Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20dubliniensis_20[genbank_20GCA_5F000647575.1_202014-04-23]
892 sequences; 13,998,205 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq38 141 1e-28
seq31 120 4e-22
seq90 82.4 9e-11
>seq38
Length=58422
Score = 141 bits (156), Expect = 1e-28
Identities = 884/1399 (63%), Gaps = 49/1399 (4%)
Strand=Plus/Plus
Query 113954 GTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATG 114013
|||||||| || || ||||||||||||||||| ||||| | || || || || |||||
Sbjct 21551 GTGTATGGTTCGAAACACTCATTGTTACCCAAAATTTGTGATGTAGAAGCAGTAGGCATT 21610
Query 114014 GGTGCCA-TGAGAAGGCTGTTACGGAGACCCT--TTTCCCTAATGCGTTCCTTGAGGGCG 114070
|| || | | | |||| ||| | | ||| | || || ||| || || | |
Sbjct 21611 GGAGCAACTAATAAGGA-GTTTCTCATACCATGCTTAGCCAAATT--TTGTTTTAATGTA 21667
Query 114071 TCCCAGTCG--TAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTT 114128
||||| || || || || ||| | | | ||| | ||||||||| | | |||||
Sbjct 21668 TCCCAATCCCATAATTCAG--TTGGTTTTCTGTTCCATAAATCAAACTGTAATAAACCTT 21725
Query 114129 GGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAATTC----G 114184
| ||||| || || || | | || ||||| | || || | | |||||||| |
Sbjct 21726 GAGAGGCAGGGGAGCCTGGATAAGTTTCGTAGGCACCTTCTTCTTTAGCCAATTCAACAG 21785
Query 114185 GAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTG 114244
|||| || | || || || || || ||||| ||||| || || | | | ||
Sbjct 21786 AAGCT----TCAACAGCAGCATGGTAAATAGTCTCGAAAATTTGAATGTTTAATTCTCTG 21841
Query 114245 GCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACA 114304
|| || | ||| ||||| | | || | ||||| |||| || | |||||| |||
Sbjct 21842 GCTTCTTGGGAGTCAAATGGTAATCTCAATTCCATAAAGGCATCAGCCAAACCTTGAACA 21901
Query 114305 CCGAGGCCAATTGGGCGATGTCTCATATTAGA-CTTTCGAGCGGTCTCCA-CGGGATAAA 114362
|| | ||||||| | ||||||||||| || |||||| || ||| | | || |||
Sbjct 21902 CCCAAAGCAATTGGTCTGTGTCTCATATTTGATCTTTCG-GCT-TCTGGAACTGGGTAAT 21959
Query 114363 AATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCT 114422
|| | || ||||| || || | || |||||| ||||| |||| ||||| | ||
Sbjct 21960 GGTTGCGGTCAATAACTCTGTTCAAGTTACGGGTGACTACCTTGGTGACATCATGTAACT 22019
Query 114423 TTTCGTAATCAAAACTG---CGAGTCTCTTCATTGA---CAT---ACTTAGGAAGG---- 114469
| |||||| || | ||| | | | |||| | | || | || ||
Sbjct 22020 T------ATCAAAGTTGTACCAAGTAT-TACTTTGATCGCTTTCAACAAATGATGGTAAA 22072
Query 114470 GCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCC 114529
|| || || |||| ||||| |||| | ||||| | ||| || || | ||||||
Sbjct 22073 GCAATGGAGGCCAAGTTACAAACAGCGACTTCATCTGGAGCAGAATATTCAACAATTTCA 22132
Query 114530 GTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACAC 114589
||| || || ||| ||||| | |||||||||||||| || || || |||||||
Sbjct 22133 CAACATAAGTTGGAAGATTTAATAATACCCAAGTTCTTTTGGTTGGATTTGTTGTTACAT 22192
Query 114590 GCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTC 114649
| ||| ||||| | ||| |||| || ||||| || ||||||| | ||||| | |
Sbjct 22193 GAATCTTTGTACAACATAAATGGAGTACCCGTTTCTGTTTGGGCTCCCAAGATAGCGTAC 22252
Query 114650 CAGACATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAG 114709
|| | | ||| | || || | || || | ||||| | || ||
Sbjct 22253 CACAATTTTTGGGCCTTGATGGTCTGTCTGCCACGGTTTTCTTTTTCGTATCTGGTATAT 22312
Query 114710 AGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAG 114769
| |||| || || ||||| | || | | ||||| |||| || ||| ||||
Sbjct 22313 AATTCTTCGAATTCGTCACCGTAAACATCAGCCAAACCTGGGGCCTCATTTGGTGAGAAC 22372
Query 114770 AGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCT 114829
| || ||| | ||| | || || | |||||||| | |||||| ||||| | ||||
Sbjct 22373 AAAGTCCAATCACCGTTTTGTTCGACTCTTTTCATGAACAAGTCTGGAATCCATAAAGCT 22432
Query 114830 GAGAAGAGATC-CCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAA 114888
| ||| | ||| | | | || |||||| | || ||||| | | || | ||
Sbjct 22433 GGGAACAAATCTCTGGCTCTGA-TTTCTTCTTTACCATGATTCTTTCTGATGTCAATGAA 22491
Query 114889 GTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACC---CCTTACGAC 114944
|| | ||| || |||||| ||||| | ||||| || | | ||| ||| |
Sbjct 22492 ATCAAAGATGTCACTGTGCCATGGTTCTAAGTACAAGGCAAAGGCACCAGGTCTTTTG-T 22550
Query 114945 GACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATAC 115004
|||| | || | ||||| | || ||| ||| || || | | ||||||||| ||||
Sbjct 22551 TACCACCTTGATCAACATAACGTGCAGTGTTATTGAACACTCTTACCATTGGAATAATAC 22610
Query 115005 CATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCATGGATGT 115064
||| ||| ||||| || || ||| || | | | | | | ||||| |
Sbjct 22611 CATTAGAAGTACCATTGGTACCAGCAATGTAAGCACCAGTAGAACGAATGTTGTGGATAT 22670
Query 115065 GCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGA 115124
| | |||||| || ||||| | ||||| || || ||| | | | | | || |
Sbjct 22671 GTAAACCAATCCCTCCTGCACTTTTTGAAATCAAAGCACACGATTTTAAAGTATCATATA 22730
Query 115125 TCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTTG 115184
| || || || || ||| |||| | || | | |||||| |||||||| || ||||
Sbjct 22731 TACCTTCAATAGAATCATCCTTCATAGCAAGCAAGAAGCATGAAGACATTTGGGGTCTTG 22790
Query 115185 GTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTAT 115244
|||||||||| ||||| | | || | | ||| | || | | ||| |||||| |
Sbjct 22791 GTGTACCAGCATTGAACAAGCAAGGAGAACCATGGGTAAAGAATCTTTGAGACATCAAGT 22850
Query 115245 CGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAA 115304
||||| || | ||| || || || | ||||| ||||| | | ||| | ||| |
Sbjct 22851 TATAGGTTTCAATGACTCTTGGTATATCATTACCGTGGATACCAACAGCGACTCTCATGA 22910
Query 115305 ACATGTATTGGGGTGTTTC 115323
|| | ||||||| ||||
Sbjct 22911 TCAAATGTTGGGGTCTTTC 22929
>seq31
Length=62326
Score = 120 bits (132), Expect = 4e-22
Identities = 354/540 (66%), Gaps = 12/540 (2%)
Strand=Plus/Minus
Query 114103 CCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGG 114162
||||||||||||||| | || || | || || ||||| |||| ||||| || |||||
Sbjct 2112 CCACATATCAAACTGTAATATCCCATTTGATGCCGGCGAGCCCTGGAATGTTTCATATGG 2053
Query 114163 GCCCTCAACCTCCGCCAATTCGGAGCTC--GCCTCGAGGGCTGCGTGATACATTGTCTCA 114220
|||||| | |||||||| | || ||||| || || || || || || || |||
Sbjct 2052 GCCCTCTTTCATTGCCAATTC--AACTGAGGCCTCAAGTGCAGCATGGTATATAGTTTCA 1995
Query 114221 AAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATA 114280
|| || || ||| | || || ||| | |||||||| | | ||| | | |
Sbjct 1994 AATATCTGAATATTTAATGTTTTAGCCATTGCAGAATCAAAAGGTAATCGAAGCTCAGCA 1935
Query 114281 AATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTT 114340
|| | ||| || | ||||| ||||| | ||||||| || |||||| |||| || | |
Sbjct 1934 AACAAATCTGCCAAGCCTTGTACACCCAAAGCAATTGGACGGTGTCTCTTATTTGAATAT 1875
Query 114341 CGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACA 114400
|| || | || ||||| | ||| || || | || | ||| | || |
Sbjct 1874 TCTGCCGTTTTAACAGGATATTTTGTTACATCAATCACTTTGTTCAAATTCCTTGTCAAG 1815
Query 114401 ACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAA---ACTGCGAGTCTCTTCA---TTG 114454
|| || |||| || | ||||| ||||||| | || | |||| ||
Sbjct 1814 ACTTTGGTGACAGAGTGCAATTTTTCAAAATCAAATGCAATGGCATCCTCTGTGGTTTTC 1755
Query 114455 ACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCA-GT 114513
| ||| |||| | || | ||||| | ||| ||||||| || || || | | | |
Sbjct 1754 AAATATGTAGGCAATGCAAGAGACGCTAAATTGCACACAGCAGTTTCTTC-TGGTGATGA 1696
Query 114514 GTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATT 114573
|| || | |||||| ||||||||||||| ||| || || || | ||| ||||| ||
Sbjct 1695 ATATTCAACAATTTCGCAACACAAATTTGAAGACTTTATTGTCCCGATGTTTTTTTGGTT 1636
Query 114574 TGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGA 114633
||| ||||||||||| || || ||||| ||||| || || || || || ||||| ||
Sbjct 1635 TGATTTTGTGTTACAGGCGTCTTTGTATAGCATATAAGGACCACCTGTTTCAGTTTGAGA 1576
>seq90
Length=39169
Score = 82.4 bits (90), Expect = 9e-11
Identities = 140/202 (69%), Gaps = 7/202 (3%)
Strand=Plus/Minus
Query 10874 TCAAAGCCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCGCGTTCATCATTCGCG 10933
||||| |||||||| || ||| | |||||| | ||| ||| ||||||||||| ||
Sbjct 37921 TCAAACCCATCCATTTCTACCAACAATTGATTCAATGTTGTTTCACGTTCATCATTGGCA 37862
Query 10934 -----GGCATACCACCCGCACTGCGTTGCTTACCGACGGCGTCAATTTCATCGATGAAAA 10988
||||| || | | | ||||| ||||| | || || |||||||| | || |
Sbjct 37861 CCAGTGGCATTCCCCTTGGAA--CGTTGTTTACCAATAGCATCGATTTCATCAACAAACA 37804
Query 10989 CGATACACGGTTGATTTTCACGGGCAACTTCAAAGATATCTCGGACTCTCTTGGCACCGA 11048
| || | || ||||||||| ||| | ||| | ||| || ||||| || || |
Sbjct 37803 CAATCGAAGGGGCATTTTCACGTGCAGTCTTAAATAAATCACGAACTCTAGATGCTCCAA 37744
Query 11049 CACCCACAAACATTTCCACAAA 11070
|||| ||||||||||| |||||
Sbjct 37743 CACCAACAAACATTTCTACAAA 37722
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597346939507360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |