ATATTTTAGC-ATCAGTAGACCCAGCAACAAACCATAATAATTCATGAATAA 17571
Query 102225 CACCTCTCCAAAATACTCTCTTAGTAGTTAAAAGTGGAAA---TTCATTTTCTAAACTAA 102281
||| | |||| || | ||||| ||||| | ||||| |||||| |||| ||
Sbjct 17572 TCCCTTTTGAAAAAACCTTTTTAGTGGTTAATAAAGGAAAGGTATCATTTGATAAATCAA 17631
Query 102282 ACCTAGACTGTG 102293
| || ||||||
Sbjct 17632 ATCTTAACTGTG 17643
Score = 95.1 bits (104), Expect = 9e-15
Identities = 120/164 (73%), Gaps = 1/164 (1%)
Strand=Plus/Plus
Query 101677 TTTAAGAGCATCAATGTGATCTACATAGATGTGAGCATCTCCTATAGTATGGATAAACTC 101736
|||||| ||||| || ||||| | ||| | || ||||| |||| |||||| || || ||
Sbjct 16974 TTTAAG-GCATCTATATGATCCAAATAAACATGTGCATCACCTAAAGTATGAATGAATTC 17032
Query 101737 TCCAGGCACTAGATTAGTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAAT 101796
||| | | || ||||| |||||||| |||||| | | ||| |||||
Sbjct 17033 GCCACAGTCCATATCCACCACATGTGCAATCATCTTAGTTAACAACGCGTAGGATGCAAT 17092
Query 101797 GTTAAATGGCACTCCTAACCCCATATCAGCTGATCTTTGATACA 101840
|||||||| || ||||||||||||||| |||||||||||||
Sbjct 17093 ATTAAATGGTACACCTAACCCCATATCACAAGATCTTTGATACA 17136
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 361247272747892
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |