Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20dubliniensis_20[genbank_20GCA_5F000647575.1_202014-04-23]
892 sequences; 13,998,205 total letters
Query= NC_005179.1
Length=134721
Score E
Sequences producing significant alignments: (Bits) Value
seq243 259 4e-64
seq2 183 3e-41
>seq243
Length=19219
Score = 259 bits (286), Expect = 4e-64
Identities = 574/848 (68%), Gaps = 25/848 (3%)
Strand=Plus/Plus
Query 12859 TTTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATT 12918
|||||| || || ||||||||||||||| || || || || || | || ||||| ||
Sbjct 8833 TTTTTGGTAGTCTGAAACTCTTTTTTCAAAGAAATTGGTCTTACCAGCCAAAGAAATGTT 8892
Query 12919 TTCCATAAAATCGAAAGGATTTTTCGAACAATAGTAT---TTTTTACACCCTAATTCTAG 12975
|||||| ||||| || ||||| | |||| | |||| || || ||||| | |
Sbjct 8893 TTCCATGAAATCAAATGGATTAGT--AACATT-GTATACTTTCTTGTTACCTAAGGCCAA 8949
Query 12976 TAACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATCACAGTTCATTCCTAT 13035
|||||||| ||||| || || || ||||| || ||| || | ||||||||| || |
Sbjct 8950 CAACAATCTATCAGCGACGAATTCAATGTATTGACACATCAAGTTACAGTTCATACCCAA 9009
Query 13036 TAATTTTACAGGCATAGCTTCTGTTAAAAAGtttttttCTATATCAACTGCTTCGATAAC 13095
|| || || | ||| || || || | | ||| || | |||||| ||||| |||
Sbjct 9010 CAAGGACACTGGAAGAGCATCGGTAAAGTACTCTTTCTCAACATCAACAGCTTCAGTAAT 9069
Query 13096 TATGTCTCTTATTACGTTCTCTA---ATGGAGGATTTGATAGATGCTTAAACATCATACA 13152
|| | | | | || ||||| |||| ||| | ||| ||||| | |||
Sbjct 9070 AATTTTT-TCA--ACAATCTCTGGAGATGGTCTGTTTTGCAAATGAGCAAACAATAAACA 9126
Query 13153 TGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACC 13212
||||| ||| ||| || ||||||||||| | || | ||||||||| || || | ||
Sbjct 9127 AGCAAAGTCAGTGTGTAAACCTTCATCTCTGCAAATCAACTCGTTTGAGAAAGTCAACCC 9186
Query 13213 CGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTAT 13272
||||| | |||| ||||| | ||| || |||| |||||| ||||| ||| || ||
Sbjct 9187 TGGCATTAAACCTCTCTTTTTCAACCAGAAGATAGAAGCAAATGAACCACTAAAGAAAAT 9246
Query 13273 TCCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATACGTACTATTTTTACTC-TCTA 13331
||||||||||| ||||| || | || |||||||||||| | || | || | |
Sbjct 9247 ACCTTCAACTGCAGCAAAGGCAACTAATCTTTCACCATAC-AAGGCTTCATCATCTTGAA 9305
Query 13332 TCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCATATTTTCTATTGCGTTAA 13391
|||| || | ||||||| ||||| | || || || ||||| | || || ||||
Sbjct 9306 TCCATTTGATAGCCCAGTCAGCTTTCTTTTGAATACATGGAATATTGGCAATGGCATTAA 9365
Query 13392 ATAAATAAtttttttCCTTACTGTCTAAAATATAAGTATCTATCAATAAGCTATACATTT 13451
|||| |||| ||| | | ||| || ||||| || || ||||| || |||
Sbjct 9366 ATAAGTAATCGGCTTCTTGAGGATCTTTTATGTAAGTTTCAATTAATAAAGAGTAGGTTT 9425
Query 13452 CTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGATACCT 13511
|||||||||| ||||||||| ||||||||||| || || || | || || | | |
Sbjct 9426 CTGAATGAATGTTTTCCATCATGATTTGGAAACCGTAGAATGATTTGGCTTCGGGAAGTT 9485
Query 13512 GAACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAGCAGCaa 13571
||||||| | | || |||| ||||||||| ||| || || ||| |||||| |
Sbjct 9486 GAACTTCAGTCGAGAAGTTTTCAATTAAGTTTTCACCAACAATACCATCAGAAGCAGCGA 9545
Query 13572 aaaaaGCAAGTATGTGCT-TA---ATAAAttttttttCGTTTTCTGACAACT--TTA-AC 13624
|||| || | || || || | ||| | | |||| ||||| ||| | ||| |
Sbjct 9546 AAAATGCCAATA----CTCTAGAGACAAAATATCTTTCATTTTCATTCAATTTGTTATTC 9601
Query 13625 CAATCTGGAAAATCTTTTGATAAATCTACCTCCTCAACGGTCCAAAAAGAAGCAACAGCC 13684
|| || |||||||| ||||| | || || ||||||| |||||||| ||||
Sbjct 9602 CAGTCATCCAAATCTTTACTCAAATCGATTTCTTCGGCGGTCCAGAAAGAAGCTTCAGCT 9661
Query 13685 TTCTTATA 13692
||||||||
Sbjct 9662 TTCTTATA 9669
>seq2
Length=135431
Score = 183 bits (202), Expect = 3e-41
Identities = 485/729 (67%), Gaps = 20/729 (3%)
Strand=Plus/Plus
Query 12860 TTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATTT 12919
||||| || || |||||| |||||||| || || ||||| || | || || ||||||
Sbjct 59361 TTTTGGTAATCAGAAACTCTCTTTTCAAAGAAATTAGTTTTACCAGCCAAGGAGATATTT 59420
Query 12920 TCCATAAAATCGAAAGGATTTTTCGAACA--ATAGTATTTTTTACACCCTAATTCTAGTA 12977
||||| ||||| || ||||| | |||| || || |||||| || || | | ||
Sbjct 59421 TCCATGAAATCAAATGGATTAGT--AACATTGTAATACTTTTTATTTCCAAAGGCCACTA 59478
Query 12978 ACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATCACAGTTCATTCCTATTA 13037
| |||| ||||||||||| || | ||||| ||| || ||||| |||||||| | ||
Sbjct 59479 ATAATCGATCAGCAACAAATTCAACATACTGGCACATCAAGTCACAATTCATTCCCAATA 59538
Query 13038 ATTTTACAGGCATAGCTTCTGTTAAAAAGtttttttCTATATCAACTGCTTCGATAACTA 13097
| ||| || | || || | ||| | ||||| || ||| || || ||| ||| |
Sbjct 59539 AAGATACTGGAAGCGCATCGCTGAAATATTTTTTCTCAATAGTCACAGCCTCGGTAATGA 59598
Query 13098 TGTCTCTTATTACGTTCTCTA-ATGGAGGATTTGATAGATGCTTAAACATCATACATGCA 13156
| | ||| | | |||| | | || ||| || || | || | || ||| |||
Sbjct 59599 T-TTTCTCAATGATTTCTGGAGAAGGTTTATTCTTTAAATACGAGAATAACAAACAGGCA 59657
Query 13157 AAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCCGGC 13216
|||| ||| | ||||| |||| | || | || || |||||||| | || |||
Sbjct 59658 TAATCCGTGTGAATCCCTTCGTCTCGGCAAATCAATTCATTCGAAAATGTCAATCCTGGC 59717
Query 13217 ATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTATTCCT 13276
|| | ||| | ||| || | ||| || || || ||||||||||| |||||||| |||
Sbjct 59718 ATCAACCCCCTTTTCTTTAACCAGAAAATTGCTGCAAACGAACCACTGAAAAATATACCT 59777
Query 13277 TCAACTGCTGCAAACGCTATCAACCTTTCACCATACGTACTATTTTTACTC-TCT---AT 13332
||||| || |||||||| | ||| || ||| ||||| | | | ||| ||| ||
Sbjct 59778 TCAACGGCAGCAAACGCAACCAATCTCTCAGCATACAAAGCA----TCCTCGTCTTGAAT 59833
Query 13333 CCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCATATTTTCTATTGCGTTAAA 13392
|||| | ||||||| | ||||||| | | | | | |||||||| || || |||||
Sbjct 59834 CCACCTGATGGCCCAATCGGCTTTTTCTCTGATGAATGGGATATTTTCAATAGCATTAAA 59893
Query 13393 TAAATAAtttttttCCTTACTGTC--TAAAATATAAGTATCTATCAATAAGCTATACATT 13450
||| | | ||| | ||| | || ||| || || || || || ||| |
Sbjct 59894 CAAAAAGTCCGCTTCTTCTGGGTCCTTGAAGTAT--GTTTCGATTAACAACGAATAAGTC 59951
Query 13451 TCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACA-TCTAGCCTCTGATAC 13509
|||||||| || ||||||||| || | ||||| | | || | |||||||| ||
Sbjct 59952 TCTGAATGGATGTTTTCCATCATGATCT-GAAACTTGTATACCAGTTGAGCCTCTGGTAT 60010
Query 13510 CTGAACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAGCAGC 13569
|| ||||| | | || |||| | ||||| || || || || || || |||||
Sbjct 60011 TTGTACTTCAGCACAGAAATTTTCCACCAAGTTCTCATTGACAATACCATCCGAGGCAGC 60070
Query 13570 aaaaaaaGC 13578
||| || ||
Sbjct 60071 AAAGAATGC 60079
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430977714682584
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |