Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20dubliniensis_20[genbank_20GCA_5F000647575.1_202014-04-23] 892 sequences; 13,998,205 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq38 387 2e-102 seq243 302 6e-77 seq2 190 3e-43 seq31 125 9e-24 >seq38 Length=58422 Score = 387 bits (428), Expect = 2e-102 Identities = 1333/2067 (64%), Gaps = 29/2067 (1%) Strand=Plus/Plus Query 62085 TAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTG 62144 || ||||| || || || | ||| |||| || || ||||||||||| || | || Sbjct 21200 TAATACATACCAGTCTTCAAACCTTTCTTCCAACCATAGAAATGCATACTGGTCAACTTA 21259 Query 62145 GAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCC 62204 | || ||| || || || || | |||||| |||||| || || || | Sbjct 21260 CCCATTGTTGGGTCTTTGATGTGAATGTTTAATGATTGAGATTGATCAATAAATGCAGCT 21319 Query 62205 CTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGCAATTTCCCAAATAGTTTTATAAACT 62264 || || |||||||| | || || |||||||| |||||||| | ||| || || | | Sbjct 21320 CTATCAGCAGCCATGTCGATAATATGCTTTTGTGAGATTTCCCAGACAGTCTTGTACAAT 21379 Query 62265 CGCTTAATATCTTCTGGAAGGTTTGT---ATTCTGAATGGATCCACCATCTACCATAATC 62321 |||||| || || |||| ||||| | ||||| || || | | ||||| Sbjct 21380 GCCTTAATTTCATCAGGAATGTTTGGCAAAGCTTGAATAGAACCGTTGTTAGCAATAATA 21439 Query 62322 CTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGG 62381 ||| | || || |||||||||| | || ||| | | | | || || Sbjct 21440 CTACTTTTCATAGCATCATTCCAGACACCCAAATCAACCAAATCCTTCAACAAATATGGA 21499 Query 62382 TTAACTACTTGGAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGT 62441 || || | ||| |||||||| | || ||||| | | |||||| ||| || || ||| Sbjct 21500 TTGACAATTTGAAATTCTCCTGCTAACACTCTTCTGGAGTAAATGTTAGAAGTGTATGGT 21559 Query 62442 TCCACCGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACC 62501 || | ||||||| || ||||||||||| | || || ||||| ||||| || || || Sbjct 21560 TCGAAACACTCATTGTTACCCAAAATTTGTGATGTAGAAGCAGTAGGCATTGGAGCAACT 21619 Query 62502 AATAAACTATTTCTAAGACCGTATGTTCTG--ATTTTATCTTTTAGATGT-TCCCAATTC 62558 ||||| ||||| | ||| ||| | | | || | ||||| |||| ||||||| | Sbjct 21620 AATAAGGAGTTTCTCATACC--ATGCTTAGCCAAATTTTGTTTTA-ATGTATCCCAATCC 21676 Query 62559 CAAAGATCCGACGGTACAACANNNNNNNNNNNATATTGTAGAATACCGTTACTGGCGTAC 62618 || | || | ||| | | |||| | ||| | | ||| Sbjct 21677 CATAATTCAGTTGGTTTTCTGTTCCATAAATCAAACTGTAATAAACCTTGAGAGGCAGGG 21736 Query 62619 GATCCTACATATGTATCATATGGTCCTTCCTTCTCAGCTAGTTTACAACTCGCCTCTAAT 62678 || ||| ||| || || || | ||||| | | ||| | || | | || || | Sbjct 21737 GAGCCTGGATAAGTTTCGTAGGCACCTTCTTCTTTAGCCAATTCAACAGAAGCTTCAACA 21796 Query 62679 GCACCGTAATAAATGGTTTCAAAGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTATCA 62738 ||| | | ||||| || || || || | | |||| ||| ||||| || ||| Sbjct 21797 GCAGCATGGTAAATAGTCTCGAAAATTTGAATGTTTAATTCTCTGGCTTCTTGGGAGTCA 21856 Query 62739 AATGGATAATTT-AAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGG 62797 ||||| |||| | || ||||| || || || || ||||||||||| | | | || || Sbjct 21857 AATGG-TAATCTCAATTCCATAAAGGCATCAGCCAAACCTTGAACACCCAAAGCAATTGG 21915 Query 62798 TCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAAT 62857 ||| |||||| |||| || |||| |||||||||| || |||| || || |||| Sbjct 21916 TCTGTGTCTCATATTTGATCTTTCGGCTTCTGGAACTGGGTAATGGTTGCGGTCAATAAC 21975 Query 62858 TTTATTGAGATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAAT-----CA 62912 | | || | || | | | ||| ||| ||||| | | || ||| | || Sbjct 21976 TCTGTTCAAGTTACGGGTGACTACCTTGGTGACATCATGTAACTTATCAAAGTTGTACCA 22035 Query 62913 AATCGCCC----ATCTATTACAA-ACATGTTC--AATGCAACAGATGCCAGATTACACAC 62965 | | | ||| || ||| | ||| | || |||| || |||| ||||| || Sbjct 22036 AGTATTACTTTGATCGCTTTCAACAAATGATGGTAAAGCAATGGAGGCCAAGTTACAAAC 22095 Query 62966 GGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGAT 63025 || || |||| | | | | ||||| | || ||| || | || | | || || Sbjct 22096 AGCGACTTCATCTGGAGCAGAATATTCAACAATTTCACAACATAAGTTGGAAGATTTAAT 22155 Query 63026 AGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGG 63085 | | || || || | ||| || || |||||||| | ||| || || | || ||||| Sbjct 22156 AATACCCAAGTTCTTTTGGTTGGATTTGTTGTTACATGAATCTTTGTACAACATAAATGG 22215 Query 63086 AGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTAT 63145 |||||| ||||| | || | | | | || || | ||| | | | ||||| || | Sbjct 22216 AGTACCCGTTTCTGTTTGGGCTCCCAAGATAGCGTACCACAATTTTTGGGCCTTGATGGT 22275 Query 63146 AGATTTGTATCTCCTTTCTCTTTCGTATAGAGTATACAATCGTTCGAACTCGTCTCCCCA 63205 | || | ||||| |||||||| ||||| ||| |||||| ||||| || | Sbjct 22276 CTGTCTGCCACGGTTTTCTTTTTCGTATCTGGTATATAATTCTTCGAATTCGTCACCGTA 22335 Query 63206 AACATTGTCCAATCTAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTT 63265 ||||| |||| | || |||| || | | ||| | ||| || |||| | | Sbjct 22336 AACATCAGCCAAACCTGGGGCCTCATTTGGTGAGAACAAAGTCCAATCACCGTTTTGTTC 22395 Query 63266 CACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCTATG 63325 |||| |||||| || | || |||||||| | |||| || | |||||| | ||| Sbjct 22396 GACTCTTTTCATGAACAAGTCTGGAATCCATAAAGCTGGGAACAAATCTCTGGCTCTGAT 22455 Query 63326 TTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGG 63385 ||| || || || ||||||| | | || | ||| | | || ||| ||||| || Sbjct 22456 TTCTTCTTTACCATGATTCTTTCTGATGTCAATGAAATCAAAGATGTCACTGTGCCATGG 22515 Query 63386 TTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGC 63445 ||| ||||| | ||| | | ||||| | |||||| || || ||||| | || | || Sbjct 22516 TTCTAAGTACAAGGCAAAGGCACCAGGTCTTTTGTTACCACCTTGATCAACATAACGTGC 22575 Query 63446 GGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGA 63505 |||||||| | ||||| | ||||||||||||||| || || ||||||||||||| | Sbjct 22576 AGTGTTATTGAACACTCTTACCATTGGAATAATACCATTAGAAGTACCATTGGTACCAGC 22635 Query 63506 GATATAGCCTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTT 63565 || || | ||| | | |||||| || || || ||| || || ||||| |||| Sbjct 22636 AATGTAAGCACCAGTAGAACGAATGTTGTGGATATGTAAACCAATCCCTCCTGCACTTTT 22695 Query 63566 AGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCAT 63625 || || || || || |||||| || ||||| || ||||| || |||||| |||| Sbjct 22696 TGAAATCAAAGCACACGATTTTAAAGTATCATATATACCTTCAATAGAATCATCCTTCAT 22755 Query 63626 GTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGG 63685 ||| | || || |||||||||| | | | || || ||||| || ||| ||| Sbjct 22756 AGCAAGCAAGAAGCATGAAGACATTTGGGGTCTTGGTGTACCAGCATTGAACAAGCAAGG 22815 Query 63686 AGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTAT 63745 |||| | || ||||| || ||| ||| | | || || || ||||| || ||| Sbjct 22816 AGAACCATGGGTAAAGAATCTTTGAGACATCAAGTTATAGGTTTCAATGACTCTTGGTAT 22875 Query 63746 ATCCCATT--GATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACA 63803 || |||| || || || || ||||| | ||| | || || || |||||||| || Sbjct 22876 AT--CATTACCGTGGATACCAACAGCGACTCTCATGATCAAATGTTGGGGTCTTTCGGCA 22933 Query 63804 ATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTG 63863 | || ||| || ||||| || ||| ||||||||||||| || |||||||| ||| Sbjct 22934 ACCTTACCGTTGATACGTAACAAATAAGATCTTTCCAAAGTTTTGAACCCAAAATAATTG 22993 Query 63864 TATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGCTTATCCTTATATTTGTTAACT 63923 || ||| |||| ||||||| ||| |||| || | | ||| | | || ||| Sbjct 22994 TAGCTAAAATCTCTGTCGTAAACAATGGCCGAGTTTAATTCATCTTCGTGTTCCATAATA 23053 Query 63924 ATATCCATGGTAATACTT-GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATA 63982 || | ||| | | ||| ||||| || ||||| || |||| | |||||||||| ||| Sbjct 23054 ATGT-CATAGGTTTCCTTGGAAATCATAGGAGAGTGCAACCCAGTCTTAGGATTAATATA 23112 Query 63983 GTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGA 64042 | ||||||||| |||| | | |||| | |||| |||||||| |||||| Sbjct 23113 CTCATATAAATCCTTAGATACTTTGGAATACTGTTTGGTGGTTTGCTTGTGTAAATTTGA 23172 Query 64043 TATGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGC 64102 || ||| ||||| ||||||| | |||||||| ||||| ||| || || || || Sbjct 23173 TACGGCAATTCTAGCGGCTAACACAGCATAATCAGGATGAATTGTTGTCATTGTAGCAGC 23232 Query 64103 TATTTCGGCTGCCAGAGTGTCCAATTC 64129 ||||| || |||| | ||||| || Sbjct 23233 AATTTCTGCAGCCAAGTTATCCAACTC 23259 >seq243 Length=19219 Score = 302 bits (334), Expect = 6e-77 Identities = 601/889 (68%), Gaps = 6/889 (1%) Strand=Plus/Plus Query 33278 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTC 33337 |||||| || ||||||||| || || | |||||| || ||||| || || || | Sbjct 8821 CATAACACCAGCTTTTTGGTAGTCTGAAACTCTTTTTTCAAAGAAATTGGTCTTACCAGC 8880 Query 33338 CAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCC 33397 ||| || || ||||||||||||||||| ||||| ||||||||||| | ||| || || Sbjct 8881 CAAAGAAATGTTTTCCATGAAATCAAATGGATTAGTAACATTGTATACTTTCTTGTTACC 8940 Query 33398 CAATTCAGAAATCAATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATT 33457 || | | | ||||||||| ||||||||||| || ||| ||||| | ||| || Sbjct 8941 TAAGGCCAACAACAATCTATCAGCGACGAATTCAATGTATTGACACATCAAGTTACAGTT 9000 Query 33458 CATTCCTATGAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATACCGC 33517 ||| || | | ||||||||||| | |||| | |||| |||| || || Sbjct 9001 CATACCCAACAAGGACACTGGAAGAGCATCGGTAAAGTACTCTTTCTCAACATCAACAGC 9060 Query 33518 ATTTGTTATAATAAATCTAACGGTTTCTTCACTCGGTGGATGTAATAAATGTTTAAACAT 33577 | || ||||| | ||| | ||| | ||| | | ||||| ||||| Sbjct 9061 TTCAGTAATAATTTTTTCAACAATCTCTGGAGATGGTCTGTTTTGCAAATGAGCAAACAA 9120 Query 33578 CAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGT 33637 ||||| || || || ||| | ||| || ||||| | ||| || ||||| || || || Sbjct 9121 TAAACAAGCAAAGTCAGTGTGTAAACCTTCATCTCTGCAAATCAACTCGTTTGAGAAAGT 9180 Query 33638 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAA 33697 | || ||||||| || | |||||| | ||| || || ||||| ||||| || ||| Sbjct 9181 CAACCCTGGCATTAAACCTCTCTTTTTCAACCAGAAGATAGAAGCAAATGAACCACTAAA 9240 Query 33698 GAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCA-- 33755 ||| || ||||| |||||||||||||||| | ||| || ||||| ||| ||| Sbjct 9241 GAAAATACCTTCAACTGCAGCAAAGGCAACTAATCTTTCACCATACAAGGCTTCATCATC 9300 Query 33756 -TGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGC 33814 || ||||| || |||||| || || ||||||| | ||| || || | | ||||| Sbjct 9301 TTGAATCCATTTGATAGCCCAGTCAGCTTTCTTTTGAATACATGGAATATTGGCAATGGC 9360 Query 33815 ATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATA 33874 |||||| | || | ||| | | |||||| | ||||| || || || | | || Sbjct 9361 ATTAAATAAGTAATCGGCTTCTTGAGGATCTTTTATGTAAGTTTCAATTAATAAAGAGTA 9420 Query 33875 CATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGT 33934 |||| |||||||||||||| || || || || |||||||| || | || |||| Sbjct 9421 GGTTTCTGAATGAATGTTTTCCATCATGATTTGGAAACCGTAGAATGATTTGGCTTCGGG 9480 Query 33935 AATCTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGC 33994 || || ||||| || | || ||| ||| |||||| || || |||||| || Sbjct 9481 AAGTTGAACTTCAGTCGAGAAGTTTTCAATTAAGTTTTCACCAACAATACCATCAGAAGC 9540 Query 33995 TGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGT---TTATT 34051 || ||||| |||||||| | ||||||| |||| | | | | | ||||| Sbjct 9541 AGCGAAAAATGCCAATACTCTAGAGACAAAATATCTTTCATTTTCATTCAATTTGTTATT 9600 Query 34052 CCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGC 34111 ||| |||| | ||||||| | ||| | |||||| | ||||| || || || || || Sbjct 9601 CCAGTCATCCAAATCTTTACTCAAATCGATTTCTTCGGCGGTCCAGAAAGAAGCTTCAGC 9660 Query 34112 CTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACA 34160 || ||||| | ||||| || ||||| ||| ||||||||| || ||| Sbjct 9661 TTTCTTATAAAAGTTCCAAATTTCATGGTATCTGATTGGGAACATCACA 9709 >seq2 Length=135431 Score = 190 bits (210), Expect = 3e-43 Identities = 549/838 (66%), Gaps = 10/838 (1%) Strand=Plus/Plus Query 33291 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33350 |||||||| ||| || | ||||| || ||||||||||| || |||| || |||||| Sbjct 59361 TTTTGGTAATCAGAAACTCTCTTTTCAAAGAAATTAGTTTTACCAGCCAAGGAGATATTT 59420 Query 33351 TCCATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCCCAA-TTCAGAAAT 33409 |||||||||||||| ||||| |||||||||||| |||||| ||| || || ||| Sbjct 59421 TCCATGAAATCAAATGGATTAGTAACATTGTAATACTTTTTATTTCCAAAGGCCACTAAT 59480 Query 33410 CAATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATGAG 33469 |||| ||| || || ||||| | ||| ||||| |||||||||||||| | | Sbjct 59481 -AATCGATCAGCAACAAATTCAACATACTGGCACATCAAGTCACAATTCATTCCCAATAA 59539 Query 33470 TTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATACCGCATTTGTTATAAT 33529 |||||||| || | | | | ||| || ||||| | || || | || || || Sbjct 59540 AGATACTGGAAGCGCATCGCTGAAATATTTTTTCTCAATAGTCACAGCCTCGGTAATGAT 59599 Query 33530 AAATCT-AACGGTTTCTTCACTCGGTGGATGTAATAAATGTTTAAACATCAAACATGCGA 33588 ||| || | ||||| | ||| || ||||| || | |||||| || Sbjct 59600 -TTTCTCAATGATTTCTGGAGAAGGTTTATTCTTTAAATACGAGAATAACAAACAGGCAT 59658 Query 33589 AATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCA 33648 |||| ||| | || ||||||| | ||| ||||| || ||||| || | ||| |||| Sbjct 59659 AATCCGTGTGAATCCCTTCGTCTCGGCAAATCAATTCATTCGAAAATGTCAATCCTGGCA 59718 Query 33649 TTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTT 33708 | | || | || || | ||| || || | || || || || || || || |||| Sbjct 59719 TCAACCCCCTTTTCTTTAACCAGAAAATTGCTGCAAACGAACCACTGAAAAATATACCTT 59778 Query 33709 CTACTGCAGCAAAGGCAATAAGTCTCTCTCCAT---AACCGGCGCTGTCATGTATCCACT 33765 | || |||||||| |||| | |||||| ||| || | | ||| || |||||| Sbjct 59779 CAACGGCAGCAAACGCAACCAATCTCTCAGCATACAAAGCATCCTCGTCTTGAATCCACC 59838 Query 33766 TTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGAT 33825 | ||||||||||| || | | | | | || || |||| || |||||||| | | Sbjct 59839 TGATGGCCCAATCGGCTTTTTCTCTGATGAATGGGATATTTTCAATAGCATTAAACAAAA 59898 Query 33826 AGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAAT 33885 ||| ||| | || || | || || ||||| || | ||| | || |||| Sbjct 59899 AGTCCGCTTCTTCTGGGTCCTTGAAGTATGTTTCGATTAACAACGAATAAGTCTCTGAAT 59958 Query 33886 GAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTT 33945 | |||||||| || |||||||| ||| | | |||||| | || || |||| Sbjct 59959 GGATGTTTTCCATCATGATCTGAAACTTGTATACCAGTTGAGCCTCTGGTATTTGTACTT 60018 Query 33946 CTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGCAAAAAACG 34005 | | ||| || ||| | || || ||||| || || ||||| ||| ||||| || | Sbjct 60019 CAGCACAGAAATTTTCCACCAAGTTCTCATTGACAATACCATCCGAGGCAGCAAAGAATG 60078 Query 34006 CCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTA---TTCCAATCATTGA 34062 |||| || | || ||| || |||| | | | | |||| ||||| || | Sbjct 60079 CCAACACTCGGGAGATGAAAAATCTTTCATTTTCGTTCATTTTATTGTTCCAGTCGGCCA 60138 Query 34063 TATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATA 34120 ||||||| || || | ||||| |||||||||| || ||| | |||||| || Sbjct 60139 AATCTTTACTTAAGTCAAGCTCTTCAGCTGTCCAAAACGAGGCCAACGACTTTTTGTA 60196 >seq31 Length=62326 Score = 125 bits (138), Expect = 9e-24 Identities = 898/1424 (63%), Gaps = 50/1424 (4%) Strand=Plus/Minus Query 62166 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 62225 || ||||||||| ||| |||||| | || ||| || ||||||||||| | ||| Sbjct 2531 TGTATATTCATACTTTGCAGTTGATCAACAAATTTTCCTCTATCTGCAGCCATATCAATG 2472 Query 62226 ATCGTCTTTTGTGCAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 62285 ||| ||||||| | |||||| | |||||||| | | | || || || || || | Sbjct 2471 ATCACTTTTTGTGACAATTCCCACACGGTTTTATATAATTGTTTGATTTCGTCAGGTATA 2412 Query 62286 TTTG---TATTCTGAATGGATCCACCATCTACCATAATCCTATTCTTGATCTCATCATTC 62342 || | | || ||||| |||||| || | |||||| |||| | || | || | Sbjct 2411 TTGGGTATTTTTTGAATTGATCCATTTTCCATAATAATCTTATTTCTCATAGCTGAATCC 2352 Query 62343 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGGTTAACTACTTGGAATTCTCCA 62402 || | | || ||||| || ||| | || | ||| || | ||| ||||||| Sbjct 2351 CAAATTCCAAGATCCATTAAATCTTTAATTAAATACTTGTTGACAATTTGATATTCTCCC 2292 Query 62403 GACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATTTCCC 62462 | || |||| ||| | || | || ||||| || || | | ||||| ||| Sbjct 2291 GCTAACACTCGACGATTATACAAGTTTGAAGTATAAGGCTCAAAGCATTCATTGAATCCA 2232 Query 62463 AAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCG 62522 | |||||| | ||||||||| |||||||| || || || | ||| ||||| | ||| Sbjct 2231 AGAATTTGGGAAGTTGATGCCGTCGGCATCGGAGCTACTAGTAATGAGTTTCTTAAACCA 2172 Query 62523 TATGTTCTGATTTTATCTTTTAGATGTTCCCAATTCCAAAGATCCGAC--GGTACAACAN 62580 | || || || || |||| | | ||||| || | || || || | | Sbjct 2171 AAATTTTGAATGTTGTCCTTTAAAGCATTCCAAT--CATACATTGGAGAAGGCTTATGAT 2114 Query 62581 NNNNNNNNNNATATTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCATATG 62640 | | |||| || || || || ||| || |||| ||||||| Sbjct 2113 TCCACATATCAAACTGTAATATCCCATTTGATGCCGGCGAGCCCTGGAATGTTTCATATG 2054 Query 62641 GTCCTTCCTTCTCAGCTAGTTTACAACTC--GCCTCTAATGCACCGTAATAAATGGTTTC 62698 | || || ||| || | || ||||| ||||| | |||| | | || || ||||| Sbjct 2053 GGCCCTCTTTCATTGCCAATT--CAACTGAGGCCTCAAGTGCAGCATGGTATATAGTTTC 1996 Query 62699 AAAGATCTTCTTATTTAGATCTTGT-GC--TTCCGGGCTATCAAATGGATAATTTAAGAG 62755 ||| |||| |||||| || || | || || | | |||||| || |||| ||| Sbjct 1995 AAATATCTGAATATTTA-ATGTTTTAGCCATTGCAGA--ATCAAAAGG-TAATCGAAGCT 1940 Query 62756 AAT-AAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAG 62814 | |||| || || || ||||| ||||| | | | || || | ||||||||||| | Sbjct 1939 CAGCAAACAAATCTGCCAAGCCTTGTACACCCAAAGCAATTGGACGGTGTCTCTTATTTG 