Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20dubliniensis_20[genbank_20GCA_5F000647575.1_202014-04-23] 892 sequences; 13,998,205 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq57 150 1e-31 >seq57 Length=48952 Score = 150 bits (166), Expect = 1e-31 Identities = 276/401 (69%), Gaps = 4/401 (1%) Strand=Plus/Plus Query 97230 CACATAAAACTGACTCAATACATGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGAC 97289 ||||||||| |||| ||||||||||| || || || |||||||| | || |||| Sbjct 17213 CACATAAAATTGACAAAATACATGACATGGAGGTAATGCCATTTTAGCAAAATCTGGTGG 17272 Query 97290 ATTCCAAGCACACATCAACATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAATTAT 97349 |||||||||| |||| | ||||||||||| || ||||| | | | ||||| | Sbjct 17273 ATTCCAAGCAGACATGATAATTCTTCTATCATAAGGATTTGTTTTCAATTTTTTAATAAC 17332 Query 97350 CTGCTTTAATTGATCAACGCCTTCTCCACCATAATTGTGCTTAAGACCTTGATATTCTGC 97409 | | ||| ||||||| |||| |||| ||||| | | | ||| ||||||||| Sbjct 17333 ATCTTGTAACTGATCAAATCCTTGGCCACTATAATCAGAATCACAATCTTTATATTCTGC 17392 Query 97410 TCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCTCTATCACA 97469 |||||||| ||||||||||| |||||||| ||||| | || ||||| | || | Sbjct 17393 ACCAAAATGTCTCCATTGGAAACCATAAACTGGTCCCAAATCCCCTTCACGACGATGAGT 17452 Query 97470 GAAACCAAGCTTATCTAAATAGGACCTAGATCCATTTGCATCCCAAATGTGCACACCAGA 97529 || || | || |||||| | | ||||||||| | ||||| || | ||| || Sbjct 17453 CAATCCTAATTTGTCTAAAAACTCACGAGATCCATTGCCTTCCCAGATTTTCACTCCCTT 17512 Query 97530 T--GCTGCAAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAATTCTTCCACA 97587 | ||| || | || || |||||||| || | |||||| || ||||| | | | Sbjct 17513 TTCGCT-TAATATTTTAGC-ATCAGTAGACCCAGCAACAAACCATAATAATTCATGAATA 17570 Query 97588 ACACCTCTCCAAAATACTCTCTTAGTTGTTAAGAGAGGAAA 97628 | ||| | |||| || | ||||| ||||| | |||||| Sbjct 17571 ATCCCTTTTGAAAAAACCTTTTTAGTGGTTAATAAAGGAAA 17611 Score = 87.8 bits (96), Expect = 1e-12 Identities = 114/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 97048 GCATCAATGTGATTCACATAAATGTGAGCATCTCCTAAAGTGTGAATAAATTCTCCAGGA 97107 ||||| || |||| || ||||| || ||||| |||||||| ||||| ||||| ||| Sbjct 16980 GCATCTATATGATCCAAATAAACATGTGCATCACCTAAAGTATGAATGAATTCGCCACAG 17039 Query 97108 ACTAAATCAGTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAA 97167 | | ||| ||||| || ||||| |||||| | | ||| ||||| ||||| Sbjct 17040 TCCATATCCACCACATGTGCAATCATCTTAGTTAACAACGCGTAGGATGCAATATTAAAT 17099 Query 97168 GGCACCCCTAGTCCCATATCAGCTGATCTTTGATATAA 97205 || || |||| ||||||||| ||||||||||| || Sbjct 17100 GGTACACCTAACCCCATATCACAAGATCTTTGATACAA 17137 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346780230024440