Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20dubliniensis_20[genbank_20GCA_5F000647575.1_202014-04-23] 892 sequences; 13,998,205 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq65 102 5e-17 >seq65 Length=44577 Score = 102 bits (112), Expect = 5e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 33141 CACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAG 33200 |||| |||||||| | ||| ||||| ||||| || || || ||||| || ||||| |||| Sbjct 11343 CACCACCTCTTAATCTCAAGACCAAGTGCAAAGTAGATTCCTTTTGGATGTTGTAGTCAG 11402 Query 33201 ACAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGG 33260 | ||| | ||| |||||||| || ||| ||| ||||| | ||| ||||| | | Sbjct 11403 ATAAAGTTCTACCGTCTTCCAATTGTTTACCAGCAAAAATTAATCTTTGTTGGTCTGGTG 11462 Query 33261 GTATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAA 33320 | || |||||||| || ||| || || | | ||| ||||| | || || Sbjct 11463 GAATACCTTCTTTGTCTTGAATTTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAA 11522 Query 33321 CGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 | || | ||| || ||||| || || | || || |||||||||||||| Sbjct 11523 CTTCTAAAGTAATGGTTTTACCAGTTAAGGTCTTGACGAAAATTTGCAT 11571 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318774134489016