Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20dubliniensis_20[genbank_20GCA_5F000647575.1_202014-04-23]
892 sequences; 13,998,205 total letters
Query= NC_002686.2
Length=124784
Score E
Sequences producing significant alignments: (Bits) Value
seq57 170 2e-37
>seq57
Length=48952
Score = 170 bits (188), Expect = 2e-37
Identities = 286/405 (71%), Gaps = 14/405 (3%)
Strand=Plus/Minus
Query 20044 TTTCCCTTATTAACTACGAAACGGGTATTTTGGAAAGGCGTTGTTGAAGAGTTATTATGG 20103
||||| |||||||| || ||| ||| |||| ||||| || || | || |||||||||
Sbjct 17611 TTTCCTTTATTAACCACTAAAAAGGTTTTTTCAAAAGGGATTATTCATGAATTATTATGG 17552
Query 20104 TTTATTAAAGGATCAACAAATTCTACCGAGCTTGTA---GAAAAAGGAGTTAAGATTTGG 20160
||| || || || || || ||| | | || ||||| ||||| || || |||
Sbjct 17551 TTTGTTGCTGGGTCTACTGATGCTA---AAATATTAAGCGAAAAGGGAGTGAAAATCTGG 17495
Query 20161 -AGCGCACATGGATCTAAGCAATTTTTACACAGCAAT--GGATTTGACA-ACCGTCAAGA 20216
| ||| |||||||| | |||||| ||| ||| ||||| ||| | |||| ||
Sbjct 17494 GAAGGCA-ATGGATCTCGTGAGTTTTTAGACA--AATTAGGATT-GACTCATCGTCGTGA 17439
Query 20217 GGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGA 20276
||||||||||| || || ||||| || ||||||||||||||||| || |||||| ||
Sbjct 17438 AGGGGATTTGGGACCAGTTTATGGTTTCCAATGGAGACATTTTGGTGCAGAATATAAAGA 17379
Query 20277 CATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATTTAAT 20336
| | ||||| ||| |||||| | ||||| |||||| |||||||||| | |
Sbjct 17378 TTGTGATTCTGATTATAGTGGCCAAGGATTTGATCAGTTACAAGATGTTATTAAAAAATT 17319
Query 20337 TAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGTGCC 20396
||||| || || | || ||||||||||| | | || ||||| | |||| | |
Sbjct 17318 GAAAACAAATCCTTATGATAGAAGAATTATCATGTCTGCTTGGAATCCACCAGATTTTGC 17259
Query 20397 TTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGT 20441
| |||||| || |||||||||||| | | || |||||||| ||
Sbjct 17258 TAAAATGGCATTACCTCCATGTCATGTATTTTGTCAATTTTATGT 17214
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 399179660370940
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |