Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20dubliniensis_20[genbank_20GCA_5F000647575.1_202014-04-23]
892 sequences; 13,998,205 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq2 118 3e-21
seq243 116 1e-20
>seq2
Length=135431
Score = 118 bits (130), Expect = 3e-21
Identities = 306/460 (67%), Gaps = 15/460 (3%)
Strand=Plus/Minus
Query 22499 TTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTTTGGC 22558
|||| ||||||| |||||||| || || || ||| | ||| ||||| || |||
Sbjct 59796 TTGCGTTTGCTGCCGTTGAAGGTATATTTTTCAGTGGTTCGTTTGCAGCAATTTTCTGGT 59737
Query 22559 TaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAGATG 22618
|||| ||| | | | ||||| || | || ||||| ||||| || ||| ||||||| |
Sbjct 59736 TAAAGAAAAGGGGGTTGATGCCAGGATTGACATTTTCGAATGAATTGATTTGCCGAGACG 59677
Query 22619 AGGGTCTTCATACCGATTTTGCGTGTATGCTATA-TCGGAATCATATCATTCATAAACTT 22677
| || |||| || |||| ||| ||| || ||| ||| | | | | || || |||
Sbjct 59676 AAGGGATTCACACGGATTATGCCTGTTTGTTATTCTCGTATTTAAAGAATA---AACCTT 59620
Query 22678 CCATATGAAACTGTACTTGATA---TTATTACAAATGCAGTTGAACTTGAACGTCTATTT 22734
| | |||| | |||| | | ||||| | || || |||| | | |
Sbjct 59619 CTCCA-GAAA---TCATTGAGAAAATCATTACCGAGGCTGTGACTATTGA--GAAAAAAT 59566
Query 22735 ATTT--GCGAGGCGTTACCAGTAAGTCTCATTGGTATCAATGCCGAATCAATGAGTACAT 22792
|||| |||| ||| | |||||| | | | || || ||| || | ||| | |
Sbjct 59565 ATTTCAGCGATGCGCTTCCAGTATCTTTATTGGGAATGAATTGTGACTTGATGTGCCAGT 59506
Query 22793 ATATTAAATTTGTTGCAGATCGTCTATTAATTTCACTCGGTTATGCAAAGCATTATAACG 22852
|| || |||||||||| ||||| ||||| | | | || || |||| |||| || |
Sbjct 59505 ATGTTGAATTTGTTGCTGATCGATTATTAGTGGCCTTTGGAAATAAAAAGTATTACAATG 59446
Query 22853 TCGTTAATCCATTTGAATGGATGGAACTTATTTCACTTGAAGGAAAGACCAATTTCTTCG 22912
| |||||||||||| | |||||| ||| || | | || || || |||||||| |
Sbjct 59445 TTACTAATCCATTTGATTTCATGGAAAATATCTCCTTGGCTGGTAAAACTAATTTCTTTG 59386
Query 22913 AAAAAAGAGTTGGTGAATACCAAAAAGCAGGTGTTATGGA 22952
|||| |||||| ||| |||||||| || ||||| |||||
Sbjct 59385 AAAAGAGAGTTTCTGATTACCAAAAGGCCGGTGTAATGGA 59346
>seq243
Length=19219
Score = 116 bits (128), Expect = 1e-20
Identities = 481/745 (65%), Gaps = 24/745 (3%)
Strand=Plus/Minus
Query 22219 GCATTCTTTGCTACCGCAGACGGTATAGTTTTTGAGAATCTAGTGACTAATTTTGCATCT 22278
||||| || ||| | | || ||||| ||| ||| || || | || || | ||
Sbjct 9552 GCATTTTTCGCTGCTTCTGATGGTATTGTTGGTGAAAACTTAATTGAAAACTTCTCGACT 9493
Query 22279 GAAATTCAATACCCAGAGGCCAGATGTTTCTATGGTGTGCAAATGATGATTGAAAATGTT 22338
||| ||||| || || |||| || ||||| ||| | ||||| ||||| ||||| ||
Sbjct 9492 GAAGTTCAACTTCCCGAAGCCAAATCATTCTACGGTTTCCAAATCATGATGGAAAACATT 9433
Query 22339 CACGCGGAAACATATTCTATGATGCTACAGTCACTCGTAGAAGATAAAGACGAACAACGA 22398
|| | ||||| || ||| | | | | | | || ||||| | ||| |||
Sbjct 9432 CATTCAGAAACCTACTCTTTATTAATTGAAACTTACATAAAAGATCCTCAAGAAGC-CGA 9374
Query 22399 A-ACTTATTCCGCGCGATTCGCACCATTCAATCAATTAAGAATAAGGCAGATTGGGCGCT 22457
||||||| || ||| || |||| || ||| | || || || || ||||| |
Sbjct 9373 TTACTTATTTAATGCCATTGCCAATATTCCATGTATTCAAAAGAAAGCTGACTGGGCTAT 9314
Query 22458 GAAATGGATG-AACA--ATGAACGTTCATTCGCGGAACGTCTTATTGCATTTGCTGTGGT 22514
|||||||| || | ||||| | | | ||| | | |||| ||||||| ||
Sbjct 9313 CAAATGGATTCAAGATGATGAAGCCTTGTATGGTGAAAGATTAGTTGCCTTTGCTGCAGT 9254
Query 22515 TGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTTTGGCTaaaaaaaCGTGCAAT 22574
|||||| ||||||||| ||| ||||| | | ||||| ||| | ||||| | | |
Sbjct 9253 TGAAGGTATTTTCTTTAGTGGTTCATTTGCTTCTATCTTCTGGTTGAAAAAGAGAGGTTT 9194
Query 22575 TATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAGATGAGGGTCTTCATACCGA 22634
||||| || | || || ||||| ||||| ||| || ||||||| ||| | || || ||
Sbjct 9193 AATGCCAGGGTTGACTTTCTCAAACGAGTTGATTTGCAGAGATGAAGGTTTACACACTGA 9134
Query 22635 TTTTGCGTGTATGCTATATCGGAATCATATCATTCATAAACTTCCATAT---GAAACTGT 22691
||||| ||| | | | | |||| | || || |||| | || | |||
Sbjct 9133 CTTTGCTTGTTTATTGTTTGC---TCATTTG---CAAAACAGACCATCTCCAGAGATTGT 9080
Query 22692 ACTTGATATTATTACAAATGCAGTTGAACTTGA--ACGTCTATTTATTTGCGAGGCGTTA 22749
| |||||||| | || ||||| |||| | | || || | ||| || |
Sbjct 9079 TGAAAAAATTATTACTGAAGCTGTTGATGTTGAGAAAGAGTACTT--TACCGATGCTCTT 9022
Query 22750 CCAGTAAGTC--TCATTGGTATCAATGCCGAATCAATGAGTACATATATTAAATTTGTTG 22807
||||| ||| | | ||||| || | | ||| || ||| ||| |||| || |
Sbjct 9021 CCAGT--GTCCTTGTTGGGTATGAACTGTAACTTGATGTGTCAATACATTGAATTCGTCG 8964
Query 22808 CAGATCGTCTATTAATTTCACTCGGTTATGC-AAAGCATTATAACGTCGTTAATCCATTT 22866
| ||| | | || | | | ||| | |||| || | || || ||||||||||
Sbjct 8963 CTGATAGATTGTTGTTGGCCTTAGGTAACAAGAAAGTAT-ACAATGTTACTAATCCATTT 8905
Query 22867 GAATGGATGGAACTTATTTCACTTGAAGGAAAGACCAATTTCTTCGAAAAAAGAGTTGGT 22926
|| | |||||| ||||| | | || |||||||||||||| ||||||||||||
Sbjct 8904 GATTTCATGGAAAACATTTCTTTGGCTGGTAAGACCAATTTCTTTGAAAAAAGAGTTTCA 8845
Query 22927 GAATACCAAAAAGCAGGTGTTATGG 22951
|| ||||||||||| ||||||||||
Sbjct 8844 GACTACCAAAAAGCTGGTGTTATGG 8820
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303338704297544
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |