Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20dubliniensis_20[genbank_20GCA_5F000647575.1_202014-04-23]
892 sequences; 13,998,205 total letters
Query= NC_001987.1
Length=108409
Score E
Sequences producing significant alignments: (Bits) Value
seq57 150 1e-31
>seq57
Length=48952
Score = 150 bits (166), Expect = 1e-31
Identities = 276/401 (69%), Gaps = 4/401 (1%)
Strand=Plus/Plus
Query 97230 CACATAAAACTGACTCAATACATGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGAC 97289
||||||||| |||| ||||||||||| || || || |||||||| | || ||||
Sbjct 17213 CACATAAAATTGACAAAATACATGACATGGAGGTAATGCCATTTTAGCAAAATCTGGTGG 17272
Query 97290 ATTCCAAGCACACATCAACATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAATTAT 97349
|||||||||| |||| | ||||||||||| || ||||| | | | ||||| |
Sbjct 17273 ATTCCAAGCAGACATGATAATTCTTCTATCATAAGGATTTGTTTTCAATTTTTTAATAAC 17332
Query 97350 CTGCTTTAATTGATCAACGCCTTCTCCACCATAATTGTGCTTAAGACCTTGATATTCTGC 97409
| | ||| ||||||| |||| |||| ||||| | | | ||| |||||||||
Sbjct 17333 ATCTTGTAACTGATCAAATCCTTGGCCACTATAATCAGAATCACAATCTTTATATTCTGC 17392
Query 97410 TCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCTCTATCACA 97469
|||||||| ||||||||||| |||||||| ||||| | || ||||| | || |
Sbjct 17393 ACCAAAATGTCTCCATTGGAAACCATAAACTGGTCCCAAATCCCCTTCACGACGATGAGT 17452
Query 97470 GAAACCAAGCTTATCTAAATAGGACCTAGATCCATTTGCATCCCAAATGTGCACACCAGA 97529
|| || | || |||||| | | ||||||||| | ||||| || | ||| ||
Sbjct 17453 CAATCCTAATTTGTCTAAAAACTCACGAGATCCATTGCCTTCCCAGATTTTCACTCCCTT 17512
Query 97530 T--GCTGCAAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAATTCTTCCACA 97587
| ||| || | || || |||||||| || | |||||| || ||||| | | |
Sbjct 17513 TTCGCT-TAATATTTTAGC-ATCAGTAGACCCAGCAACAAACCATAATAATTCATGAATA 17570
Query 97588 ACACCTCTCCAAAATACTCTCTTAGTTGTTAAGAGAGGAAA 97628
| ||| | |||| || | ||||| ||||| | ||||||
Sbjct 17571 ATCCCTTTTGAAAAAACCTTTTTAGTGGTTAATAAAGGAAA 17611
Score = 87.8 bits (96), Expect = 1e-12
Identities = 114/158 (72%), Gaps = 0/158 (0%)
Strand=Plus/Plus
Query 97048 GCATCAATGTGATTCACATAAATGTGAGCATCTCCTAAAGTGTGAATAAATTCTCCAGGA 97107
||||| || |||| || ||||| || ||||| |||||||| ||||| ||||| |||
Sbjct 16980 GCATCTATATGATCCAAATAAACATGTGCATCACCTAAAGTATGAATGAATTCGCCACAG 17039
Query 97108 ACTAAATCAGTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAA 97167
| | ||| ||||| || ||||| |||||| | | ||| ||||| |||||
Sbjct 17040 TCCATATCCACCACATGTGCAATCATCTTAGTTAACAACGCGTAGGATGCAATATTAAAT 17099
Query 97168 GGCACCCCTAGTCCCATATCAGCTGATCTTTGATATAA 97205
|| || |||| ||||||||| ||||||||||| ||
Sbjct 17100 GGTACACCTAACCCCATATCACAAGATCTTTGATACAA 17137
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 346780230024440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |