Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20dubliniensis_20[genbank_20GCA_5F000647575.1_202014-04-23] 892 sequences; 13,998,205 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq57 170 2e-37 >seq57 Length=48952 Score = 170 bits (188), Expect = 2e-37 Identities = 286/405 (71%), Gaps = 14/405 (3%) Strand=Plus/Minus Query 20044 TTTCCCTTATTAACTACGAAACGGGTATTTTGGAAAGGCGTTGTTGAAGAGTTATTATGG 20103 ||||| |||||||| || ||| ||| |||| ||||| || || | || ||||||||| Sbjct 17611 TTTCCTTTATTAACCACTAAAAAGGTTTTTTCAAAAGGGATTATTCATGAATTATTATGG 17552 Query 20104 TTTATTAAAGGATCAACAAATTCTACCGAGCTTGTA---GAAAAAGGAGTTAAGATTTGG 20160 ||| || || || || || ||| | | || ||||| ||||| || || ||| Sbjct 17551 TTTGTTGCTGGGTCTACTGATGCTA---AAATATTAAGCGAAAAGGGAGTGAAAATCTGG 17495 Query 20161 -AGCGCACATGGATCTAAGCAATTTTTACACAGCAAT--GGATTTGACA-ACCGTCAAGA 20216 | ||| |||||||| | |||||| ||| ||| ||||| ||| | |||| || Sbjct 17494 GAAGGCA-ATGGATCTCGTGAGTTTTTAGACA--AATTAGGATT-GACTCATCGTCGTGA 17439 Query 20217 GGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGA 20276 ||||||||||| || || ||||| || ||||||||||||||||| || |||||| || Sbjct 17438 AGGGGATTTGGGACCAGTTTATGGTTTCCAATGGAGACATTTTGGTGCAGAATATAAAGA 17379 Query 20277 CATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATTTAAT 20336 | | ||||| ||| |||||| | ||||| |||||| |||||||||| | | Sbjct 17378 TTGTGATTCTGATTATAGTGGCCAAGGATTTGATCAGTTACAAGATGTTATTAAAAAATT 17319 Query 20337 TAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGTGCC 20396 ||||| || || | || ||||||||||| | | || ||||| | |||| | | Sbjct 17318 GAAAACAAATCCTTATGATAGAAGAATTATCATGTCTGCTTGGAATCCACCAGATTTTGC 17259 Query 20397 TTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGT 20441 | |||||| || |||||||||||| | | || |||||||| || Sbjct 17258 TAAAATGGCATTACCTCCATGTCATGTATTTTGTCAATTTTATGT 17214 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399179660370940