Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20dubliniensis_20[genbank_20GCA_5F000647575.1_202014-04-23]
892 sequences; 13,998,205 total letters
Query= NC_009333.1
Length=137969
Score E
Sequences producing significant alignments: (Bits) Value
seq57 96.9 3e-15
>seq57
Length=48952
Score = 96.9 bits (106), Expect = 3e-15
Identities = 162/235 (69%), Gaps = 16/235 (7%)
Strand=Plus/Plus
Query 20357 ACATAAAATTGACATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGG 20416
|||||||||||||| || | ||||| || || | ||||| | || || | ||
Sbjct 17214 ACATAAAATTGACAAAATACATGACATGGAGGTAATGCCATTTTAGCAAAATCTGGTGGA 17273
Query 20417 TTCCACGCACACATAATGATTCTTCTATCGTGCGGATT--------ATTTTTTATTAAAT 20468
||||| ||| |||| || ||||||||||| | ||||| |||||||| |||
Sbjct 17274 TTCCAAGCAGACATGATAATTCTTCTATCATAAGGATTTGTTTTCAATTTTTTAATAA-- 17331
Query 20469 CCACAATGTACGACAATTGGTCAAACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACGT 20528
|| |||| | || ||||| || ||||| |||| |||| ||| || |
Sbjct 17332 -CATCTTGTA-----ACTGATCAAATCCTTGGCCACTATAATCAGAATCACAATCTTTAT 17385
Query 20529 ACGCCGCCCCAAAGTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCCCTC 20583
| | || ||||| || ||||| |||||||| ||||| |||||||||||||| ||
Sbjct 17386 ATTCTGCACCAAAATGTCTCCATTGGAAACCATAAACTGGTCCCAAATCCCCTTC 17440
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 441367878693280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |