Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20dubliniensis_20[genbank_20GCA_5F000647575.1_202014-04-23]
892 sequences; 13,998,205 total letters
Query= NC_003027.1
Length=150773
Score E
Sequences producing significant alignments: (Bits) Value
seq243 277 2e-69
seq2 275 6e-69
>seq243
Length=19219
Score = 277 bits (306), Expect = 2e-69
Identities = 575/850 (68%), Gaps = 7/850 (1%)
Strand=Plus/Plus
Query 13901 ATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCC 13960
||||| || |||||| || || |||||||||||||||||| || || ||||| ||
Sbjct 8822 ATAACACCAGCTTTTTGGTAGTCTGAAACTCTTTTTTCAAAGAAATTGGTCTTACCAGCC 8881
Query 13961 AGTGATATATTTTCCATAAAATCAAATGGATTTGTTGACATAA-ACACTTTATCACAACC 14019
| || || |||||||| |||||||||||||| || |||| | ||||| | |||
Sbjct 8882 AAAGAAATGTTTTCCATGAAATCAAATGGATTAGTA-ACATTGTATACTTTCTTGTTACC 8940
Query 14020 TAGTTCTAATAGTAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAATT 14079
|| | || | |||||||| || | ||| ||||| |||||| |||| || | ||| ||
Sbjct 8941 TAAGGCCAACAACAATCTATCAGCGACGAATTCAATGTATTGACACATCAAGTTACAGTT 9000
Query 14080 CATACCTATTAGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGC 14139
|||||| | | || |||| || ||| || | ||||| || | | |||||
Sbjct 9001 CATACCCAACAAGGACACTGGAAGAGCATCGGTAAAGTACTCTTTCTCAACATCAACAGC 9060
Query 14140 CTCGTTTATAATAATCGTAATAATTTCATTAGAAGGAGGATATTTTAGATGTTTAAAAAT 14199
|| | ||||| | || ||| || ||| || | || | ||| ||| |
Sbjct 9061 TTCAGTAATAATTTTTTCAACAATCTCTGGAGATGGTCTGTTTTGCAAATGAGCAAACAA 9120
Query 14200 TAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGT 14259
|||||| ||||| ||| || | || |||||||| | ||| | |||||||| || ||
Sbjct 9121 TAAACAAGCAAAGTCAGTGTGTAAACCTTCATCTCTGCAAATCAACTCGTTTGAGAAAGT 9180
Query 14260 TAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAA 14319
|| |||||||| || |||| ||||| ||||| || || | ||| ||||| || |||
Sbjct 9181 CAACCCTGGCATTAAACCTCTCTTTTTCAACCAGAAGATAGAAGCAAATGAACCACTAAA 9240
Query 14320 GAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGT- 14378
||| || || |||||||||||||| || | ||||| ||| ||| || | |||| | |
Sbjct 9241 GAAAATACCTTCAACTGCAGCAAAGGCAACTAATCTTTCACCATACAAGGCTTCATCATC 9300
Query 14379 TCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAG 14438
| || |||||||| ||||||| |||| ||| |||| |||| | || | |||| |
Sbjct 9301 TTGA-ATCCATTTGATAGCCCAGTCAGCTTTCTTTTGAATACATGGAATATTGGCAATGG 9359
Query 14439 CATTAAATAAATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTAT 14498
|||||||||| | || |||| || | | ||||| || ||||| | ||| |
Sbjct 9360 CATTAAATAAGTAATCGGCTTCTTGAGGATCTTTTATGTAAGTTTCAATTAATAAAGAGT 9419
Query 14499 ACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTG 14558
| |||| || || ||||||||||| || || ||||| || || || | ||||| |
Sbjct 9420 AGGTTTCTGAATGAATGTTTTCCATCATGATTTGGAAACCGTAGAATGATTTGGCTTCGG 9479
Query 14559 ACCATTGTACCTCTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAG 14618
||| || || | | || |||| || |||||| ||| ||||||||| ||
Sbjct 9480 GAAGTTGAACTTCAGTCGAGAAGTTTTCAATTAAGTTTTCACCAACAATACCATCAGAAG 9539
Query 14619 CTGCAAAAAATGCCAATATGTTTTTAATAAAGTA---TTGCTCTTCATTGCTGAGTTTTT 14675
| || ||||||||||||| | | ||| || || | |||||| || |
Sbjct 9540 CAGCGAAAAATGCCAATACTCTAGAGACAAAATATCTTTCATTTTCATTCAATTTGTTAT 9599
Query 14676 TCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCAACAG 14735
|||| || | ||||| ||| | ||| | ||| || | ||||| ||| ||| |||
Sbjct 9600 TCCAGTCATCCAAATCTTTACTCAAATCGATTTCTTCGGCGGTCCAGAAAGAAGCTTCAG 9659
Query 14736 CTTTTTTATA 14745
|||| |||||
Sbjct 9660 CTTTCTTATA 9669
>seq2
Length=135431
Score = 275 bits (304), Expect = 6e-69
Identities = 502/727 (69%), Gaps = 10/727 (1%)
Strand=Plus/Plus
Query 13913 TTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTT 13972
||||| || ||| |||||| ||||||||||| ||||||||||| ||| || ||||||
Sbjct 59361 TTTTGGTAATCAGAAACTCTCTTTTCAAAGAAATTAGTTTTACCAGCCAAGGAGATATTT 59420
Query 13973 TCCATAAAATCAAATGGATTTGTTGACATA--AACACTTTATCACAACCTAGTTCTAATA 14030
||||| |||||||||||||| || |||| || ||||| | | || | | | ||
Sbjct 59421 TCCATGAAATCAAATGGATTAGTA-ACATTGTAATACTTTTT-ATTTCCAAAGGCCACTA 59478
Query 14031 GTAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTA 14090
||||| ||| |||| || |||| ||| || |||| || ||||||||||| || | ||
Sbjct 59479 ATAATCGATCAGCAACAAATTCAACATACTGGCACATCAAGTCACAATTCATTCCCAATA 59538
Query 14091 GTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAA 14150
||| |||| || | | ||| ||| ||| || |||| |||||||||| | || |
Sbjct 59539 AAGATACTGGAAGCGCATCGCTGAAATATTTTTTCTCAATAGTCACAGCCTCGGTAATGA 59598
Query 14151 TAATCGTAATAATTTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAA 14210
| || ||| ||||| |||||| || |||| || || | ||||| |||
Sbjct 59599 TTTTCTCAATGATTTCTGGAGAAGGTTTATTCTTTAAATACGAGAATAACAAACAGGCAT 59658
Query 14211 AATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCA 14270
|||| |||| || || |||| | ||| | ||| || |||||||| ||||||||||
Sbjct 59659 AATCCGTGTGAATCCCTTCGTCTCGGCAAATCAATTCATTCGAAAATGTCAATCCTGGCA 59718
Query 14271 TCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCT 14330
|||| || | ||| |||||||| || ||||| || || || || || ||||| || |
Sbjct 59719 TCAACCCCCTTTTCTTTAACCAGAAAATTGCTGCAAACGAACCACTGAAAAATATACCTT 59778
Query 14331 CAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGT-TCGATATCCAT 14389
|||| ||||||||||| | |||| || || || | || | | || | || |||||
Sbjct 59779 CAACGGCAGCAAACGCAACCAATCTCTCAGCATACAAAGCATCCTCGTCTTGA-ATCCAC 59837
Query 14390 TTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAA 14449
| | ||||| || | ||||| | | || || || |||||||||||||||| |||
Sbjct 59838 CTGATGGCCCAATCGGCTTTTTCTCTGATGAATGGGATATTTTCAATAGCATTAAACAAA 59897
Query 14450 TGTTC--CTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAG 14507
|| ||||| | || |||||| |||||| || || | || ||| | || |
Sbjct 59898 AAGTCCGCTTCTTCTGGGTCCTTGAA--GTATGTTTCGATTAACAACGAATAAGTCTCTG 59955
Query 14508 AGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTA 14567
| || ||||||||||| |||||||| || | | ||| |||| |||||
Sbjct 59956 AATGGATGTTTTCCATCATGATCTGAAACTTGTATACCAGTTGAGCCTCTGGTATTTGTA 60015
Query 14568 CCTCTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAA 14627
| || | | || |||| |||| || ||||| || |||||||| || ||||| |
Sbjct 60016 CTTCAGCACAGAAATTTTCCACCAAGTTCTCATTGACAATACCATCCGAGGCAGCAAAGA 60075
Query 14628 ATGCCAA 14634
|||||||
Sbjct 60076 ATGCCAA 60082
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 482340221846560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |