Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20dubliniensis_20[genbank_20GCA_5F000647575.1_202014-04-23] 892 sequences; 13,998,205 total letters Query= NC_003038.1 Length=212482 Score E Sequences producing significant alignments: (Bits) Value seq57 131 2e-25 >seq57 Length=48952 Score = 131 bits (144), Expect = 2e-25 Identities = 348/524 (66%), Gaps = 26/524 (5%) Strand=Plus/Minus Query 104103 TAATAATGAAGAAAAACAATATTTAAATTTATTAGAAAAAGTTCTTTTTCAAGGCGAAGA 104162 ||| | || |||| || |||| | |||||| ||||| || || | |||| ||| | Sbjct 17750 TAACATTGCAGAACAAGCATATCTTGATTTATGTAAAAAAATTATTGATGAAGGTGAACA 17691 Query 104163 TCGTGACGATAGAACAGGAATTGGAACTAAAAATGTATTTGG---AGAACAATTAAAATT 104219 |||| |||||||| || | || || ||| | |||| | ||| |||| ||| Sbjct 17690 TCGTCCTGATAGAACTGGTACAGGTACAAAATCACTCTTTGCTCCACCACAGTTAAGATT 17631 Query 104220 TAATTTAAGAAC--AT-CTTTTCCGTTACTAACTACaaaaaaaGTTTTTTGGAAAGGAGT 104276 | ||||| || || | ||||| ||| |||| || ||||| ||||||| ||||| | Sbjct 17630 TGATTTATCAAATGATACCTTTCCTTTATTAACCACTAAAAAGGTTTTTTCAAAAGGGAT 17571 Query 104277 TGTAGAAGAACTCTTATGGTTTATTAGCGGGAGTACAGATGTTTCTGTATTAAATCAAAA 104336 | | | ||| | ||||||||| || ||| ||| |||| | |||||| |||| Sbjct 17570 TATTCATGAATTATTATGGTTTGTTGCTGGGTCTACTGATGCTAAAATATTAAGCGAAAA 17511 Query 104337 AGGAGTTAAAATTTGGAATAAAAATGCAGAATCGT-----TTTATACACAACAAAAT--- 104388 ||||| ||||| ||| | |||| | |||| |||| ||| | | || Sbjct 17510 GGGAGTGAAAATCTGGGAAGGCAATGGATC-TCGTGAGTTTTTAGACAAATTAGGATTGA 17452 Query 104389 --CTTTTTaaaaaaaaTGATTTAGGACCTATTTATGGTTTTCAGTGGAGACATTATGGTG 104446 | | | || ||||| ||||| |||||||||| || |||||||||| ||||| Sbjct 17451 CTCATCGTCGTGAAGGGGATTTGGGACCAGTTTATGGTTTCCAATGGAGACATTTTGGTG 17392 Query 104447 AAAATTATATTGGGTGCGATAATAAATATGGTGGTATAG------ATCAACTCAAAAATA 104500 | | |||| | || ||| | | ||| |||| || |||| | || || Sbjct 17391 CAGAATATAAAGATTGTGATTCTGATTATAGTGGCCAAGGATTTGATCAGTTACAAGATG 17332 Query 104501 TTATTACAACAATTCAAAATGAA-CCTTGGGATAGAAGAATGATATTATTAGCTTGGAAC 104559 |||||| || |||| |||| || |||| ||||||||||| || | | |||||||| Sbjct 17331 TTATTAAAA-AATTGAAAACAAATCCTTATGATAGAAGAATTATCATGTCTGCTTGGAAT 17273 Query 104560 CCAAAGGATAATTCTAAAATGGCACTTCCTCCTTGTCATTGTAT 104603 ||| ||| | ||||||||||| | ||||| ||||| ||||| Sbjct 17272 CCACCAGATTTTGCTAAAATGGCATTACCTCCATGTCA-TGTAT 17230 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 679806820069440