Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20dubliniensis_20[genbank_20GCA_5F000647575.1_202014-04-23]
892 sequences; 13,998,205 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq243 262 4e-65
seq2 156 5e-33
>seq243
Length=19219
Score = 262 bits (290), Expect = 4e-65
Identities = 611/910 (67%), Gaps = 35/910 (4%)
Strand=Plus/Plus
Query 92790 CATAACACCACATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTC 92849
|||||||||| ||||||||| || |||| |||||||||||||||| ||||| || |
Sbjct 8821 CATAACACCAGCTTTTTGGTAGTCTGAAACTCTTTTTTCAAAGAAATTGGTCTTACCAGC 8880
Query 92850 CAAAGATATCGAATTCACT---AGTGATTGGATTCTTGGCGTTATAATACTTT----TCA 92902
|||||| || | ||| | | | |||||| | | || || |||||| | |
Sbjct 8881 CAAAGAAAT-GTTTTCCATGAAATCAAATGGATTAGTAACATTGTA-TACTTTCTTGTTA 8938
Query 92903 CCGATCAACTCGTACAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCA 92962
|| | | | |||| ||||||||||| || ||||| ||||| ||| ||||||| | |
Sbjct 8939 CCTA---AGGCCAACAACAATCTATCAGCGACGAATTCAATGTATTGACACATCAAGTTA 8995
Query 92963 CAATTCATTCCTAGAA--GACGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTA 93020
|| ||||| || | | ||| || || ||||| ||||| ||| | |||||||| |
Sbjct 8996 CAGTTCATACCCAACAAGGAC--ACTGGAAGAGCATCGGTAAAGTACTCTTTCTCAACAT 9053
Query 93021 CAACGGCTTCTTTCAAGATTTCTATTACTCTACTATTTGG---TGGTTTTTGTACGACAT 93077
|||| ||||| | | |||| | || | | | ||| |||| | | | | ||
Sbjct 9054 CAACAGCTTCAGTAATAATTTTTTCAAC---AATCTCTGGAGATGGTCTGTTTTGCAAAT 9110
Query 93078 AATTGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCAT 93137
| ||| ||| || |||||||| || ||||||||||| |||| | |||||||| |
Sbjct 9111 GAGCAAACAATAAACAAGCAAAGTCAGTGTGTAAACCTTCATCTCTGCAAATCAACTCGT 9170
Query 93138 TGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAAC 93197
| ||| || || ||||| | | |||| || || | ||| || || ||||||||
Sbjct 9171 TTGAGAAAGTCAACCCTGGCATTAAACCTCTCTTTTTCAACCAGAAGATAGAAGCAAATG 9230
Query 93198 TACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTG 93257
|||| ||| || |||||||| || || ||||| || || | | ||| || | |
Sbjct 9231 AACCACTAAAGAAAATACCTTCAACTGCAGCAAAGGCAACTAATCTTTCACCATACAAGG 9290
Query 93258 CGGAATTACTGCTG-ATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGT 93316
| || | | || |||||||| | |||||| || ||||| || | |||||| || |
Sbjct 9291 CTTCATCA-TCTTGAATCCATTTGATAGCCCAGTCAGCTTTCTTTTGAATACATGGAATA 9349
Query 93317 GTTTCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATT 93376
| | || || ||||||| |||||| || | | |||| |||||| || || |||
Sbjct 9350 TTGGCAATGGCATTAAATAAGTAATCGGCTTCTTGAGGATCTTTTATGTAAGTTTCAATT 9409
Query 93377 AACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACAT 93436
|| | ||| || |||| ||||| | || ||||| |||||||| |||||||| ||
Sbjct 9410 AATAAAGAGTAGGTTTCTGAATGAATGTTTTCCATCATGATTTGGAAACCGTAGAATGAT 9469
Query 93437 CTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATA 93496
| ||||| | | || ||||| || || | || | | |||||| || |||
Sbjct 9470 TTGGCTTCGGGAAGTTGAACTTCAGTCGAGAAGTTTTCAATTAAGTTTTCACCAACAATA 9529
Query 93497 CCATCGGATGCTGCaaaaaaaGCCAATATATGCTTT----ATAAAATGTTTCTCATCATC 93552
||||| || || || ||||| ||||||| || | | ||||| | | |||| ||
Sbjct 9530 CCATCAGAAGCAGCGAAAAATGCCAATA----CTCTAGAGACAAAATATCTTTCATTTTC 9585
Query 93553 TTTAA---GCTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCA 93609
|| | |||| ||| || | |||||| | ||||| ||||||| | |||||
Sbjct 9586 ATTCAATTTGTTATTCCAGTCATCCAAATCTTTACTCAAATCGATTTCTTCGGCGGTCCA 9645
Query 93610 AAACGATGCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATAT 93669
|| || ||||| ||||| || || | | ||| || || || ||| ||||| || ||
Sbjct 9646 GAAAGAAGCTTCAGCTTTCTTATAAAAGTTCCAAATTTCATGGTATCTGATTGGGAACAT 9705
Query 93670 GACAAAACGA 93679
||| |||||
Sbjct 9706 CACATAACGA 9715
>seq2
Length=135431
Score = 156 bits (172), Expect = 5e-33
Identities = 579/901 (64%), Gaps = 35/901 (4%)
Strand=Plus/Plus
Query 92790 CATAACACCACATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTC 92849
||| ||||| |||||||| || |||| | |||||||||||||| || || || |
Sbjct 59348 CATTACACCGGCCTTTTGGTAATCAGAAACTCTCTTTTCAAAGAAATTAGTTTTACCAGC 59407
Query 92850 CAA--AGATATC------GAATTCACTAGTGATTGGATTCTTGGCGTTATAATACTTTTC 92901
||| |||||| ||| ||| | |||||| | | || ||||||||||
Sbjct 59408 CAAGGAGATATTTTCCATGAAATCA------AATGGATTAGTAACATTGTAATACTTTTT 59461
Query 92902 ACCGATCAACTCGTACAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATC 92961
| || | ||||||| |||||| |||||||| | ||||| ||||||| ||
Sbjct 59462 ATTTCCAAAGGCCACTAATAATCGATCAGCAACAAATTCAACATACTGGCACATCAAGTC 59521
Query 92962 ACAATTCATTCCTAGAAGACGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTAC 93021
|||||||||||| | | | ||| || || || ||| | || | | |||||| ||
Sbjct 59522 ACAATTCATTCCCAATAAAGATACTGGAAGCGCATCGCTGAAATATTTTTTCTCAATAGT 59581
Query 93022 AACGGCTTCTTTCAAGATTTCTATTACTCTACTATTT-----GGTGGTTTTTGTACGACA 93076
|| || || | | ||||| ||| | |||| | ||||| | | |
Sbjct 59582 CACAGCCTCGGTAATGATTTT-----CTCAATGATTTCTGGAGAAGGTTTATTCTTTAAA 59636
Query 93077 TAATTGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCA 93136
|| | | | || || ||| | || || || | ||||||||||| | ||||| |||
Sbjct 59637 TACGAGAATAACAAACAGGCATAATCCGTGTGAATCCCTTCGTCTCGGCAAATCAATTCA 59696
Query 93137 TTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAA 93196
|| ||||| || ||||| | || || | |||||| | ||| || |||| |||||
Sbjct 59697 TTCGAAAATGTCAATCCTGGCATCAACCCCCTTTTCTTTAACCAGAAAATTGCTGCAAAC 59756
Query 93197 CTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTT 93256
|||| |||||||||||||| ||||| ||||| || || | | || ||| |
Sbjct 59757 GAACCACTGAAAAATATACCTTCAACGGCAGCAAACGCAACCAATCTCTCAGCATACAAA 59816
Query 93257 GCGGAAT--TACTGCTG-ATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGT 93313
|| || | | || ||||| | | |||||||||||||||| | || | ||
Sbjct 59817 GC---ATCCTCGTCTTGAATCCACCTGATGGCCCAATCGGCTTTTTCTCTGATGAATGGG 59873
Query 93314 AGTGTTTCGATAGCGTTAAATAGGTAATCTCGC-TCGTCCGAATCTCGTATGTATGTATC 93372
| |||| ||||| ||||| | | || ||| || || | || | |||||| ||
Sbjct 59874 ATATTTTCAATAGCATTAAACAAAAAGTC-CGCTTCTTCTGGGTCCTTGAAGTATGTTTC 59932
Query 93373 GATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAA 93432
|||||||| ||||| | || ||||||| || ||||| || || || ||| |
Sbjct 59933 GATTAACAACGAATAAGTCTCTGAATGGATGTTTTCCATCATGATCTGAAACTTGTATAC 59992
Query 93433 ACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGAC 93492
| ||| || | || || ||||| | | || | || || | || ||||||||
Sbjct 59993 CAGTTGAGCCTCTGGTATTTGTACTTCAGCACAGAAATTTTCCACCAAGTTCTCATTGAC 60052
Query 93493 TATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATC 93552
|||||||| || || ||||| || ||||| | | || ||| | | |||| ||
Sbjct 60053 AATACCATCCGAGGCAGCAAAGAATGCCAACACTCGGGAGATGAAAAATCTTTCATTTTC 60112
Query 93553 TTTAAGCTTA---TCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCA 93609
|| | ||| | ||| |||| | |||||| | || | ||||| | |||||
Sbjct 60113 GTTCATTTTATTGTTCCAGTCGGCCAAATCTTTACTTAAGTCAAGCTCTTCAGCTGTCCA 60172
Query 93610 AAACGATGCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATAT 93669
|||||| || | |||||||| | | ||||| || |||| | ||| ||| ||||
Sbjct 60173 AAACGAGGCCAACGACTTTTTGTAGAATTGCCATAACTCCGGATACTTAATAGGATATAT 60232
Query 93670 G 93670
|
Sbjct 60233 G 60233
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556854591002080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |