Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20dubliniensis_20[genbank_20GCA_5F000647575.1_202014-04-23] 892 sequences; 13,998,205 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq57 96.9 3e-15 >seq57 Length=48952 Score = 96.9 bits (106), Expect = 3e-15 Identities = 162/235 (69%), Gaps = 16/235 (7%) Strand=Plus/Plus Query 20357 ACATAAAATTGACATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGG 20416 |||||||||||||| || | ||||| || || | ||||| | || || | || Sbjct 17214 ACATAAAATTGACAAAATACATGACATGGAGGTAATGCCATTTTAGCAAAATCTGGTGGA 17273 Query 20417 TTCCACGCACACATAATGATTCTTCTATCGTGCGGATT--------ATTTTTTATTAAAT 20468 ||||| ||| |||| || ||||||||||| | ||||| |||||||| ||| Sbjct 17274 TTCCAAGCAGACATGATAATTCTTCTATCATAAGGATTTGTTTTCAATTTTTTAATAA-- 17331 Query 20469 CCACAATGTACGACAATTGGTCAAACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACGT 20528 || |||| | || ||||| || ||||| |||| |||| ||| || | Sbjct 17332 -CATCTTGTA-----ACTGATCAAATCCTTGGCCACTATAATCAGAATCACAATCTTTAT 17385 Query 20529 ACGCCGCCCCAAAGTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCCCTC 20583 | | || ||||| || ||||| |||||||| ||||| |||||||||||||| || Sbjct 17386 ATTCTGCACCAAAATGTCTCCATTGGAAACCATAAACTGGTCCCAAATCCCCTTC 17440 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441367878693280