Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20dubliniensis_20[genbank_20GCA_5F000647575.1_202014-04-23] 892 sequences; 13,998,205 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq57 163 2e-35 >seq57 Length=48952 Score = 163 bits (180), Expect = 2e-35 Identities = 298/432 (69%), Gaps = 7/432 (2%) Strand=Plus/Plus Query 101867 ACATAAAATTGACTTAATACATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAACA 101926 ||||||||||||| ||||||||||| || || || ||||||||| || |||| | Sbjct 17214 ACATAAAATTGACAAAATACATGACATGGAGGTAATGCCATTTTAGCAAAATCTGGTGGA 17273 Query 101927 TTCCAAGCACACATTAACATCCTTCTATCTGTAGGGTTTGTTTTTATAGTATCAATCAAC 101986 ||||||||| |||| | || |||||||| ||| |||||||| | | | ||| | Sbjct 17274 TTCCAAGCAGACATGATAATTCTTCTATCATAAGGATTTGTTTTCAATTTTTTAATAACA 17333 Query 101987 TGTTTTAATTGGTCAACTCCTTCTCCTTTATAATCGCGCCCAACACCTTTATATTCTGCT 102046 | || ||| || |||| ||||| || ||||||| || | ||||||||||||| Sbjct 17334 TCTTGTAACTGATCAAATCCTTGGCCACTATAATCAGAATCACAATCTTTATATTCTGCA 17393 Query 102047 CCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTCATAA 102106 || ||||| ||||| || || ||||| || ||||| | ||| |||||| | | | Sbjct 17394 CCAAAATGTCTCCATTGGAAACCATAAACTGGTCCCAAATCCCCTTCACGACGATGAGTC 17453 Query 102107 AAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATGTGCACGCCAGCT 102166 || || | ||| |||||||| | ||||||||| | ||||| || | ||| || | Sbjct 17454 AATCCTAATTTGTCTAAAAACTCACGAGATCCATTGCCTTCCCAGATTTTCACTCCCTTT 17513 Query 102167 --GCTGATAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAGTTCTTCAACAA 102224 ||| | | | || || |||||||| || | |||||| || | ||| | || || Sbjct 17514 TCGCTTA-ATATTTTAGC-ATCAGTAGACCCAGCAACAAACCATAATAATTCATGAATAA 17571 Query 102225 CACCTCTCCAAAATACTCTCTTAGTAGTTAAAAGTGGAAA---TTCATTTTCTAAACTAA 102281 ||| | |||| || | ||||| ||||| | ||||| |||||| |||| || Sbjct 17572 TCCCTTTTGAAAAAACCTTTTTAGTGGTTAATAAAGGAAAGGTATCATTTGATAAATCAA 17631 Query 102282 ACCTAGACTGTG 102293 | || |||||| Sbjct 17632 ATCTTAACTGTG 17643 Score = 95.1 bits (104), Expect = 9e-15 Identities = 120/164 (73%), Gaps = 1/164 (1%) Strand=Plus/Plus Query 101677 TTTAAGAGCATCAATGTGATCTACATAGATGTGAGCATCTCCTATAGTATGGATAAACTC 101736 |||||| ||||| || ||||| | ||| | || ||||| |||| |||||| || || || Sbjct 16974 TTTAAG-GCATCTATATGATCCAAATAAACATGTGCATCACCTAAAGTATGAATGAATTC 17032 Query 101737 TCCAGGCACTAGATTAGTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAAT 101796 ||| | | || ||||| |||||||| |||||| | | ||| ||||| Sbjct 17033 GCCACAGTCCATATCCACCACATGTGCAATCATCTTAGTTAACAACGCGTAGGATGCAAT 17092 Query 101797 GTTAAATGGCACTCCTAACCCCATATCAGCTGATCTTTGATACA 101840 |||||||| || ||||||||||||||| ||||||||||||| Sbjct 17093 ATTAAATGGTACACCTAACCCCATATCACAAGATCTTTGATACA 17136 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361247272747892