1880 Query 62815 AGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCT-G 62873 | ||| || | || |||||| | | | ||| || | ||| || | ||| || | Sbjct 1879 AATATTCTGCCGTTTTAACAGGATATTTTGTTACATCAATCACTTTGTTCAAATTCCTTG 1820 Query 62874 ACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATC-----GCC-CATCTAT- 62926 ||| |||||| ||| | || ||| |||||||||| || | ||| | Sbjct 1819 TCAAG-ACTTTGGTGACAGAGTGCAATTTTTCAAAATCAAATGCAATGGCATCCTCTGTG 1761 Query 62927 ---TACAAACATGTT--CAATGCAACAGATGCCAGATTACACACGGCTACCTCATTAGCA 62981 | |||| |||| |||||||| ||| || | ||| ||||| || || | | Sbjct 1760 GTTTTCAAATATGTAGGCAATGCAAGAGACGCTAAATTGCACACAGCAGTTTCTTCTGGT 1701 Query 62982 TCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGT 63041 | ||||| | || || || | ||| | |||| || || || | |||| | Sbjct 1700 GATGAATATTCAACAATTTCGCAACACAAATTTGAAGACTTTATTGTCCCGATGTTTTTT 1641 Query 63042 TGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATC 63101 || || ||| ||||||| || || || || || || | ||| ||| |||||| | Sbjct 1640 TGGTTTGATTTTGTGTTACAGGCGTCTTTGTATAGCATATAAGGACCACCTGTTTCAGTT 1581 Query 63102 TGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCCTT 63161 ||||||| | ||| ||| ||| | | | | | | | || | ||||| | Sbjct 1580 TGAGATTGCAAAATGGCTAGCCACA--ATTTGTG--TGCACTA-ACTTTTGTTCCAAAAC 1526 Query 63162 TCTCT--TTCGTATAGAGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAAT- 63218 |||| ||| ||| ||| ||| ||| || || ||| ||| ||| ||| | Sbjct 1525 CCTCTGATTCATATTTGCAATATAATTTTTCAAATTC--CTCACCATACAC-GTCACTTA 1469 Query 63219 --CTAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCA 63276 | | || ||||| || | | ||| | ||| || | || ||||| ||||||| Sbjct 1468 GACCAAGAGCTTCATTGGGCGAAAACAAAGTCCAGTCAGAATTGTCTTTCACACGTTTCA 1409 Query 63277 TAAAGAGATCAGGAATCCAAAGAGCTAT-AAATAGATCTCTTGTTCTATGTTCCTCGTTT 63335 |||| | || || ||||| | | | || ||| | |||||| ||||| ||| || || Sbjct 1408 TAAACAAGTCGGGTATCCATA-ATCCATAAAACAAATCTCTAGTTCTCATTTCTTCATTC 1350 Query 63336 CCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTAT 63395 || ||| ||| | | || | || | | ||||||| |||||| ||||| | ||| Sbjct 1349 CCGTGATTTTTTCTCATTTCTAAGATATCAAAAATATCACCATGCCATGGTTCTATATAT 1290 Query 63396 ATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTA 63455 ||||| | |||| || ||||| || || ||||| | ||||| || || ||||| Sbjct 1289 ATGGCAAATGCTCCTGGACGTTTACCCCCACCTTGATCGACATATCTTGCAGTATTATTG 1230 Query 63456 TAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCCT 63515 ||||| | |||||| || | | |||||||| |||||||||| || | ||||| | Sbjct 1229 TAAACACGCAACATGGGTACTAACCCGTTTGAACTACCATTGGTGCCAGCAATATACGCA 1170 Query 63516 CCACTGGCACGAATATT-ACTAATTGATAGACCTATTCCCCCTG 63558 ||| ||| | |||||| | ||| | ||||||||| |||| Sbjct 1169 CCATTGGATCTAATATTGTGCACATGA-ATACCTATTCCTCCTG 1127 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629810577533760